RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 ERCC2P18074 760 aa15.56■□□□□ 0.08
PNKP-204ENST00000594661 CDH3P22223 829 aa15.56■□□□□ 0.08
PNKP-204ENST00000594661 ARPP19P56211 112 aa15.56■□□□□ 0.08
PNKP-204ENST00000594661 EIF4EBP2Q13542 120 aaPredicted RBP15.56■□□□□ 0.08
PNKP-204ENST00000594661 RTP2Q5QGT7 225 aa15.56■□□□□ 0.08
PNKP-204ENST00000594661 BTBD8Q5XKL5 378 aa15.56■□□□□ 0.08
PNKP-204ENST00000594661 TMEM214Q6NUQ4 689 aaKnown RBP15.56■□□□□ 0.08
PNKP-204ENST00000594661 RSPO2Q6UXX9 243 aaPredicted RBP15.56■□□□□ 0.08
PNKP-204ENST00000594661 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.56■□□□□ 0.08
PNKP-204ENST00000594661 ALYREFQ86V81 257 aaKnown RBP15.56■□□□□ 0.08
PNKP-204ENST00000594661 MCUQ8NE86 351 aa15.56■□□□□ 0.08
PNKP-204ENST00000594661 SLC44A1Q8WWI5 657 aa15.56■□□□□ 0.08
PNKP-204ENST00000594661 HTR3CQ8WXA8 447 aa15.56■□□□□ 0.08
PNKP-204ENST00000594661 BHMTQ93088 406 aa15.56■□□□□ 0.08
PNKP-204ENST00000594661 PRPF18Q99633 342 aaKnown RBP15.56■□□□□ 0.08
PNKP-204ENST00000594661 ABCC13Q9NSE7 274 aa15.56■□□□□ 0.08
PNKP-204ENST00000594661 OSER1Q9NX31 292 aa15.56■□□□□ 0.08
PNKP-204ENST00000594661 SFMBT1Q9UHJ3 866 aa15.56■□□□□ 0.08
PNKP-204ENST00000594661 NUDT5Q9UKK9 219 aa15.56■□□□□ 0.08
PNKP-204ENST00000594661 PCDHGB4Q9UN71 923 aa15.56■□□□□ 0.08
PNKP-204ENST00000594661 PCDHB5Q9Y5E4 795 aa15.56■□□□□ 0.08
PNKP-204ENST00000594661 PCDHGB5Q9Y5G0 923 aa15.56■□□□□ 0.08
PNKP-204ENST00000594661 HEMK1Q9Y5R4 338 aaPredicted RBP15.56■□□□□ 0.08
PNKP-204ENST00000594661 MAD1L1Q9Y6D9 718 aa15.56■□□□□ 0.08
PNKP-204ENST00000594661 MICAL3Q7RTP6 2002 aa15.55■□□□□ 0.08
PNKP-204ENST00000594661 IQANK1A0A1B0GTG1 560 aa15.55■□□□□ 0.08
PNKP-204ENST00000594661 A0A1W2PQH9 124 aa15.55■□□□□ 0.08
PNKP-204ENST00000594661 WDR91A4D1P6 747 aa15.55■□□□□ 0.08
PNKP-204ENST00000594661 HACD1B0YJ81 288 aa15.55■□□□□ 0.08
PNKP-204ENST00000594661 IRAK2O43187 625 aa15.55■□□□□ 0.08
PNKP-204ENST00000594661 MSI1O43347 362 aaKnown RBP15.55■□□□□ 0.08
PNKP-204ENST00000594661 SOAT2O75908 522 aa15.55■□□□□ 0.08
PNKP-204ENST00000594661 CRTAMO95727 393 aa15.55■□□□□ 0.08
PNKP-204ENST00000594661 ATP5BP06576 529 aaKnown RBP15.55■□□□□ 0.08
PNKP-204ENST00000594661 TFPTP0C1Z6 253 aa15.55■□□□□ 0.08
PNKP-204ENST00000594661 FAM58BPP0C7Q3 252 aa15.55■□□□□ 0.08
PNKP-204ENST00000594661 CBLBQ13191 982 aa15.55■□□□□ 0.08
PNKP-204ENST00000594661 GRAMD1BQ3KR37 738 aa15.55■□□□□ 0.08
PNKP-204ENST00000594661 TAS1R1Q7RTX1 841 aa15.55■□□□□ 0.08
PNKP-204ENST00000594661 GPR152Q8TDT2 470 aa15.55■□□□□ 0.08
PNKP-204ENST00000594661 SLC26A7Q8TE54 656 aa15.55■□□□□ 0.08
PNKP-204ENST00000594661 RNF34Q969K3 372 aa15.55■□□□□ 0.08
PNKP-204ENST00000594661 RANBP9Q96S59 729 aa15.55■□□□□ 0.08
PNKP-204ENST00000594661 KLF6Q99612 283 aaPredicted RBP15.55■□□□□ 0.08
PNKP-204ENST00000594661 TRIM62Q9BVG3 475 aa15.55■□□□□ 0.08
PNKP-204ENST00000594661 OSBPL10Q9BXB5 764 aa15.55■□□□□ 0.08
PNKP-204ENST00000594661 MRPL9Q9BYD2 267 aaKnown RBP15.55■□□□□ 0.08
PNKP-204ENST00000594661 OR12D3Q9UGF7 316 aa15.55■□□□□ 0.08
PNKP-204ENST00000594661 SOX13Q9UN79 622 aa15.55■□□□□ 0.08
PNKP-204ENST00000594661 NOX1Q9Y5S8 564 aa15.55■□□□□ 0.08
PNKP-204ENST00000594661 H3BNX3 289 aa15.55■□□□□ 0.08
PNKP-204ENST00000594661 MT-ND3P03897 115 aa15.55■□□□□ 0.08
PNKP-204ENST00000594661 DHRS4L1P0CG22 281 aa15.55■□□□□ 0.08
PNKP-204ENST00000594661 TPSB2P20231 275 aa15.55■□□□□ 0.08
PNKP-204ENST00000594661 EIF2B2P49770 351 aaKnown RBP15.55■□□□□ 0.08
PNKP-204ENST00000594661 ZBTB17Q13105 803 aa15.55■□□□□ 0.08
PNKP-204ENST00000594661 TPSAB1Q15661 275 aa15.55■□□□□ 0.08
PNKP-204ENST00000594661 SEPT7Q16181 437 aaKnown RBP15.55■□□□□ 0.08
PNKP-204ENST00000594661 ZNF829Q3KNS6 432 aaPredicted RBP15.55■□□□□ 0.08
PNKP-204ENST00000594661 PGM2L1Q6PCE3 622 aa15.55■□□□□ 0.08
PNKP-204ENST00000594661 DENND5BQ6ZUT9 1274 aa15.55■□□□□ 0.08
PNKP-204ENST00000594661 PRPF39Q86UA1 669 aaKnown RBP15.55■□□□□ 0.08
PNKP-204ENST00000594661 CTAGE3PQ8IX95 158 aa15.55■□□□□ 0.08
PNKP-204ENST00000594661 PEX5LQ8IYB4 626 aa15.55■□□□□ 0.08
PNKP-204ENST00000594661 CENPSQ8N2Z9 138 aa15.55■□□□□ 0.08
PNKP-204ENST00000594661 NPWQ8N729 165 aa15.55■□□□□ 0.08
PNKP-204ENST00000594661 DDHD1Q8NEL9 900 aa15.55■□□□□ 0.08
PNKP-204ENST00000594661 C8orf48Q96LL4 319 aa15.55■□□□□ 0.08
PNKP-204ENST00000594661 HAUS8Q9BT25 410 aa15.55■□□□□ 0.08
PNKP-204ENST00000594661 CCDC106Q9BWC9 280 aa15.55■□□□□ 0.08
PNKP-204ENST00000594661 UNKQ9C0B0 810 aaKnown RBP15.55■□□□□ 0.08
PNKP-204ENST00000594661 CRISPLD2Q9H0B8 497 aa15.55■□□□□ 0.08
PNKP-204ENST00000594661 SMOC2Q9H3U7 446 aa15.55■□□□□ 0.08
PNKP-204ENST00000594661 PRDM12Q9H4Q4 367 aa15.55■□□□□ 0.08
PNKP-204ENST00000594661 GIN1Q9NXP7 522 aa15.55■□□□□ 0.08
PNKP-204ENST00000594661 PLXNA3P51805 1871 aa15.54■□□□□ 0.08
PNKP-204ENST00000594661 C2orf71A6NGG8 1288 aa15.54■□□□□ 0.08
PNKP-204ENST00000594661 OR6C75A6NL08 312 aa15.54■□□□□ 0.08
PNKP-204ENST00000594661 FAM47E-STBD1D6RA91 191 aa15.54■□□□□ 0.08
PNKP-204ENST00000594661 F5H423 210 aaPredicted RBP15.54■□□□□ 0.08
PNKP-204ENST00000594661 LRIG2O94898 1065 aa15.54■□□□□ 0.08
PNKP-204ENST00000594661 VNN2O95498 520 aa15.54■□□□□ 0.08
PNKP-204ENST00000594661 SRGAP2BP0DMP2 458 aa15.54■□□□□ 0.08
PNKP-204ENST00000594661 ALDH1A3P47895 512 aa15.54■□□□□ 0.08
PNKP-204ENST00000594661 HCAR3P49019 387 aa15.54■□□□□ 0.08
PNKP-204ENST00000594661 KDSRQ06136 332 aa15.54■□□□□ 0.08
PNKP-204ENST00000594661 CDK18Q07002 472 aa15.54■□□□□ 0.08
PNKP-204ENST00000594661 C6orf183Q5T699 404 aa15.54■□□□□ 0.08
PNKP-204ENST00000594661 PAOXQ6QHF9 649 aa15.54■□□□□ 0.08
PNKP-204ENST00000594661 LPCAT2Q7L5N7 544 aa15.54■□□□□ 0.08
PNKP-204ENST00000594661 PPM1NQ8N819 430 aa15.54■□□□□ 0.08
PNKP-204ENST00000594661 PPP1R14CQ8TAE6 165 aa15.54■□□□□ 0.08
PNKP-204ENST00000594661 TCP10LQ8TDR4 215 aa15.54■□□□□ 0.08
PNKP-204ENST00000594661 ALKBH8Q96BT7 664 aaKnown RBP15.54■□□□□ 0.08
PNKP-204ENST00000594661 VWCEQ96DN2 955 aa15.54■□□□□ 0.08
PNKP-204ENST00000594661 P2RY11Q96G91 374 aa15.54■□□□□ 0.08
PNKP-204ENST00000594661 TMEM175Q9BSA9 504 aa15.54■□□□□ 0.08
PNKP-204ENST00000594661 CEP41Q9BYV8 373 aa15.54■□□□□ 0.08
PNKP-204ENST00000594661 CRISPLD1Q9H336 500 aa15.54■□□□□ 0.08
PNKP-204ENST00000594661 TRNAU1APQ9NX07 287 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms