RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 PCDH15Q96QU1 1955 aa15.48■□□□□ 0.07
TRIM47-206ENST00000592942 FOXD2O60548 495 aaPredicted RBP15.48■□□□□ 0.07
TRIM47-206ENST00000592942 CST8O60676 142 aa15.48■□□□□ 0.07
TRIM47-206ENST00000592942 RNGTTO60942 597 aaKnown RBP15.48■□□□□ 0.07
TRIM47-206ENST00000592942 ZFXP17010 805 aaPredicted RBP15.48■□□□□ 0.07
TRIM47-206ENST00000592942 SCNN1BP51168 640 aa15.48■□□□□ 0.07
TRIM47-206ENST00000592942 RENBPP51606 427 aa15.48■□□□□ 0.07
TRIM47-206ENST00000592942 MAXP61244 160 aa15.48■□□□□ 0.07
TRIM47-206ENST00000592942 LMNB2Q03252 620 aa15.48■□□□□ 0.07
TRIM47-206ENST00000592942 PPIDQ08752 370 aaKnown RBP15.48■□□□□ 0.07
TRIM47-206ENST00000592942 CCDC15Q0P6D6 951 aa15.48■□□□□ 0.07
TRIM47-206ENST00000592942 FGL2Q14314 439 aa15.48■□□□□ 0.07
TRIM47-206ENST00000592942 ZNF284Q2VY69 593 aa15.48■□□□□ 0.07
TRIM47-206ENST00000592942 TFDP3Q5H9I0 405 aa15.48■□□□□ 0.07
TRIM47-206ENST00000592942 FBXL19Q6PCT2 694 aa15.48■□□□□ 0.07
TRIM47-206ENST00000592942 TTC7BQ86TV6 843 aa15.48■□□□□ 0.07
TRIM47-206ENST00000592942 C12orf50Q8NA57 414 aaPredicted RBP15.48■□□□□ 0.07
TRIM47-206ENST00000592942 SNX19Q92543 992 aa15.48■□□□□ 0.07
TRIM47-206ENST00000592942 ECHDC3Q96DC8 303 aa15.48■□□□□ 0.07
TRIM47-206ENST00000592942 NUDCD1Q96RS6 583 aa15.48■□□□□ 0.07
TRIM47-206ENST00000592942 TUBGCP5Q96RT8 1024 aa15.48■□□□□ 0.07
TRIM47-206ENST00000592942 NOD2Q9HC29 1040 aa15.48■□□□□ 0.07
TRIM47-206ENST00000592942 GGT7Q9UJ14 662 aa15.48■□□□□ 0.07
TRIM47-206ENST00000592942 HEY1Q9Y5J3 304 aa15.48■□□□□ 0.07
TRIM47-206ENST00000592942 ADAMTS9Q9P2N4 1935 aa15.47■□□□□ 0.07
TRIM47-206ENST00000592942 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.47■□□□□ 0.07
TRIM47-206ENST00000592942 A0A1W2PQU0 124 aa15.47■□□□□ 0.07
TRIM47-206ENST00000592942 A0A1W2PR77 199 aa15.47■□□□□ 0.07
TRIM47-206ENST00000592942 CCDC66A2RUB6 948 aa15.47■□□□□ 0.07
TRIM47-206ENST00000592942 PRR5-ARHGAP8B1AHC4 643 aa15.47■□□□□ 0.07
TRIM47-206ENST00000592942 TM4SF5O14894 197 aa15.47■□□□□ 0.07
TRIM47-206ENST00000592942 DDX3YO15523 660 aaKnown RBP15.47■□□□□ 0.07
TRIM47-206ENST00000592942 WNT1P04628 370 aa15.47■□□□□ 0.07
TRIM47-206ENST00000592942 CFIP05156 583 aa15.47■□□□□ 0.07
TRIM47-206ENST00000592942 PYGMP11217 842 aa15.47■□□□□ 0.07
TRIM47-206ENST00000592942 CCNB1P14635 433 aa15.47■□□□□ 0.07
TRIM47-206ENST00000592942 GNSP15586 552 aa15.47■□□□□ 0.07
TRIM47-206ENST00000592942 PECAM1P16284 738 aaPredicted RBP15.47■□□□□ 0.07
TRIM47-206ENST00000592942 ENGP17813 658 aa15.47■□□□□ 0.07
TRIM47-206ENST00000592942 MX2P20592 715 aa15.47■□□□□ 0.07
TRIM47-206ENST00000592942 MAT2AP31153 395 aaKnown RBP15.47■□□□□ 0.07
TRIM47-206ENST00000592942 MMP13P45452 471 aa15.47■□□□□ 0.07
TRIM47-206ENST00000592942 CSNK1EP49674 416 aaKnown RBP15.47■□□□□ 0.07
TRIM47-206ENST00000592942 LIMK1P53667 647 aa15.47■□□□□ 0.07
TRIM47-206ENST00000592942 DYNLT1P63172 113 aa15.47■□□□□ 0.07
TRIM47-206ENST00000592942 ARHGAP8P85298 464 aa15.47■□□□□ 0.07
TRIM47-206ENST00000592942 GRM3Q14832 879 aa15.47■□□□□ 0.07
TRIM47-206ENST00000592942 CACNA1EQ15878 2313 aa15.47■□□□□ 0.07
TRIM47-206ENST00000592942 PPP2R5EQ16537 467 aa15.47■□□□□ 0.07
TRIM47-206ENST00000592942 TMEM259Q4ZIN3 620 aa15.47■□□□□ 0.07
TRIM47-206ENST00000592942 KAZNQ674X7 775 aa15.47■□□□□ 0.07
TRIM47-206ENST00000592942 SEL1L3Q68CR1 1132 aa15.47■□□□□ 0.07
TRIM47-206ENST00000592942 ALG1LQ6GMV1 187 aa15.47■□□□□ 0.07
TRIM47-206ENST00000592942 AADACL2Q6P093 401 aa15.47■□□□□ 0.07
TRIM47-206ENST00000592942 B4GALNT4Q76KP1 1039 aa15.47■□□□□ 0.07
TRIM47-206ENST00000592942 HORMAD1Q86X24 394 aa15.47■□□□□ 0.07
TRIM47-206ENST00000592942 CCDC13Q8IYE1 715 aa15.47■□□□□ 0.07
TRIM47-206ENST00000592942 TXLNBQ8N3L3 684 aa15.47■□□□□ 0.07
TRIM47-206ENST00000592942 CNTD1Q8N815 330 aa15.47■□□□□ 0.07
TRIM47-206ENST00000592942 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.47■□□□□ 0.07
TRIM47-206ENST00000592942 KLK6Q92876 244 aa15.47■□□□□ 0.07
TRIM47-206ENST00000592942 RAB7BQ96AH8 199 aa15.47■□□□□ 0.07
TRIM47-206ENST00000592942 RMDN1Q96DB5 314 aa15.47■□□□□ 0.07
TRIM47-206ENST00000592942 SLC6A18Q96N87 628 aa15.47■□□□□ 0.07
TRIM47-206ENST00000592942 IL12RB2Q99665 862 aa15.47■□□□□ 0.07
TRIM47-206ENST00000592942 NUSAP1Q9BXS6 441 aaKnown RBP15.47■□□□□ 0.07
TRIM47-206ENST00000592942 RBM22Q9NW64 420 aaKnown RBP eCLIP15.47■□□□□ 0.07
TRIM47-206ENST00000592942 SUSD2Q9UGT4 822 aa15.47■□□□□ 0.07
TRIM47-206ENST00000592942 AMFRQ9UKV5 643 aa15.47■□□□□ 0.07
TRIM47-206ENST00000592942 PACSIN2Q9UNF0 486 aaPredicted RBP15.47■□□□□ 0.07
TRIM47-206ENST00000592942 ITM2BQ9Y287 266 aa15.47■□□□□ 0.07
TRIM47-206ENST00000592942 ATP8A1Q9Y2Q0 1164 aa15.47■□□□□ 0.07
TRIM47-206ENST00000592942 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.47■□□□□ 0.07
TRIM47-206ENST00000592942 KNL1Q8NG31 2342 aa15.46■□□□□ 0.07
TRIM47-206ENST00000592942 PLXNA2O75051 1894 aa15.46■□□□□ 0.07
TRIM47-206ENST00000592942 ARHGAP33O14559 1287 aa15.46■□□□□ 0.07
TRIM47-206ENST00000592942 HTRA2O43464 458 aaPredicted RBP15.46■□□□□ 0.07
TRIM47-206ENST00000592942 PCDH8O95206 1070 aa15.46■□□□□ 0.07
TRIM47-206ENST00000592942 FTCDO95954 541 aa15.46■□□□□ 0.07
TRIM47-206ENST00000592942 HSPA9P38646 679 aaKnown RBP15.46■□□□□ 0.07
TRIM47-206ENST00000592942 NR2C2P49116 596 aa15.46■□□□□ 0.07
TRIM47-206ENST00000592942 COPS2P61201 443 aa15.46■□□□□ 0.07
TRIM47-206ENST00000592942 AP1S1P61966 158 aa15.46■□□□□ 0.07
TRIM47-206ENST00000592942 RACK1P63244 317 aaKnown RBP15.46■□□□□ 0.07
TRIM47-206ENST00000592942 TFDP2Q14188 446 aa15.46■□□□□ 0.07
TRIM47-206ENST00000592942 ZNF235Q14590 738 aa15.46■□□□□ 0.07
TRIM47-206ENST00000592942 UGP2Q16851 508 aa15.46■□□□□ 0.07
TRIM47-206ENST00000592942 RSPO4Q2I0M5 234 aaPredicted RBP15.46■□□□□ 0.07
TRIM47-206ENST00000592942 AASDHQ4L235 1098 aaPredicted RBP15.46■□□□□ 0.07
TRIM47-206ENST00000592942 LRRC73Q5JTD7 316 aa15.46■□□□□ 0.07
TRIM47-206ENST00000592942 TIGD7Q6NT04 549 aaPredicted RBP15.46■□□□□ 0.07
TRIM47-206ENST00000592942 LAYNQ6UX15 382 aa15.46■□□□□ 0.07
TRIM47-206ENST00000592942 RABEPKQ7Z6M1 372 aa15.46■□□□□ 0.07
TRIM47-206ENST00000592942 PRPF39Q86UA1 669 aaKnown RBP15.46■□□□□ 0.07
TRIM47-206ENST00000592942 CCNYQ8ND76 341 aa15.46■□□□□ 0.07
TRIM47-206ENST00000592942 ARRDC2Q8TBH0 407 aa15.46■□□□□ 0.07
TRIM47-206ENST00000592942 SPOCK2Q92563 424 aa15.46■□□□□ 0.07
TRIM47-206ENST00000592942 HES6Q96HZ4 224 aa15.46■□□□□ 0.07
TRIM47-206ENST00000592942 RBM41Q96IZ5 413 aaKnown RBP15.46■□□□□ 0.07
TRIM47-206ENST00000592942 FEM1CQ96JP0 617 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms