RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 PTK2BQ14289 1009 aa14.54□□□□□ -0.08
MBD1-220ENST00000589758 COL28A1Q2UY09 1125 aa14.54□□□□□ -0.08
MBD1-220ENST00000589758 ZNF542PQ5EBM4 170 aa14.54□□□□□ -0.08
MBD1-220ENST00000589758 PLEKHA7Q6IQ23 1121 aa14.54□□□□□ -0.08
MBD1-220ENST00000589758 DCBLD1Q8N8Z6 715 aa14.54□□□□□ -0.08
MBD1-220ENST00000589758 HCAR2Q8TDS4 363 aa14.54□□□□□ -0.08
MBD1-220ENST00000589758 CXorf40AQ8TE69 158 aa14.54□□□□□ -0.08
MBD1-220ENST00000589758 BTN2A2Q8WVV5 523 aa14.54□□□□□ -0.08
MBD1-220ENST00000589758 HNRNPLLQ8WVV9 542 aaKnown RBP14.54□□□□□ -0.08
MBD1-220ENST00000589758 VOPP1Q96AW1 172 aa14.54□□□□□ -0.08
MBD1-220ENST00000589758 CENPTQ96BT3 561 aa14.54□□□□□ -0.08
MBD1-220ENST00000589758 RBSNQ9H1K0 784 aa14.54□□□□□ -0.08
MBD1-220ENST00000589758 NCKIPSDQ9NZQ3 722 aa14.54□□□□□ -0.08
MBD1-220ENST00000589758 ITM2BQ9Y287 266 aa14.54□□□□□ -0.08
MBD1-220ENST00000589758 AK5Q9Y6K8 562 aa14.54□□□□□ -0.08
MBD1-220ENST00000589758 CACNA1GO43497 2377 aa14.54□□□□□ -0.08
MBD1-220ENST00000589758 FAM208BQ5VWN6 2430 aa14.54□□□□□ -0.08
MBD1-220ENST00000589758 TDRD6O60522 2096 aaKnown RBP14.53□□□□□ -0.08
MBD1-220ENST00000589758 TMCO5BA8MYB1 307 aa14.53□□□□□ -0.08
MBD1-220ENST00000589758 K7ESM1 405 aa14.53□□□□□ -0.08
MBD1-220ENST00000589758 TOR1BO14657 336 aa14.53□□□□□ -0.08
MBD1-220ENST00000589758 SPINT1O43278 529 aa14.53□□□□□ -0.08
MBD1-220ENST00000589758 RNF8O76064 485 aa14.53□□□□□ -0.08
MBD1-220ENST00000589758 GP1BAP07359 652 aa14.53□□□□□ -0.08
MBD1-220ENST00000589758 GZMAP12544 262 aa14.53□□□□□ -0.08
MBD1-220ENST00000589758 XPAP23025 273 aaPredicted RBP14.53□□□□□ -0.08
MBD1-220ENST00000589758 PSMA2P25787 234 aa14.53□□□□□ -0.08
MBD1-220ENST00000589758 THOP1P52888 689 aa14.53□□□□□ -0.08
MBD1-220ENST00000589758 CLDN6P56747 220 aa14.53□□□□□ -0.08
MBD1-220ENST00000589758 ELP6Q0PNE2 266 aa14.53□□□□□ -0.08
MBD1-220ENST00000589758 CYTH1Q15438 398 aa14.53□□□□□ -0.08
MBD1-220ENST00000589758 ERMARDQ5T6L9 678 aa14.53□□□□□ -0.08
MBD1-220ENST00000589758 E4F1Q66K89 784 aaPredicted RBP14.53□□□□□ -0.08
MBD1-220ENST00000589758 DNAAF5Q86Y56 855 aa14.53□□□□□ -0.08
MBD1-220ENST00000589758 ZNF548Q8NEK5 533 aaPredicted RBP14.53□□□□□ -0.08
MBD1-220ENST00000589758 APOLD1Q96LR9 279 aa14.53□□□□□ -0.08
MBD1-220ENST00000589758 NCAPGQ9BPX3 1015 aa14.53□□□□□ -0.08
MBD1-220ENST00000589758 KLC2Q9H0B6 622 aa14.53□□□□□ -0.08
MBD1-220ENST00000589758 DHX35Q9H5Z1 703 aaKnown RBP14.53□□□□□ -0.08
MBD1-220ENST00000589758 HAUS4Q9H6D7 363 aa14.53□□□□□ -0.08
MBD1-220ENST00000589758 TAS2R14Q9NYV8 317 aa14.53□□□□□ -0.08
MBD1-220ENST00000589758 AIPL1Q9NZN9 384 aa14.53□□□□□ -0.08
MBD1-220ENST00000589758 UBA2Q9UBT2 640 aaPredicted RBP14.53□□□□□ -0.08
MBD1-220ENST00000589758 GGT7Q9UJ14 662 aa14.53□□□□□ -0.08
MBD1-220ENST00000589758 AP4E1Q9UPM8 1137 aa14.53□□□□□ -0.08
MBD1-220ENST00000589758 KNTC1P50748 2209 aa14.53□□□□□ -0.08
MBD1-220ENST00000589758 EEF2KO00418 725 aaKnown RBP14.52□□□□□ -0.09
MBD1-220ENST00000589758 TPP1O14773 563 aa14.52□□□□□ -0.09
MBD1-220ENST00000589758 MT-CO3P00414 261 aa14.52□□□□□ -0.09
MBD1-220ENST00000589758 SKILP12757 684 aa14.52□□□□□ -0.09
MBD1-220ENST00000589758 TIMP2P16035 220 aa14.52□□□□□ -0.09
MBD1-220ENST00000589758 JUNDP17535 347 aa14.52□□□□□ -0.09
MBD1-220ENST00000589758 PRKCIP41743 596 aa14.52□□□□□ -0.09
MBD1-220ENST00000589758 ZNF135P52742 658 aaPredicted RBP14.52□□□□□ -0.09
MBD1-220ENST00000589758 TMEM52BQ4KMG9 183 aa14.52□□□□□ -0.09
MBD1-220ENST00000589758 FIGNQ5HY92 759 aa14.52□□□□□ -0.09
MBD1-220ENST00000589758 ZCCHC8Q6NZY4 707 aaKnown RBP14.52□□□□□ -0.09
MBD1-220ENST00000589758 PDZD3Q86UT5 571 aa14.52□□□□□ -0.09
MBD1-220ENST00000589758 GAS2L3Q86XJ1 694 aa14.52□□□□□ -0.09
MBD1-220ENST00000589758 PSTKQ8IV42 348 aaKnown RBP14.52□□□□□ -0.09
MBD1-220ENST00000589758 FNIP1Q8TF40 1166 aa14.52□□□□□ -0.09
MBD1-220ENST00000589758 ZNF641Q96N77 438 aaPredicted RBP14.52□□□□□ -0.09
MBD1-220ENST00000589758 EDEM3Q9BZQ6 932 aa14.52□□□□□ -0.09
MBD1-220ENST00000589758 SUV39H2Q9H5I1 410 aa14.52□□□□□ -0.09
MBD1-220ENST00000589758 LRRC19Q9H756 370 aa14.52□□□□□ -0.09
MBD1-220ENST00000589758 SPASTQ9UBP0 616 aa14.52□□□□□ -0.09
MBD1-220ENST00000589758 LHX3Q9UBR4 397 aa14.52□□□□□ -0.09
MBD1-220ENST00000589758 SALL4Q9UJQ4 1053 aa14.52□□□□□ -0.09
MBD1-220ENST00000589758 MYLKQ15746 1914 aa14.52□□□□□ -0.09
MBD1-220ENST00000589758 BAHCC1Q9P281 2608 aa14.51□□□□□ -0.09
MBD1-220ENST00000589758 PKD1L2Q7Z442 2459 aa14.51□□□□□ -0.09
MBD1-220ENST00000589758 TSPAN11A1L157 253 aa14.51□□□□□ -0.09
MBD1-220ENST00000589758 TMEM191CA6NGB0 347 aa14.51□□□□□ -0.09
MBD1-220ENST00000589758 ARHGAP42A6NI28 874 aa14.51□□□□□ -0.09
MBD1-220ENST00000589758 INSIG1O15503 277 aa14.51□□□□□ -0.09
MBD1-220ENST00000589758 DAPK3O43293 454 aa14.51□□□□□ -0.09
MBD1-220ENST00000589758 AQP9O43315 295 aa14.51□□□□□ -0.09
MBD1-220ENST00000589758 PRPSAP2O60256 369 aa14.51□□□□□ -0.09
MBD1-220ENST00000589758 PRAMEF11O60813 436 aa14.51□□□□□ -0.09
MBD1-220ENST00000589758 MMP20O60882 483 aa14.51□□□□□ -0.09
MBD1-220ENST00000589758 FTLP02792 175 aaPredicted RBP14.51□□□□□ -0.09
MBD1-220ENST00000589758 GYPCP04921 128 aa14.51□□□□□ -0.09
MBD1-220ENST00000589758 CSNK1DP48730 415 aa14.51□□□□□ -0.09
MBD1-220ENST00000589758 SEMG2Q02383 582 aa14.51□□□□□ -0.09
MBD1-220ENST00000589758 KLHL30Q0D2K2 578 aa14.51□□□□□ -0.09
MBD1-220ENST00000589758 CFAP58Q5T655 872 aa14.51□□□□□ -0.09
MBD1-220ENST00000589758 BRAT1Q6PJG6 821 aa14.51□□□□□ -0.09
MBD1-220ENST00000589758 VPS36Q86VN1 386 aa14.51□□□□□ -0.09
MBD1-220ENST00000589758 LMX1AQ8TE12 382 aa14.51□□□□□ -0.09
MBD1-220ENST00000589758 TRIM11Q96F44 468 aa14.51□□□□□ -0.09
MBD1-220ENST00000589758 TBATAQ96M53 351 aa14.51□□□□□ -0.09
MBD1-220ENST00000589758 DEPDC7Q96QD5 511 aa14.51□□□□□ -0.09
MBD1-220ENST00000589758 TUBGCP5Q96RT8 1024 aa14.51□□□□□ -0.09
MBD1-220ENST00000589758 IL12RB2Q99665 862 aa14.51□□□□□ -0.09
MBD1-220ENST00000589758 SNRNP25Q9BV90 132 aaKnown RBP14.51□□□□□ -0.09
MBD1-220ENST00000589758 TRIM5Q9C035 493 aa14.51□□□□□ -0.09
MBD1-220ENST00000589758 SLC39A8Q9C0K1 460 aa14.51□□□□□ -0.09
MBD1-220ENST00000589758 PDFQ9HBH1 243 aa14.51□□□□□ -0.09
MBD1-220ENST00000589758 MRPL47Q9HD33 250 aaKnown RBP14.51□□□□□ -0.09
MBD1-220ENST00000589758 GPATCH2LQ9NWQ4 482 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms