RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 PSMD5Q16401 504 aa15□□□□□ -0.01
SMARCA4-219ENST00000592604 REP15Q6BDI9 236 aa15□□□□□ -0.01
SMARCA4-219ENST00000592604 C8orf82Q6P1X6 216 aaPredicted RBP15□□□□□ -0.01
SMARCA4-219ENST00000592604 DENND6AQ8IWF6 608 aa15□□□□□ -0.01
SMARCA4-219ENST00000592604 HM13Q8TCT9 377 aa15□□□□□ -0.01
SMARCA4-219ENST00000592604 TSGA13Q96PP4 275 aa15□□□□□ -0.01
SMARCA4-219ENST00000592604 ANKRD60Q9BZ19 345 aa15□□□□□ -0.01
SMARCA4-219ENST00000592604 TRPV6Q9H1D0 765 aa15□□□□□ -0.01
SMARCA4-219ENST00000592604 MROH8Q9H579 483 aa15□□□□□ -0.01
SMARCA4-219ENST00000592604 SPAG4Q9NPE6 437 aa15□□□□□ -0.01
SMARCA4-219ENST00000592604 DNAAF2Q9NVR5 837 aaKnown RBP15□□□□□ -0.01
SMARCA4-219ENST00000592604 CSADQ9Y600 493 aa15□□□□□ -0.01
SMARCA4-219ENST00000592604 BRCA1P38398 1863 aaKnown RBP15□□□□□ -0.01
SMARCA4-219ENST00000592604 NRCAMQ92823 1304 aa15□□□□□ -0.01
SMARCA4-219ENST00000592604 CCDC78A2IDD5 438 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 ATP6V1G1O75348 118 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 CSPG5O95196 566 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 ZNF24P17028 368 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 KPNA2P52292 529 aaKnown RBP14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 ADARP55265 1226 aaKnown RBP14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 ZNF33AQ06730 810 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 TMEM62Q0P6H9 643 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 CTBP1Q13363 440 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 SV2CQ496J9 727 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 C16orf87Q6PH81 154 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 HACD2Q6Y1H2 254 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 TOP6BLQ8N6T0 577 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 TMIGD2Q96BF3 282 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 ZNF512Q96ME7 567 aaPredicted RBP14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 BIRC8Q96P09 236 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 TMEM79Q9BSE2 394 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 POMKQ9H5K3 350 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 TRPC7Q9HCX4 862 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 LTBP3Q9NS15 1303 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 PSMD12O00232 456 aaPredicted RBP14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 UBDO15205 165 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 PFDN1O60925 122 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 ARNTP27540 789 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 TAS2R39P59534 338 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 FASTKQ14296 549 aaKnown RBP14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 ARL13BQ3SXY8 428 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 XKR4Q5GH76 650 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 FAM45BPQ6NSW5 357 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 HMBOX1Q6NT76 420 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 CCDC117Q8IWD4 279 aaPredicted RBP14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 FAM45AQ8TCE6 357 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 HEXDCQ8WVB3 486 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 EFHD1Q9BUP0 239 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 GTSE1Q9NYZ3 720 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 TMEM181Q9P2C4 612 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 AAR2Q9Y312 384 aaKnown RBP14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 HTRA2O43464 458 aaPredicted RBP14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 XPOTO43592 962 aaKnown RBP14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 BMP10O95393 424 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 SNRPB2P08579 225 aaKnown RBP14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 HNRNPLP14866 589 aaKnown RBP eCLIP14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 KCNE1P15382 129 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 AKAP5P24588 427 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 DAOAP59103 153 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 MTX3Q5HYI7 312 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 C6orf10Q5SRN2 563 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 PPP4R4Q6NUP7 873 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 DHRS4L2Q6PKH6 230 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 OTOP3Q7RTS5 596 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 SPATA6LQ8N4H0 392 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 ANKFN1Q8N957 763 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 RMND5BQ96G75 393 aaPredicted RBP14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 CAAP1Q9H8G2 361 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 SNX13Q9Y5W8 968 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 ZNF236Q9UL36 1845 aa14.99□□□□□ -0.01
SMARCA4-219ENST00000592604 OTOFQ9HC10 1997 aa14.98□□□□□ -0.01
SMARCA4-219ENST00000592604 YJEFN3A6XGL0 299 aa14.98□□□□□ -0.01
SMARCA4-219ENST00000592604 CCNA1P78396 465 aa14.98□□□□□ -0.01
SMARCA4-219ENST00000592604 AGKQ53H12 422 aa14.98□□□□□ -0.01
SMARCA4-219ENST00000592604 NHSL2Q5HYW2 709 aa14.98□□□□□ -0.01
SMARCA4-219ENST00000592604 SAMD4BQ5PRF9 694 aaKnown RBP14.98□□□□□ -0.01
SMARCA4-219ENST00000592604 ACBD5Q5T8D3 534 aaPredicted RBP14.98□□□□□ -0.01
SMARCA4-219ENST00000592604 KRT80Q6KB66 452 aa14.98□□□□□ -0.01
SMARCA4-219ENST00000592604 POTEHQ6S545 545 aa14.98□□□□□ -0.01
SMARCA4-219ENST00000592604 PTAR1Q7Z6K3 402 aaPredicted RBP14.98□□□□□ -0.01
SMARCA4-219ENST00000592604 MYO1HQ8N1T3 1032 aa14.98□□□□□ -0.01
SMARCA4-219ENST00000592604 AFAP1L2Q8N4X5 818 aa14.98□□□□□ -0.01
SMARCA4-219ENST00000592604 PBXIP1Q96AQ6 731 aa14.98□□□□□ -0.01
SMARCA4-219ENST00000592604 PPP1R14BQ96C90 147 aa14.98□□□□□ -0.01
SMARCA4-219ENST00000592604 CCDC126Q96EE4 140 aa14.98□□□□□ -0.01
SMARCA4-219ENST00000592604 TBL1YQ9BQ87 522 aa14.98□□□□□ -0.01
SMARCA4-219ENST00000592604 SLC25A23Q9BV35 468 aa14.98□□□□□ -0.01
SMARCA4-219ENST00000592604 ULBP1Q9BZM6 244 aa14.98□□□□□ -0.01
SMARCA4-219ENST00000592604 DUS2Q9NX74 493 aaKnown RBP14.98□□□□□ -0.01
SMARCA4-219ENST00000592604 GPRC5DQ9NZD1 345 aa14.98□□□□□ -0.01
SMARCA4-219ENST00000592604 SLC8A2Q9UPR5 921 aa14.98□□□□□ -0.01
SMARCA4-219ENST00000592604 TRIM64CA6NLI5 447 aa14.98□□□□□ -0.01
SMARCA4-219ENST00000592604 GPR32O75388 356 aa14.98□□□□□ -0.01
SMARCA4-219ENST00000592604 BMP2P12643 396 aa14.98□□□□□ -0.01
SMARCA4-219ENST00000592604 LILRA4P59901 499 aa14.98□□□□□ -0.01
SMARCA4-219ENST00000592604 C1QTNF8P60827 252 aa14.98□□□□□ -0.01
SMARCA4-219ENST00000592604 POU4F1Q01851 419 aa14.98□□□□□ -0.01
SMARCA4-219ENST00000592604 SOX4Q06945 474 aaPredicted RBP14.98□□□□□ -0.01
SMARCA4-219ENST00000592604 GALNT1Q10472 559 aaPredicted RBP14.98□□□□□ -0.01
SMARCA4-219ENST00000592604 PCBP1Q15365 356 aaKnown RBP eCLIP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms