RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 ATXN2Q99700 1313 aaKnown RBP21.55■■□□□ 1.04
ATG4D-212ENST00000590096 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.54■■□□□ 1.04
ATG4D-212ENST00000590096 GOLGA6L9A6NEM1 432 aa21.54■■□□□ 1.04
ATG4D-212ENST00000590096 SPEM2Q0P670 501 aa21.54■■□□□ 1.04
ATG4D-212ENST00000590096 SEL1L2Q5TEA6 688 aa21.54■■□□□ 1.04
ATG4D-212ENST00000590096 MEI1Q5TIA1 1274 aa21.54■■□□□ 1.04
ATG4D-212ENST00000590096 AADACL2Q6P093 401 aa21.54■■□□□ 1.04
ATG4D-212ENST00000590096 DCLK2Q8N568 766 aa21.54■■□□□ 1.04
ATG4D-212ENST00000590096 HCAR2Q8TDS4 363 aa21.54■■□□□ 1.04
ATG4D-212ENST00000590096 TFB1MQ8WVM0 346 aaKnown RBP21.54■■□□□ 1.04
ATG4D-212ENST00000590096 RAB7BQ96AH8 199 aa21.54■■□□□ 1.04
ATG4D-212ENST00000590096 PREBQ9HCU5 417 aa21.54■■□□□ 1.04
ATG4D-212ENST00000590096 SEPT10Q9P0V9 454 aa21.54■■□□□ 1.04
ATG4D-212ENST00000590096 DKK3Q9UBP4 350 aa21.54■■□□□ 1.04
ATG4D-212ENST00000590096 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.54■■□□□ 1.04
ATG4D-212ENST00000590096 GON4LQ3T8J9 2241 aa21.53■■□□□ 1.04
ATG4D-212ENST00000590096 ANKRD36A6QL64 1941 aa21.53■■□□□ 1.04
ATG4D-212ENST00000590096 KCNK1O00180 336 aa21.53■■□□□ 1.04
ATG4D-212ENST00000590096 JCHAINP01591 159 aa21.53■■□□□ 1.04
ATG4D-212ENST00000590096 CR2P20023 1033 aa21.53■■□□□ 1.04
ATG4D-212ENST00000590096 XPAP23025 273 aaPredicted RBP21.53■■□□□ 1.04
ATG4D-212ENST00000590096 HOXD12P35452 270 aa21.53■■□□□ 1.04
ATG4D-212ENST00000590096 IFI35P80217 286 aaPredicted RBP21.53■■□□□ 1.04
ATG4D-212ENST00000590096 BRAT1Q6PJG6 821 aa21.53■■□□□ 1.04
ATG4D-212ENST00000590096 RABEPKQ7Z6M1 372 aa21.53■■□□□ 1.04
ATG4D-212ENST00000590096 ZC3H18Q86VM9 953 aaKnown RBP21.53■■□□□ 1.04
ATG4D-212ENST00000590096 CAMK1DQ8IU85 385 aa21.53■■□□□ 1.04
ATG4D-212ENST00000590096 VOPP1Q96AW1 172 aa21.53■■□□□ 1.04
ATG4D-212ENST00000590096 BIRC7Q96CA5 298 aa21.53■■□□□ 1.04
ATG4D-212ENST00000590096 MIR1-1HGQ9H1L0 117 aa21.53■■□□□ 1.04
ATG4D-212ENST00000590096 VPS45Q9NRW7 570 aa21.53■■□□□ 1.04
ATG4D-212ENST00000590096 SUSD2Q9UGT4 822 aa21.53■■□□□ 1.04
ATG4D-212ENST00000590096 PILRBQ9UKJ0 227 aa21.53■■□□□ 1.04
ATG4D-212ENST00000590096 ZNF292O60281 2723 aa21.52■■□□□ 1.04
ATG4D-212ENST00000590096 TTC24A2A3L6 582 aaPredicted RBP21.52■■□□□ 1.04
ATG4D-212ENST00000590096 HACD1B0YJ81 288 aa21.52■■□□□ 1.04
ATG4D-212ENST00000590096 NEMP1O14524 444 aa21.52■■□□□ 1.04
ATG4D-212ENST00000590096 GJB3O75712 270 aa21.52■■□□□ 1.04
ATG4D-212ENST00000590096 PCDH8O95206 1070 aa21.52■■□□□ 1.04
ATG4D-212ENST00000590096 GNSP15586 552 aa21.52■■□□□ 1.04
ATG4D-212ENST00000590096 CES1P23141 567 aa21.52■■□□□ 1.04
ATG4D-212ENST00000590096 MAOBP27338 520 aa21.52■■□□□ 1.04
ATG4D-212ENST00000590096 CCR5P51681 352 aa21.52■■□□□ 1.04
ATG4D-212ENST00000590096 TAS2R38P59533 333 aa21.52■■□□□ 1.04
ATG4D-212ENST00000590096 PRKD1Q15139 912 aaPredicted RBP21.52■■□□□ 1.04
ATG4D-212ENST00000590096 CCDC6Q16204 474 aa21.52■■□□□ 1.04
ATG4D-212ENST00000590096 TTC7BQ86TV6 843 aa21.52■■□□□ 1.04
ATG4D-212ENST00000590096 REXO1L1PQ8IX06 675 aa21.52■■□□□ 1.04
ATG4D-212ENST00000590096 GPR161Q8N6U8 529 aaKnown RBP21.52■■□□□ 1.04
ATG4D-212ENST00000590096 DNASE2BQ8WZ79 361 aa21.52■■□□□ 1.04
ATG4D-212ENST00000590096 SEMA3CQ99985 751 aa21.52■■□□□ 1.04
ATG4D-212ENST00000590096 HERPUD2Q9BSE4 406 aa21.52■■□□□ 1.04
ATG4D-212ENST00000590096 NOD2Q9HC29 1040 aa21.52■■□□□ 1.04
ATG4D-212ENST00000590096 TRMT1Q9NXH9 659 aaKnown RBP21.52■■□□□ 1.04
ATG4D-212ENST00000590096 EIF2B4Q9UI10 523 aaKnown RBP21.52■■□□□ 1.04
ATG4D-212ENST00000590096 TSPAN11A1L157 253 aa21.51■■□□□ 1.03
ATG4D-212ENST00000590096 H7C0C1 242 aa21.51■■□□□ 1.03
ATG4D-212ENST00000590096 MTSS1O43312 755 aa21.51■■□□□ 1.03
ATG4D-212ENST00000590096 AP1G1O43747 822 aa21.51■■□□□ 1.03
ATG4D-212ENST00000590096 HLA-DQB2P05538 268 aa21.51■■□□□ 1.03
ATG4D-212ENST00000590096 IGHV4-34P06331 123 aa21.51■■□□□ 1.03
ATG4D-212ENST00000590096 ATP5OP48047 213 aa21.51■■□□□ 1.03
ATG4D-212ENST00000590096 SUOXP51687 545 aa21.51■■□□□ 1.03
ATG4D-212ENST00000590096 PPP2CBP62714 309 aa21.51■■□□□ 1.03
ATG4D-212ENST00000590096 PPP2CAP67775 309 aa21.51■■□□□ 1.03
ATG4D-212ENST00000590096 OTUD4Q01804 1114 aaKnown RBP21.51■■□□□ 1.03
ATG4D-212ENST00000590096 ZBTB17Q13105 803 aa21.51■■□□□ 1.03
ATG4D-212ENST00000590096 XRCC4Q13426 336 aa21.51■■□□□ 1.03
ATG4D-212ENST00000590096 NOMO1Q15155 1222 aa21.51■■□□□ 1.03
ATG4D-212ENST00000590096 PLA2G2CQ5R387 149 aa21.51■■□□□ 1.03
ATG4D-212ENST00000590096 PEAR1Q5VY43 1037 aaPredicted RBP21.51■■□□□ 1.03
ATG4D-212ENST00000590096 NEK5Q6P3R8 708 aa21.51■■□□□ 1.03
ATG4D-212ENST00000590096 B4GALNT4Q76KP1 1039 aa21.51■■□□□ 1.03
ATG4D-212ENST00000590096 PRPF39Q86UA1 669 aaKnown RBP21.51■■□□□ 1.03
ATG4D-212ENST00000590096 TRIM69Q86WT6 500 aa21.51■■□□□ 1.03
ATG4D-212ENST00000590096 CEP76Q8TAP6 659 aa21.51■■□□□ 1.03
ATG4D-212ENST00000590096 ACTL9Q8TC94 416 aa21.51■■□□□ 1.03
ATG4D-212ENST00000590096 IL12RB2Q99665 862 aa21.51■■□□□ 1.03
ATG4D-212ENST00000590096 FERMT1Q9BQL6 677 aa21.51■■□□□ 1.03
ATG4D-212ENST00000590096 SEMA4GQ9NTN9 838 aa21.51■■□□□ 1.03
ATG4D-212ENST00000590096 TMEM74BQ9NUR3 256 aa21.51■■□□□ 1.03
ATG4D-212ENST00000590096 FADS3Q9Y5Q0 445 aa21.51■■□□□ 1.03
ATG4D-212ENST00000590096 RNGTTO60942 597 aaKnown RBP21.5■■□□□ 1.03
ATG4D-212ENST00000590096 SOCS5O75159 536 aa21.5■■□□□ 1.03
ATG4D-212ENST00000590096 ZNF806P0C7X5 589 aa21.5■■□□□ 1.03
ATG4D-212ENST00000590096 TIMP2P16035 220 aa21.5■■□□□ 1.03
ATG4D-212ENST00000590096 CD27P26842 260 aa21.5■■□□□ 1.03
ATG4D-212ENST00000590096 ABL2P42684 1182 aa21.5■■□□□ 1.03
ATG4D-212ENST00000590096 CSRP2Q16527 193 aa21.5■■□□□ 1.03
ATG4D-212ENST00000590096 DUOXA1Q1HG43 343 aa21.5■■□□□ 1.03
ATG4D-212ENST00000590096 ALG1LQ6GMV1 187 aa21.5■■□□□ 1.03
ATG4D-212ENST00000590096 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.5■■□□□ 1.03
ATG4D-212ENST00000590096 TTC13Q8NBP0 860 aa21.5■■□□□ 1.03
ATG4D-212ENST00000590096 PDCD6IPQ8WUM4 868 aaKnown RBP21.5■■□□□ 1.03
ATG4D-212ENST00000590096 FEM1CQ96JP0 617 aa21.5■■□□□ 1.03
ATG4D-212ENST00000590096 QKIQ96PU8 341 aaKnown RBP eCLIP21.5■■□□□ 1.03
ATG4D-212ENST00000590096 CEP41Q9BYV8 373 aa21.5■■□□□ 1.03
ATG4D-212ENST00000590096 ATP8A1Q9Y2Q0 1164 aa21.5■■□□□ 1.03
ATG4D-212ENST00000590096 A0A1W2PPC4 97 aa21.49■■□□□ 1.03
ATG4D-212ENST00000590096 A0A1W2PQ67 120 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms