RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	GAREM1	Q9H706	876 aa		17.51	■□□□□ 0.39
MBD1-221	ENST00000589867	CAAP1	Q9H8G2	361 aa		17.51	■□□□□ 0.39
MBD1-221	ENST00000589867	FZD3	Q9NPG1	666 aa		17.51	■□□□□ 0.39
MBD1-221	ENST00000589867	DMTF1	Q9Y222	760 aa		17.51	■□□□□ 0.39
MBD1-221	ENST00000589867	DUSP10	Q9Y6W6	482 aa		17.51	■□□□□ 0.39
MBD1-221	ENST00000589867		A0A0A6YYK5	440 aa	Predicted RBP	17.5	■□□□□ 0.39
MBD1-221	ENST00000589867		A0A0U1RQJ8	604 aa		17.5	■□□□□ 0.39
MBD1-221	ENST00000589867		H0Y8X5	98 aa		17.5	■□□□□ 0.39
MBD1-221	ENST00000589867	TRAFD1	O14545	582 aa	Predicted RBP	17.5	■□□□□ 0.39
MBD1-221	ENST00000589867	PCDH8	O95206	1070 aa		17.5	■□□□□ 0.39
MBD1-221	ENST00000589867	CSRP1	P21291	193 aa	Known RBP	17.5	■□□□□ 0.39
MBD1-221	ENST00000589867	CYLC1	P35663	651 aa	Predicted RBP	17.5	■□□□□ 0.39
MBD1-221	ENST00000589867	ATXN3	P54252	364 aa	Predicted RBP	17.5	■□□□□ 0.39
MBD1-221	ENST00000589867	FAM193A	P78312	1265 aa		17.5	■□□□□ 0.39
MBD1-221	ENST00000589867	TEAD4	Q15561	434 aa		17.5	■□□□□ 0.39
MBD1-221	ENST00000589867	TAZ	Q16635	292 aa		17.5	■□□□□ 0.39
MBD1-221	ENST00000589867	PRAMEF14	Q5SWL7	426 aa		17.5	■□□□□ 0.39
MBD1-221	ENST00000589867	KDM7A	Q6ZMT4	941 aa		17.5	■□□□□ 0.39
MBD1-221	ENST00000589867	TEX26	Q8N6G2	289 aa		17.5	■□□□□ 0.39
MBD1-221	ENST00000589867	PLD5	Q8N7P1	536 aa		17.5	■□□□□ 0.39
MBD1-221	ENST00000589867	ACRBP	Q8NEB7	543 aa		17.5	■□□□□ 0.39
MBD1-221	ENST00000589867	DEFB124	Q8NES8	71 aa		17.5	■□□□□ 0.39
MBD1-221	ENST00000589867	RAB7B	Q96AH8	199 aa		17.5	■□□□□ 0.39
MBD1-221	ENST00000589867	ECHDC3	Q96DC8	303 aa		17.5	■□□□□ 0.39
MBD1-221	ENST00000589867	CAMK1G	Q96NX5	476 aa		17.5	■□□□□ 0.39
MBD1-221	ENST00000589867	KLF6	Q99612	283 aa	Predicted RBP	17.5	■□□□□ 0.39
MBD1-221	ENST00000589867	AASDHPPT	Q9NRN7	309 aa		17.5	■□□□□ 0.39
MBD1-221	ENST00000589867	SEPT3	Q9UH03	358 aa		17.5	■□□□□ 0.39
MBD1-221	ENST00000589867	ALG6	Q9Y672	507 aa		17.5	■□□□□ 0.39
MBD1-221	ENST00000589867	LRRD1	A4D1F6	860 aa		17.49	■□□□□ 0.39
MBD1-221	ENST00000589867	IGLON5	A6NGN9	336 aa		17.49	■□□□□ 0.39
MBD1-221	ENST00000589867	ZNF487	B1APH4	448 aa		17.49	■□□□□ 0.39
MBD1-221	ENST00000589867	ZNF883	P0CG24	379 aa		17.49	■□□□□ 0.39
MBD1-221	ENST00000589867	SERPINB6	P35237	376 aa		17.49	■□□□□ 0.39
MBD1-221	ENST00000589867	NUDT1	P36639	197 aa		17.49	■□□□□ 0.39
MBD1-221	ENST00000589867	GARS	P41250	739 aa	Known RBP	17.49	■□□□□ 0.39
MBD1-221	ENST00000589867	SLC1A1	P43005	524 aa		17.49	■□□□□ 0.39
MBD1-221	ENST00000589867	MARCKSL1	P49006	195 aa		17.49	■□□□□ 0.39
MBD1-221	ENST00000589867	NXPH1	P58417	271 aa		17.49	■□□□□ 0.39
MBD1-221	ENST00000589867	CCDC15	Q0P6D6	951 aa		17.49	■□□□□ 0.39
MBD1-221	ENST00000589867	SETMAR	Q53H47	684 aa	Predicted RBP	17.49	■□□□□ 0.39
MBD1-221	ENST00000589867	FAM182A	Q5T1J6	154 aa		17.49	■□□□□ 0.39
MBD1-221	ENST00000589867	SLC9A4	Q6AI14	798 aa		17.49	■□□□□ 0.39
MBD1-221	ENST00000589867	PSAPL1	Q6NUJ1	521 aa		17.49	■□□□□ 0.39
MBD1-221	ENST00000589867	GCNT7	Q6ZNI0	430 aa		17.49	■□□□□ 0.39
MBD1-221	ENST00000589867	ATPAF2	Q8N5M1	289 aa		17.49	■□□□□ 0.39
MBD1-221	ENST00000589867	MFSD2A	Q8NA29	543 aa		17.49	■□□□□ 0.39
MBD1-221	ENST00000589867	SPC24	Q8NBT2	197 aa		17.49	■□□□□ 0.39
MBD1-221	ENST00000589867	TPCN2	Q8NHX9	752 aa		17.49	■□□□□ 0.39
MBD1-221	ENST00000589867	MAML1	Q92585	1016 aa		17.49	■□□□□ 0.39
MBD1-221	ENST00000589867	BMF	Q96LC9	184 aa		17.49	■□□□□ 0.39
MBD1-221	ENST00000589867	TUBGCP5	Q96RT8	1024 aa		17.49	■□□□□ 0.39
MBD1-221	ENST00000589867	MYOC	Q99972	504 aa		17.49	■□□□□ 0.39
MBD1-221	ENST00000589867	MGME1	Q9BQP7	344 aa		17.49	■□□□□ 0.39
MBD1-221	ENST00000589867	CINP	Q9BW66	212 aa	Predicted RBP	17.49	■□□□□ 0.39
MBD1-221	ENST00000589867	C1QTNF2	Q9BXJ5	285 aa		17.49	■□□□□ 0.39
MBD1-221	ENST00000589867	DTL	Q9NZJ0	730 aa		17.49	■□□□□ 0.39
MBD1-221	ENST00000589867	CEP295	Q9C0D2	2601 aa		17.49	■□□□□ 0.39
MBD1-221	ENST00000589867	PRAMEF26	H0Y7S4	382 aa		17.48	■□□□□ 0.39
MBD1-221	ENST00000589867	TLR4	O00206	839 aa		17.48	■□□□□ 0.39
MBD1-221	ENST00000589867	TSPAN6	O43657	245 aa		17.48	■□□□□ 0.39
MBD1-221	ENST00000589867	SH3BP5	O60239	455 aa		17.48	■□□□□ 0.39
MBD1-221	ENST00000589867	CBFA2T3	O75081	653 aa		17.48	■□□□□ 0.39
MBD1-221	ENST00000589867	CER1	O95813	267 aa		17.48	■□□□□ 0.39
MBD1-221	ENST00000589867	PRKCG	P05129	697 aa		17.48	■□□□□ 0.39
MBD1-221	ENST00000589867	CLDN2	P57739	230 aa		17.48	■□□□□ 0.39
MBD1-221	ENST00000589867	MAX	P61244	160 aa		17.48	■□□□□ 0.39
MBD1-221	ENST00000589867	RAD51	Q06609	339 aa		17.48	■□□□□ 0.39
MBD1-221	ENST00000589867	SLC14A1	Q13336	389 aa		17.48	■□□□□ 0.39
MBD1-221	ENST00000589867	SPA17	Q15506	151 aa		17.48	■□□□□ 0.39
MBD1-221	ENST00000589867	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	17.48	■□□□□ 0.39
MBD1-221	ENST00000589867	KIAA1161	Q6NSJ0	714 aa		17.48	■□□□□ 0.39
MBD1-221	ENST00000589867	IL27RA	Q6UWB1	636 aa		17.48	■□□□□ 0.39
MBD1-221	ENST00000589867	MFSD7	Q6UXD7	560 aa		17.48	■□□□□ 0.39
MBD1-221	ENST00000589867	ABI3BP	Q7Z7G0	1075 aa		17.48	■□□□□ 0.39
MBD1-221	ENST00000589867	TTC7B	Q86TV6	843 aa		17.48	■□□□□ 0.39
MBD1-221	ENST00000589867	VSIG1	Q86XK7	387 aa		17.48	■□□□□ 0.39
MBD1-221	ENST00000589867	MAP7D3	Q8IWC1	876 aa		17.48	■□□□□ 0.39
MBD1-221	ENST00000589867	HCAR2	Q8TDS4	363 aa		17.48	■□□□□ 0.39
MBD1-221	ENST00000589867	ZNF641	Q96N77	438 aa	Predicted RBP	17.48	■□□□□ 0.39
MBD1-221	ENST00000589867	TSGA13	Q96PP4	275 aa		17.48	■□□□□ 0.39
MBD1-221	ENST00000589867	SLC17A9	Q9BYT1	436 aa		17.48	■□□□□ 0.39
MBD1-221	ENST00000589867	GPR27	Q9NS67	375 aa		17.48	■□□□□ 0.39
MBD1-221	ENST00000589867	TM7SF3	Q9NS93	570 aa		17.48	■□□□□ 0.39
MBD1-221	ENST00000589867	IMPACT	Q9P2X3	320 aa		17.48	■□□□□ 0.39
MBD1-221	ENST00000589867	TPR	P12270	2363 aa	Known RBP	17.48	■□□□□ 0.39
MBD1-221	ENST00000589867	TDRD6	O60522	2096 aa	Known RBP	17.48	■□□□□ 0.39
MBD1-221	ENST00000589867	CHD8	Q9HCK8	2581 aa		17.47	■□□□□ 0.39
MBD1-221	ENST00000589867		A0A1B0GTQ1	180 aa		17.47	■□□□□ 0.39
MBD1-221	ENST00000589867	PJA2	O43164	708 aa		17.47	■□□□□ 0.39
MBD1-221	ENST00000589867	PAK4	O96013	591 aa	Predicted RBP	17.47	■□□□□ 0.39
MBD1-221	ENST00000589867	HNRNPA2B1	P22626	353 aa	Known RBP	17.47	■□□□□ 0.39
MBD1-221	ENST00000589867	NOP2	P46087	812 aa	Known RBP	17.47	■□□□□ 0.39
MBD1-221	ENST00000589867	SCNN1B	P51168	640 aa		17.47	■□□□□ 0.39
MBD1-221	ENST00000589867	NOVA1	P51513	510 aa	Known RBP	17.47	■□□□□ 0.39
MBD1-221	ENST00000589867	RPS21	P63220	83 aa	Known RBP	17.47	■□□□□ 0.39
MBD1-221	ENST00000589867	SEMG2	Q02383	582 aa		17.47	■□□□□ 0.39
MBD1-221	ENST00000589867	ADCY2	Q08462	1091 aa		17.47	■□□□□ 0.39
MBD1-221	ENST00000589867	UGP2	Q16851	508 aa		17.47	■□□□□ 0.39
MBD1-221	ENST00000589867	TMEM52B	Q4KMG9	183 aa		17.47	■□□□□ 0.39

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