RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 TSPAN11A1L157 253 aa27.54■■■□□ 2
SMAD4-213ENST00000591914 NEMP1O14524 444 aa27.54■■■□□ 2
SMAD4-213ENST00000591914 YKT6O15498 198 aa27.54■■■□□ 2
SMAD4-213ENST00000591914 MTA2O94776 668 aa27.54■■■□□ 2
SMAD4-213ENST00000591914 PEX11BO96011 259 aa27.54■■■□□ 2
SMAD4-213ENST00000591914 TIMP2P16035 220 aa27.54■■■□□ 2
SMAD4-213ENST00000591914 GRK6P43250 576 aa27.54■■■□□ 2
SMAD4-213ENST00000591914 NSUN2Q08J23 767 aaKnown RBP eCLIP27.54■■■□□ 2
SMAD4-213ENST00000591914 MMRN1Q13201 1228 aa27.54■■■□□ 2
SMAD4-213ENST00000591914 DPYSL3Q14195 570 aa27.54■■■□□ 2
SMAD4-213ENST00000591914 TMCO4Q5TGY1 634 aa27.54■■■□□ 2
SMAD4-213ENST00000591914 GCNT7Q6ZNI0 430 aa27.54■■■□□ 2
SMAD4-213ENST00000591914 RHOT2Q8IXI1 618 aa27.54■■■□□ 2
SMAD4-213ENST00000591914 OXR1Q8N573 874 aa27.54■■■□□ 2
SMAD4-213ENST00000591914 KLHDC7BQ96G42 594 aa27.54■■■□□ 2
SMAD4-213ENST00000591914 ZNF641Q96N77 438 aaPredicted RBP27.54■■■□□ 2
SMAD4-213ENST00000591914 PSKH2Q96QS6 385 aa27.54■■■□□ 2
SMAD4-213ENST00000591914 SUV39H2Q9H5I1 410 aa27.54■■■□□ 2
SMAD4-213ENST00000591914 IGLON5A6NGN9 336 aa27.53■■■□□ 2
SMAD4-213ENST00000591914 BUB1BO60566 1050 aaPredicted RBP27.53■■■□□ 2
SMAD4-213ENST00000591914 MAFKO60675 156 aa27.53■■■□□ 2
SMAD4-213ENST00000591914 PAK4O96013 591 aaPredicted RBP27.53■■■□□ 2
SMAD4-213ENST00000591914 KRT7P08729 469 aa27.53■■■□□ 2
SMAD4-213ENST00000591914 GJC1P36383 396 aa27.53■■■□□ 2
SMAD4-213ENST00000591914 RXRGP48443 463 aa27.53■■■□□ 2
SMAD4-213ENST00000591914 ARRB1P49407 418 aaPredicted RBP27.53■■■□□ 2
SMAD4-213ENST00000591914 SUOXP51687 545 aa27.53■■■□□ 2
SMAD4-213ENST00000591914 LBRQ14739 615 aaKnown RBP27.53■■■□□ 2
SMAD4-213ENST00000591914 PDK2Q15119 407 aa27.53■■■□□ 2
SMAD4-213ENST00000591914 LRRC73Q5JTD7 316 aa27.53■■■□□ 2
SMAD4-213ENST00000591914 ABI3BPQ7Z7G0 1075 aa27.53■■■□□ 2
SMAD4-213ENST00000591914 SRLQ86TD4 932 aa27.53■■■□□ 2
SMAD4-213ENST00000591914 RHBDD1Q8TEB9 315 aa27.53■■■□□ 2
SMAD4-213ENST00000591914 ASB12Q8WXK4 309 aa27.53■■■□□ 2
SMAD4-213ENST00000591914 RFFLQ8WZ73 363 aa27.53■■■□□ 2
SMAD4-213ENST00000591914 ZNF670Q9BS34 389 aa27.53■■■□□ 2
SMAD4-213ENST00000591914 SEPT3Q9UH03 358 aa27.53■■■□□ 2
SMAD4-213ENST00000591914 INTUQ9ULD6 942 aa27.53■■■□□ 2
SMAD4-213ENST00000591914 SPEGQ15772 3267 aa27.52■■■□□ 2
SMAD4-213ENST00000591914 MUSKO15146 869 aa27.52■■■□□ 2
SMAD4-213ENST00000591914 THEGLP0DJG4 465 aa27.52■■■□□ 2
SMAD4-213ENST00000591914 ARHGAP25P42331 645 aa27.52■■■□□ 2
SMAD4-213ENST00000591914 ZNF75DP51815 510 aa27.52■■■□□ 2
SMAD4-213ENST00000591914 CLDN2P57739 230 aa27.52■■■□□ 2
SMAD4-213ENST00000591914 SLC10A7Q0GE19 358 aa27.52■■■□□ 2
SMAD4-213ENST00000591914 FOXC1Q12948 553 aa27.52■■■□□ 2
SMAD4-213ENST00000591914 MESDQ14696 234 aa27.52■■■□□ 2
SMAD4-213ENST00000591914 KCTD6Q8NC69 237 aa27.52■■■□□ 2
SMAD4-213ENST00000591914 OR13H1Q8NG92 308 aa27.52■■■□□ 2
SMAD4-213ENST00000591914 FAM174AQ8TBP5 190 aa27.52■■■□□ 2
SMAD4-213ENST00000591914 SAP25Q8TEE9 199 aa27.52■■■□□ 2
SMAD4-213ENST00000591914 MRFAP1L1Q96HT8 127 aa27.52■■■□□ 2
SMAD4-213ENST00000591914 LENG8Q96PV6 779 aaPredicted RBP27.52■■■□□ 2
SMAD4-213ENST00000591914 KLF6Q99612 283 aaPredicted RBP27.52■■■□□ 2
SMAD4-213ENST00000591914 CDC6Q99741 560 aa27.52■■■□□ 2
SMAD4-213ENST00000591914 CALN1Q9BXU9 219 aa27.52■■■□□ 2
SMAD4-213ENST00000591914 HS3ST3A1Q9Y663 406 aa27.52■■■□□ 2
SMAD4-213ENST00000591914 TMEM110-MUSTN1A8MSY1 372 aa27.51■■□□□ 1.99
SMAD4-213ENST00000591914 RAD51BO15315 384 aa27.51■■□□□ 1.99
SMAD4-213ENST00000591914 EPHA8P29322 1005 aaPredicted RBP27.51■■□□□ 1.99
SMAD4-213ENST00000591914 RENBPP51606 427 aa27.51■■□□□ 1.99
SMAD4-213ENST00000591914 SGCGQ13326 291 aa27.51■■□□□ 1.99
SMAD4-213ENST00000591914 TCEAL1Q15170 157 aa27.51■■□□□ 1.99
SMAD4-213ENST00000591914 BRAT1Q6PJG6 821 aa27.51■■□□□ 1.99
SMAD4-213ENST00000591914 CAMK1DQ8IU85 385 aa27.51■■□□□ 1.99
SMAD4-213ENST00000591914 ATPAF2Q8N5M1 289 aa27.51■■□□□ 1.99
SMAD4-213ENST00000591914 PCDH19Q8TAB3 1148 aa27.51■■□□□ 1.99
SMAD4-213ENST00000591914 ATP13A3Q9H7F0 1226 aa27.51■■□□□ 1.99
SMAD4-213ENST00000591914 KLHL11Q9NVR0 708 aa27.51■■□□□ 1.99
SMAD4-213ENST00000591914 A6NNZ2 444 aa27.5■■□□□ 1.99
SMAD4-213ENST00000591914 ITIH2P19823 946 aa27.5■■□□□ 1.99
SMAD4-213ENST00000591914 SERPINA4P29622 427 aa27.5■■□□□ 1.99
SMAD4-213ENST00000591914 UGP2Q16851 508 aa27.5■■□□□ 1.99
SMAD4-213ENST00000591914 INAVAQ3KP66 663 aa27.5■■□□□ 1.99
SMAD4-213ENST00000591914 ANKRD20A8PQ5CZ79 823 aa27.5■■□□□ 1.99
SMAD4-213ENST00000591914 GAS2L3Q86XJ1 694 aa27.5■■□□□ 1.99
SMAD4-213ENST00000591914 GATAD2AQ86YP4 633 aa27.5■■□□□ 1.99
SMAD4-213ENST00000591914 LRRC49Q8IUZ0 686 aa27.5■■□□□ 1.99
SMAD4-213ENST00000591914 MAP7D3Q8IWC1 876 aa27.5■■□□□ 1.99
SMAD4-213ENST00000591914 FAF2Q96CS3 445 aa27.5■■□□□ 1.99
SMAD4-213ENST00000591914 BMFQ96LC9 184 aa27.5■■□□□ 1.99
SMAD4-213ENST00000591914 GPR27Q9NS67 375 aa27.5■■□□□ 1.99
SMAD4-213ENST00000591914 TRIM16O95361 564 aa27.49■■□□□ 1.99
SMAD4-213ENST00000591914 HSPA9P38646 679 aaKnown RBP27.49■■□□□ 1.99
SMAD4-213ENST00000591914 AP1S1P61966 158 aa27.49■■□□□ 1.99
SMAD4-213ENST00000591914 ELP6Q0PNE2 266 aa27.49■■□□□ 1.99
SMAD4-213ENST00000591914 PAFAH1B3Q15102 231 aaKnown RBP27.49■■□□□ 1.99
SMAD4-213ENST00000591914 NCBP2-AS2Q69YL0 99 aa27.49■■□□□ 1.99
SMAD4-213ENST00000591914 KYAT3Q6YP21 454 aaKnown RBP27.49■■□□□ 1.99
SMAD4-213ENST00000591914 ZSWIM9Q86XI8 627 aa27.49■■□□□ 1.99
SMAD4-213ENST00000591914 SLC22A18ASQ8N1D0 253 aa27.49■■□□□ 1.99
SMAD4-213ENST00000591914 DENND6BQ8NEG7 585 aa27.49■■□□□ 1.99
SMAD4-213ENST00000591914 ECHDC3Q96DC8 303 aa27.49■■□□□ 1.99
SMAD4-213ENST00000591914 ANKRD36A6QL64 1941 aa27.49■■□□□ 1.99
SMAD4-213ENST00000591914 CEP295Q9C0D2 2601 aa27.48■■□□□ 1.99
SMAD4-213ENST00000591914 POM121BA6NF01 834 aa27.48■■□□□ 1.99
SMAD4-213ENST00000591914 MFSD11O43934 449 aa27.48■■□□□ 1.99
SMAD4-213ENST00000591914 LCA5LO95447 670 aa27.48■■□□□ 1.99
SMAD4-213ENST00000591914 TOP3BO95985 862 aaKnown RBP27.48■■□□□ 1.99
SMAD4-213ENST00000591914 ITGAVP06756 1048 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms