RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 LRRC8DQ7L1W4 858 aa17.26■□□□□ 0.35
SMARCA4-215ENST00000590574 FAM126BQ8IXS8 530 aa17.26■□□□□ 0.35
SMARCA4-215ENST00000590574 OSBPL11Q9BXB4 747 aa17.26■□□□□ 0.35
SMARCA4-215ENST00000590574 TRAF6Q9Y4K3 522 aa17.26■□□□□ 0.35
SMARCA4-215ENST00000590574 MYH14Q7Z406 1995 aaKnown RBP17.26■□□□□ 0.35
SMARCA4-215ENST00000590574 E7ESA3 106 aa17.26■□□□□ 0.35
SMARCA4-215ENST00000590574 ADARP55265 1226 aaKnown RBP17.26■□□□□ 0.35
SMARCA4-215ENST00000590574 MRPS6P82932 125 aaKnown RBP17.26■□□□□ 0.35
SMARCA4-215ENST00000590574 DMC1Q14565 340 aa17.26■□□□□ 0.35
SMARCA4-215ENST00000590574 MTX3Q5HYI7 312 aa17.26■□□□□ 0.35
SMARCA4-215ENST00000590574 STAG3L4Q8TBR4 150 aa17.26■□□□□ 0.35
SMARCA4-215ENST00000590574 MAGEE2Q8TD90 523 aaPredicted RBP17.26■□□□□ 0.35
SMARCA4-215ENST00000590574 PIWIL1Q96J94 861 aaKnown RBP17.26■□□□□ 0.35
SMARCA4-215ENST00000590574 ANAPC2Q9UJX6 822 aa17.26■□□□□ 0.35
SMARCA4-215ENST00000590574 VWA7Q9Y334 891 aa17.26■□□□□ 0.35
SMARCA4-215ENST00000590574 TMEM247A6NEH6 219 aa17.26■□□□□ 0.35
SMARCA4-215ENST00000590574 ZNF197O14709 1029 aa17.26■□□□□ 0.35
SMARCA4-215ENST00000590574 SLC44A4Q53GD3 710 aa17.26■□□□□ 0.35
SMARCA4-215ENST00000590574 STK32CQ86UX6 486 aa17.26■□□□□ 0.35
SMARCA4-215ENST00000590574 CAND1Q86VP6 1230 aaKnown RBP17.26■□□□□ 0.35
SMARCA4-215ENST00000590574 SLC7A6OSQ96CW6 309 aaPredicted RBP17.26■□□□□ 0.35
SMARCA4-215ENST00000590574 DACH2Q96NX9 599 aa17.26■□□□□ 0.35
SMARCA4-215ENST00000590574 KLHL5Q96PQ7 755 aa17.26■□□□□ 0.35
SMARCA4-215ENST00000590574 TMPRSS4Q9NRS4 437 aa17.26■□□□□ 0.35
SMARCA4-215ENST00000590574 ZMYM5Q9UJ78 669 aa17.26■□□□□ 0.35
SMARCA4-215ENST00000590574 PIRTP0C851 137 aa17.25■□□□□ 0.35
SMARCA4-215ENST00000590574 HGFP14210 728 aa17.25■□□□□ 0.35
SMARCA4-215ENST00000590574 RAP1GDS1P52306 607 aa17.25■□□□□ 0.35
SMARCA4-215ENST00000590574 RHOAP61586 193 aa17.25■□□□□ 0.35
SMARCA4-215ENST00000590574 CLDN10P78369 228 aa17.25■□□□□ 0.35
SMARCA4-215ENST00000590574 TTLL9Q3SXZ7 439 aa17.25■□□□□ 0.35
SMARCA4-215ENST00000590574 CHADLQ6NUI6 762 aa17.25■□□□□ 0.35
SMARCA4-215ENST00000590574 PAIP1Q9H074 479 aaKnown RBP17.25■□□□□ 0.35
SMARCA4-215ENST00000590574 ST3GAL5Q9UNP4 418 aa17.25■□□□□ 0.35
SMARCA4-215ENST00000590574 LINC00032P0C843 101 aa17.25■□□□□ 0.35
SMARCA4-215ENST00000590574 HOXB8P17481 243 aaPredicted RBP17.25■□□□□ 0.35
SMARCA4-215ENST00000590574 NOL11Q9H8H0 719 aaKnown RBP17.25■□□□□ 0.35
SMARCA4-215ENST00000590574 EGFL7Q9UHF1 273 aa17.25■□□□□ 0.35
SMARCA4-215ENST00000590574 KPNA6O60684 536 aa17.25■□□□□ 0.35
SMARCA4-215ENST00000590574 LRIG2O94898 1065 aa17.25■□□□□ 0.35
SMARCA4-215ENST00000590574 DCTN2Q13561 401 aaKnown RBP17.25■□□□□ 0.35
SMARCA4-215ENST00000590574 SDHAF4Q5VUM1 108 aa17.25■□□□□ 0.35
SMARCA4-215ENST00000590574 ACTRT2Q8TDY3 377 aa17.25■□□□□ 0.35
SMARCA4-215ENST00000590574 ADAM2Q99965 735 aa17.25■□□□□ 0.35
SMARCA4-215ENST00000590574 ZYG11BQ9C0D3 744 aa17.25■□□□□ 0.35
SMARCA4-215ENST00000590574 ATP13A1Q9HD20 1204 aa17.25■□□□□ 0.35
SMARCA4-215ENST00000590574 HCRTO43612 131 aa17.25■□□□□ 0.35
SMARCA4-215ENST00000590574 MT-CYBP00156 380 aaPredicted RBP17.25■□□□□ 0.35
SMARCA4-215ENST00000590574 NNMTP40261 264 aa17.25■□□□□ 0.35
SMARCA4-215ENST00000590574 LILRA4P59901 499 aa17.25■□□□□ 0.35
SMARCA4-215ENST00000590574 VAC14Q08AM6 782 aa17.25■□□□□ 0.35
SMARCA4-215ENST00000590574 TRIM16LQ309B1 348 aa17.25■□□□□ 0.35
SMARCA4-215ENST00000590574 CGB2Q6NT52 195 aa17.25■□□□□ 0.35
SMARCA4-215ENST00000590574 DLK2Q6UY11 383 aa17.25■□□□□ 0.35
SMARCA4-215ENST00000590574 RMND5AQ9H871 391 aa17.25■□□□□ 0.35
SMARCA4-215ENST00000590574 NMRK2Q9NPI5 230 aa17.25■□□□□ 0.35
SMARCA4-215ENST00000590574 VPS28Q9UK41 221 aa17.25■□□□□ 0.35
SMARCA4-215ENST00000590574 PAIP2BQ9ULR5 123 aaKnown RBP17.25■□□□□ 0.35
SMARCA4-215ENST00000590574 RAB26Q9ULW5 256 aa17.25■□□□□ 0.35
SMARCA4-215ENST00000590574 MAP3K13O43283 966 aa17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 IPO13O94829 963 aaKnown RBP17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 ZNF682O95780 498 aa17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 ITGAXP20702 1163 aa17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 PCYT1AP49585 367 aa17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 ILF2Q12905 390 aaKnown RBP17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 TARBP2Q15633 366 aaKnown RBP17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 IL27RAQ6UWB1 636 aa17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 CDHR3Q6ZTQ4 885 aa17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 HS6ST3Q8IZP7 471 aa17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 FSTL5Q8N475 847 aaPredicted RBP17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 SLC35F5Q8WV83 523 aa17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 PTCD3Q96EY7 689 aaKnown RBP17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 MAML3Q96JK9 1138 aa17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 TSPAN18Q96SJ8 248 aa17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 PNPLA3Q9NST1 481 aa17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 STK39Q9UEW8 545 aa17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 CNTN6Q9UQ52 1028 aa17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 TIPRLO75663 272 aa17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 RFPL1O75677 317 aa17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 BRCC3P46736 316 aa17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 SYPL2Q5VXT5 272 aa17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 DNAJC14Q6Y2X3 702 aaPredicted RBP17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 GPSM1Q86YR5 675 aa17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 DENND6AQ8IWF6 608 aa17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 FAM156AQ8NDB6 213 aa17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 NAT14Q8WUY8 206 aa17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 SIGLEC10Q96LC7 697 aa17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 TUBGCP5Q96RT8 1024 aa17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 SEMA3CQ99985 751 aa17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 DPY30Q9C005 99 aa17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 MARCH2Q9P0N8 246 aa17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 AHDC1Q5TGY3 1603 aaPredicted RBP17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 MYH4Q9Y623 1939 aa17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 NRP2O60462 931 aa17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 CYBBP04839 570 aa17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 CLK1P49759 484 aaKnown RBP17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 KPNA1P52294 538 aaPredicted RBP17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 NOL9Q5SY16 702 aaKnown RBP17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 SCIMPQ6UWF3 145 aa17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 SATL1Q86VE3 508 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms