RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 MMP20O60882 483 aa16.11■□□□□ 0.17
GTF2F1-203ENST00000594213 GFPT2O94808 682 aa16.11■□□□□ 0.17
GTF2F1-203ENST00000594213 TMCC1O94876 653 aa16.11■□□□□ 0.17
GTF2F1-203ENST00000594213 ZIC2O95409 532 aaPredicted RBP16.11■□□□□ 0.17
GTF2F1-203ENST00000594213 PLA2G2AP14555 144 aa16.11■□□□□ 0.17
GTF2F1-203ENST00000594213 ITIH2P19823 946 aa16.11■□□□□ 0.17
GTF2F1-203ENST00000594213 EEF1GP26641 437 aaKnown RBP16.11■□□□□ 0.17
GTF2F1-203ENST00000594213 RFC1P35251 1148 aaPredicted RBP16.11■□□□□ 0.17
GTF2F1-203ENST00000594213 KLK7P49862 253 aa16.11■□□□□ 0.17
GTF2F1-203ENST00000594213 C1orf61Q13536 156 aa16.11■□□□□ 0.17
GTF2F1-203ENST00000594213 PTK2BQ14289 1009 aa16.11■□□□□ 0.17
GTF2F1-203ENST00000594213 NR0B2Q15466 257 aa16.11■□□□□ 0.17
GTF2F1-203ENST00000594213 INO80DQ53TQ3 878 aaPredicted RBP16.11■□□□□ 0.17
GTF2F1-203ENST00000594213 CT47A1Q5JQC4 288 aaPredicted RBP16.11■□□□□ 0.17
GTF2F1-203ENST00000594213 TTC7BQ86TV6 843 aa16.11■□□□□ 0.17
GTF2F1-203ENST00000594213 PHACTR4Q8IZ21 702 aa16.11■□□□□ 0.17
GTF2F1-203ENST00000594213 TP53I13Q8NBR0 393 aaPredicted RBP16.11■□□□□ 0.17
GTF2F1-203ENST00000594213 KCNE4Q8WWG9 221 aa16.11■□□□□ 0.17
GTF2F1-203ENST00000594213 IL12RB2Q99665 862 aa16.11■□□□□ 0.17
GTF2F1-203ENST00000594213 C11orf70Q9BRQ4 267 aa16.11■□□□□ 0.17
GTF2F1-203ENST00000594213 LRRC61Q9BV99 259 aa16.11■□□□□ 0.17
GTF2F1-203ENST00000594213 TTYH3Q9C0H2 523 aa16.11■□□□□ 0.17
GTF2F1-203ENST00000594213 CPNE5Q9HCH3 593 aa16.11■□□□□ 0.17
GTF2F1-203ENST00000594213 THSD1Q9NS62 852 aa16.11■□□□□ 0.17
GTF2F1-203ENST00000594213 TAB2Q9NYJ8 693 aa16.11■□□□□ 0.17
GTF2F1-203ENST00000594213 APOBEC3BQ9UH17 382 aaKnown RBP16.11■□□□□ 0.17
GTF2F1-203ENST00000594213 HPCAL4Q9UM19 191 aa16.11■□□□□ 0.17
GTF2F1-203ENST00000594213 SATB2Q9UPW6 733 aa16.11■□□□□ 0.17
GTF2F1-203ENST00000594213 COL6A6A6NMZ7 2263 aa16.1■□□□□ 0.17
GTF2F1-203ENST00000594213 PMS2P1A4D2B8 440 aa16.1■□□□□ 0.17
GTF2F1-203ENST00000594213 ZSCAN5CA6NGD5 496 aaPredicted RBP16.1■□□□□ 0.17
GTF2F1-203ENST00000594213 CDRT15L2A8MXV6 281 aa16.1■□□□□ 0.17
GTF2F1-203ENST00000594213 PES1O00541 588 aaKnown RBP16.1■□□□□ 0.17
GTF2F1-203ENST00000594213 YY2O15391 372 aa16.1■□□□□ 0.17
GTF2F1-203ENST00000594213 TCEA3O75764 348 aa16.1■□□□□ 0.17
GTF2F1-203ENST00000594213 SOX5P35711 763 aa16.1■□□□□ 0.17
GTF2F1-203ENST00000594213 PDX1P52945 283 aa16.1■□□□□ 0.17
GTF2F1-203ENST00000594213 ADKP55263 362 aaKnown RBP16.1■□□□□ 0.17
GTF2F1-203ENST00000594213 TMPRSS3P57727 454 aa16.1■□□□□ 0.17
GTF2F1-203ENST00000594213 RHDQ02161 417 aa16.1■□□□□ 0.17
GTF2F1-203ENST00000594213 CFHR1Q03591 330 aa16.1■□□□□ 0.17
GTF2F1-203ENST00000594213 PRRT3Q5FWE3 981 aa16.1■□□□□ 0.17
GTF2F1-203ENST00000594213 LRRC73Q5JTD7 316 aa16.1■□□□□ 0.17
GTF2F1-203ENST00000594213 C6orf132Q5T0Z8 1188 aa16.1■□□□□ 0.17
GTF2F1-203ENST00000594213 BROXQ5VW32 411 aa16.1■□□□□ 0.17
GTF2F1-203ENST00000594213 TRIM72Q6ZMU5 477 aa16.1■□□□□ 0.17
GTF2F1-203ENST00000594213 MACC1Q6ZN28 852 aa16.1■□□□□ 0.17
GTF2F1-203ENST00000594213 RBM44Q6ZP01 1051 aaKnown RBP16.1■□□□□ 0.17
GTF2F1-203ENST00000594213 VPS36Q86VN1 386 aa16.1■□□□□ 0.17
GTF2F1-203ENST00000594213 PYROXD2Q8N2H3 581 aa16.1■□□□□ 0.17
GTF2F1-203ENST00000594213 FAM172AQ8WUF8 416 aa16.1■□□□□ 0.17
GTF2F1-203ENST00000594213 CASKIN2Q8WXE0 1202 aa16.1■□□□□ 0.17
GTF2F1-203ENST00000594213 DACH1Q9UI36 760 aa16.1■□□□□ 0.17
GTF2F1-203ENST00000594213 CHD5Q8TDI0 1954 aa16.09■□□□□ 0.17
GTF2F1-203ENST00000594213 RP1P56715 2156 aa16.09■□□□□ 0.17
GTF2F1-203ENST00000594213 TCRBV5S1A1TA0A578 114 aa16.09■□□□□ 0.17
GTF2F1-203ENST00000594213 WASH4PA8MWX3 477 aa16.09■□□□□ 0.17
GTF2F1-203ENST00000594213 NTN3O00634 580 aaPredicted RBP16.09■□□□□ 0.17
GTF2F1-203ENST00000594213 MUSKO15146 869 aa16.09■□□□□ 0.17
GTF2F1-203ENST00000594213 KLK10O43240 276 aa16.09■□□□□ 0.17
GTF2F1-203ENST00000594213 BUB1O43683 1085 aa16.09■□□□□ 0.17
GTF2F1-203ENST00000594213 TM7SF2O76062 418 aa16.09■□□□□ 0.17
GTF2F1-203ENST00000594213 KRT3P12035 628 aa16.09■□□□□ 0.17
GTF2F1-203ENST00000594213 TSHRP16473 764 aa16.09■□□□□ 0.17
GTF2F1-203ENST00000594213 EIF4A3P38919 411 aaKnown RBP16.09■□□□□ 0.17
GTF2F1-203ENST00000594213 RPIAP49247 311 aa16.09■□□□□ 0.17
GTF2F1-203ENST00000594213 THOP1P52888 689 aa16.09■□□□□ 0.17
GTF2F1-203ENST00000594213 POLR2FP61218 127 aaKnown RBP16.09■□□□□ 0.17
GTF2F1-203ENST00000594213 TMEM52BQ4KMG9 183 aa16.09■□□□□ 0.17
GTF2F1-203ENST00000594213 C3orf38Q5JPI3 329 aa16.09■□□□□ 0.17
GTF2F1-203ENST00000594213 ARHGAP40Q5TG30 622 aa16.09■□□□□ 0.17
GTF2F1-203ENST00000594213 CDKAL1Q5VV42 579 aa16.09■□□□□ 0.17
GTF2F1-203ENST00000594213 WDR59Q6PJI9 974 aa16.09■□□□□ 0.17
GTF2F1-203ENST00000594213 RTL3Q8N8U3 475 aaKnown RBP16.09■□□□□ 0.17
GTF2F1-203ENST00000594213 NETO2Q8NC67 525 aa16.09■□□□□ 0.17
GTF2F1-203ENST00000594213 TTC9Q92623 222 aa16.09■□□□□ 0.17
GTF2F1-203ENST00000594213 NAT6Q93015 286 aa16.09■□□□□ 0.17
GTF2F1-203ENST00000594213 GDAP1L1Q96MZ0 367 aa16.09■□□□□ 0.17
GTF2F1-203ENST00000594213 EPAS1Q99814 870 aa16.09■□□□□ 0.17
GTF2F1-203ENST00000594213 CPEB1Q9BZB8 566 aaKnown RBP16.09■□□□□ 0.17
GTF2F1-203ENST00000594213 LHX3Q9UBR4 397 aa16.09■□□□□ 0.17
GTF2F1-203ENST00000594213 COL27A1Q8IZC6 1860 aaPredicted RBP16.09■□□□□ 0.17
GTF2F1-203ENST00000594213 AHCTF1Q8WYP5 2266 aa16.08■□□□□ 0.17
GTF2F1-203ENST00000594213 TENM4Q6N022 2769 aa16.08■□□□□ 0.16
GTF2F1-203ENST00000594213 INSIG1O15503 277 aa16.08■□□□□ 0.16
GTF2F1-203ENST00000594213 ANXA6P08133 673 aa16.08■□□□□ 0.16
GTF2F1-203ENST00000594213 CELA2BP08218 269 aaPredicted RBP16.08■□□□□ 0.16
GTF2F1-203ENST00000594213 RBMS1P29558 406 aaKnown RBP16.08■□□□□ 0.16
GTF2F1-203ENST00000594213 PEX5P50542 639 aa16.08■□□□□ 0.16
GTF2F1-203ENST00000594213 YBEYP58557 167 aaPredicted RBP16.08■□□□□ 0.16
GTF2F1-203ENST00000594213 VAC14Q08AM6 782 aa16.08■□□□□ 0.16
GTF2F1-203ENST00000594213 SERINC3Q13530 473 aa16.08■□□□□ 0.16
GTF2F1-203ENST00000594213 CYTH1Q15438 398 aa16.08■□□□□ 0.16
GTF2F1-203ENST00000594213 KLHL40Q2TBA0 621 aa16.08■□□□□ 0.16
GTF2F1-203ENST00000594213 WSCD2Q2TBF2 565 aa16.08■□□□□ 0.16
GTF2F1-203ENST00000594213 CRTC1Q6UUV9 634 aa16.08■□□□□ 0.16
GTF2F1-203ENST00000594213 SLFN11Q7Z7L1 901 aa16.08■□□□□ 0.16
GTF2F1-203ENST00000594213 CLEC14AQ86T13 490 aa16.08■□□□□ 0.16
GTF2F1-203ENST00000594213 ZNF605Q86T29 641 aa16.08■□□□□ 0.16
GTF2F1-203ENST00000594213 PHF13Q86YI8 300 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms