RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 OR13H1Q8NG92 308 aa15.45■□□□□ 0.06
TRIM28-203ENST00000593582 ZNF564Q8TBZ8 553 aaPredicted RBP15.45■□□□□ 0.06
TRIM28-203ENST00000593582 HCAR2Q8TDS4 363 aa15.45■□□□□ 0.06
TRIM28-203ENST00000593582 CTNNBL1Q8WYA6 563 aaPredicted RBP15.45■□□□□ 0.06
TRIM28-203ENST00000593582 ZNF641Q96N77 438 aaPredicted RBP15.45■□□□□ 0.06
TRIM28-203ENST00000593582 LENG8Q96PV6 779 aaPredicted RBP15.45■□□□□ 0.06
TRIM28-203ENST00000593582 CSPG4P5Q96PW8 444 aa15.45■□□□□ 0.06
TRIM28-203ENST00000593582 CINPQ9BW66 212 aaPredicted RBP15.45■□□□□ 0.06
TRIM28-203ENST00000593582 C1QTNF2Q9BXJ5 285 aa15.45■□□□□ 0.06
TRIM28-203ENST00000593582 SUV39H2Q9H5I1 410 aa15.45■□□□□ 0.06
TRIM28-203ENST00000593582 KLHL11Q9NVR0 708 aa15.45■□□□□ 0.06
TRIM28-203ENST00000593582 TOR4AQ9NXH8 423 aa15.45■□□□□ 0.06
TRIM28-203ENST00000593582 CTTNBP2NLQ9P2B4 639 aa15.45■□□□□ 0.06
TRIM28-203ENST00000593582 IPO11Q9UI26 975 aaKnown RBP15.45■□□□□ 0.06
TRIM28-203ENST00000593582 GGT7Q9UJ14 662 aa15.45■□□□□ 0.06
TRIM28-203ENST00000593582 EPG5Q9HCE0 2579 aa15.45■□□□□ 0.06
TRIM28-203ENST00000593582 FAM221BA6H8Z2 402 aa15.44■□□□□ 0.06
TRIM28-203ENST00000593582 C1QTNF9BB2RNN3 333 aa15.44■□□□□ 0.06
TRIM28-203ENST00000593582 FPGTO14772 594 aa15.44■□□□□ 0.06
TRIM28-203ENST00000593582 PIGNO95427 931 aa15.44■□□□□ 0.06
TRIM28-203ENST00000593582 LDOC1O95751 146 aaPredicted RBP15.44■□□□□ 0.06
TRIM28-203ENST00000593582 PROS1P07225 676 aa15.44■□□□□ 0.06
TRIM28-203ENST00000593582 H2AFZP0C0S5 128 aa15.44■□□□□ 0.06
TRIM28-203ENST00000593582 C1QTNF9P0C862 333 aa15.44■□□□□ 0.06
TRIM28-203ENST00000593582 TIMP2P16035 220 aa15.44■□□□□ 0.06
TRIM28-203ENST00000593582 AMPD1P23109 780 aa15.44■□□□□ 0.06
TRIM28-203ENST00000593582 RABIFP47224 123 aa15.44■□□□□ 0.06
TRIM28-203ENST00000593582 SLC25A11Q02978 314 aaKnown RBP15.44■□□□□ 0.06
TRIM28-203ENST00000593582 KRT81Q14533 505 aa15.44■□□□□ 0.06
TRIM28-203ENST00000593582 HADHQ16836 314 aaKnown RBP15.44■□□□□ 0.06
TRIM28-203ENST00000593582 KYAT3Q6YP21 454 aaKnown RBP15.44■□□□□ 0.06
TRIM28-203ENST00000593582 ARHGAP36Q6ZRI8 547 aa15.44■□□□□ 0.06
TRIM28-203ENST00000593582 H2AFVQ71UI9 128 aa15.44■□□□□ 0.06
TRIM28-203ENST00000593582 TSEN2Q8NCE0 465 aaKnown RBP15.44■□□□□ 0.06
TRIM28-203ENST00000593582 CXorf40AQ8TE69 158 aa15.44■□□□□ 0.06
TRIM28-203ENST00000593582 ASB12Q8WXK4 309 aa15.44■□□□□ 0.06
TRIM28-203ENST00000593582 CNDP2Q96KP4 475 aaKnown RBP15.44■□□□□ 0.06
TRIM28-203ENST00000593582 TUBGCP5Q96RT8 1024 aa15.44■□□□□ 0.06
TRIM28-203ENST00000593582 C1QTNF7Q9BXJ2 289 aa15.44■□□□□ 0.06
TRIM28-203ENST00000593582 ATP13A3Q9H7F0 1226 aa15.44■□□□□ 0.06
TRIM28-203ENST00000593582 ABHD10Q9NUJ1 306 aa15.44■□□□□ 0.06
TRIM28-203ENST00000593582 UVRAGQ9P2Y5 699 aa15.44■□□□□ 0.06
TRIM28-203ENST00000593582 NENFQ9UMX5 172 aa15.44■□□□□ 0.06
TRIM28-203ENST00000593582 SSU72P8A0A1W2PR75 194 aa15.43■□□□□ 0.06
TRIM28-203ENST00000593582 POM121BA6NF01 834 aa15.43■□□□□ 0.06
TRIM28-203ENST00000593582 ENC1O14682 589 aa15.43■□□□□ 0.06
TRIM28-203ENST00000593582 RAD51BO15315 384 aa15.43■□□□□ 0.06
TRIM28-203ENST00000593582 SPINT1O43278 529 aa15.43■□□□□ 0.06
TRIM28-203ENST00000593582 AKR1B10O60218 316 aa15.43■□□□□ 0.06
TRIM28-203ENST00000593582 SDC3O75056 442 aa15.43■□□□□ 0.06
TRIM28-203ENST00000593582 TM7SF2O76062 418 aa15.43■□□□□ 0.06
TRIM28-203ENST00000593582 DKK1O94907 266 aa15.43■□□□□ 0.06
TRIM28-203ENST00000593582 SERPINA4P29622 427 aa15.43■□□□□ 0.06
TRIM28-203ENST00000593582 SERPINB6P35237 376 aa15.43■□□□□ 0.06
TRIM28-203ENST00000593582 CSNK1DP48730 415 aa15.43■□□□□ 0.06
TRIM28-203ENST00000593582 RENBPP51606 427 aa15.43■□□□□ 0.06
TRIM28-203ENST00000593582 NSUN2Q08J23 767 aaKnown RBP eCLIP15.43■□□□□ 0.06
TRIM28-203ENST00000593582 ELP6Q0PNE2 266 aa15.43■□□□□ 0.06
TRIM28-203ENST00000593582 UGP2Q16851 508 aa15.43■□□□□ 0.06
TRIM28-203ENST00000593582 CCDC157Q569K6 752 aa15.43■□□□□ 0.06
TRIM28-203ENST00000593582 TXNRD3NBQ6F5E7 133 aa15.43■□□□□ 0.06
TRIM28-203ENST00000593582 BRAT1Q6PJG6 821 aa15.43■□□□□ 0.06
TRIM28-203ENST00000593582 SRLQ86TD4 932 aa15.43■□□□□ 0.06
TRIM28-203ENST00000593582 CAMK1DQ8IU85 385 aa15.43■□□□□ 0.06
TRIM28-203ENST00000593582 SLC22A18ASQ8N1D0 253 aa15.43■□□□□ 0.06
TRIM28-203ENST00000593582 DENND6BQ8NEG7 585 aa15.43■□□□□ 0.06
TRIM28-203ENST00000593582 GATA6Q92908 595 aa15.43■□□□□ 0.06
TRIM28-203ENST00000593582 IFT43Q96FT9 208 aa15.43■□□□□ 0.06
TRIM28-203ENST00000593582 BMFQ96LC9 184 aa15.43■□□□□ 0.06
TRIM28-203ENST00000593582 ZNF599Q96NL3 588 aa15.43■□□□□ 0.06
TRIM28-203ENST00000593582 KLF6Q99612 283 aaPredicted RBP15.43■□□□□ 0.06
TRIM28-203ENST00000593582 PCDH18Q9HCL0 1135 aa15.43■□□□□ 0.06
TRIM28-203ENST00000593582 RCOR3Q9P2K3 495 aaPredicted RBP15.43■□□□□ 0.06
TRIM28-203ENST00000593582 SEPT3Q9UH03 358 aa15.43■□□□□ 0.06
TRIM28-203ENST00000593582 LCMT1Q9UIC8 334 aa15.43■□□□□ 0.06
TRIM28-203ENST00000593582 FREM2Q5SZK8 3169 aa15.43■□□□□ 0.06
TRIM28-203ENST00000593582 TSPAN11A1L157 253 aa15.42■□□□□ 0.06
TRIM28-203ENST00000593582 TMEM8BA6NDV4 472 aa15.42■□□□□ 0.06
TRIM28-203ENST00000593582 MMP20O60882 483 aa15.42■□□□□ 0.06
TRIM28-203ENST00000593582 MFAP3LO75121 409 aa15.42■□□□□ 0.06
TRIM28-203ENST00000593582 RGRP47804 291 aa15.42■□□□□ 0.06
TRIM28-203ENST00000593582 CDH6P55285 790 aa15.42■□□□□ 0.06
TRIM28-203ENST00000593582 LBRQ14739 615 aaKnown RBP15.42■□□□□ 0.06
TRIM28-203ENST00000593582 ASTE1Q2TB18 679 aaPredicted RBP15.42■□□□□ 0.06
TRIM28-203ENST00000593582 HS1BP3Q53T59 392 aa15.42■□□□□ 0.06
TRIM28-203ENST00000593582 TMCO4Q5TGY1 634 aa15.42■□□□□ 0.06
TRIM28-203ENST00000593582 ERAP2Q6P179 960 aa15.42■□□□□ 0.06
TRIM28-203ENST00000593582 KANSL1Q7Z3B3 1105 aa15.42■□□□□ 0.06
TRIM28-203ENST00000593582 TP53INP2Q8IXH6 220 aa15.42■□□□□ 0.06
TRIM28-203ENST00000593582 PAF1Q8N7H5 531 aa15.42■□□□□ 0.06
TRIM28-203ENST00000593582 TSC1Q92574 1164 aa15.42■□□□□ 0.06
TRIM28-203ENST00000593582 PSKH2Q96QS6 385 aa15.42■□□□□ 0.06
TRIM28-203ENST00000593582 WRAP53Q9BUR4 548 aaKnown RBP15.42■□□□□ 0.06
TRIM28-203ENST00000593582 PACSIN1Q9BY11 444 aa15.42■□□□□ 0.06
TRIM28-203ENST00000593582 GPR27Q9NS67 375 aa15.42■□□□□ 0.06
TRIM28-203ENST00000593582 ETNK2Q9NVF9 386 aa15.42■□□□□ 0.06
TRIM28-203ENST00000593582 DNAJC28Q9NX36 388 aa15.42■□□□□ 0.06
TRIM28-203ENST00000593582 AKAP13Q12802 2813 aa15.42■□□□□ 0.06
TRIM28-203ENST00000593582 TRPM6Q9BX84 2022 aa15.41■□□□□ 0.06
TRIM28-203ENST00000593582 BUB1BO60566 1050 aaPredicted RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms