RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 LMLNQ96KR4 655 aa3.67□□□□□ -1.82
SMAD4-207ENST00000589076 MPHOSPH8Q99549 860 aa3.67□□□□□ -1.82
SMAD4-207ENST00000589076 USP44Q9H0E7 712 aa3.67□□□□□ -1.82
SMAD4-207ENST00000589076 TTYH1Q9H313 450 aaPredicted RBP3.67□□□□□ -1.82
SMAD4-207ENST00000589076 FZD3Q9NPG1 666 aa3.67□□□□□ -1.82
SMAD4-207ENST00000589076 RNF146Q9NTX7 359 aa3.67□□□□□ -1.82
SMAD4-207ENST00000589076 TBC1D22BQ9NU19 505 aa3.67□□□□□ -1.82
SMAD4-207ENST00000589076 BLOC1S4Q9NUP1 217 aa3.67□□□□□ -1.82
SMAD4-207ENST00000589076 ZDHHC7Q9NXF8 308 aa3.67□□□□□ -1.82
SMAD4-207ENST00000589076 FBXO9Q9UK97 447 aaPredicted RBP3.67□□□□□ -1.82
SMAD4-207ENST00000589076 COG5Q9UP83 839 aa3.67□□□□□ -1.82
SMAD4-207ENST00000589076 PCDHGB5Q9Y5G0 923 aa3.67□□□□□ -1.82
SMAD4-207ENST00000589076 SLC4A4Q9Y6R1 1079 aa3.67□□□□□ -1.82
SMAD4-207ENST00000589076 TEX13CA0A0J9YWL9 993 aa3.66□□□□□ -1.82
SMAD4-207ENST00000589076 TMEM272A0A1B0GTI8 110 aa3.66□□□□□ -1.82
SMAD4-207ENST00000589076 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.66□□□□□ -1.82
SMAD4-207ENST00000589076 A0A1W2PQM1 296 aa3.66□□□□□ -1.82
SMAD4-207ENST00000589076 C17orf102A2RUQ5 167 aa3.66□□□□□ -1.82
SMAD4-207ENST00000589076 PABPN1LA6NDY0 278 aaKnown RBP3.66□□□□□ -1.82
SMAD4-207ENST00000589076 PGPEP1LA6NFU8 196 aa3.66□□□□□ -1.82
SMAD4-207ENST00000589076 TNFSF14O43557 240 aa3.66□□□□□ -1.82
SMAD4-207ENST00000589076 GAS8-AS1O95177 125 aa3.66□□□□□ -1.82
SMAD4-207ENST00000589076 CD72P21854 359 aa3.66□□□□□ -1.82
SMAD4-207ENST00000589076 TNFRSF8P28908 595 aa3.66□□□□□ -1.82
SMAD4-207ENST00000589076 FMO4P31512 558 aa3.66□□□□□ -1.82
SMAD4-207ENST00000589076 CPOXP36551 454 aa3.66□□□□□ -1.82
SMAD4-207ENST00000589076 POLD2P49005 469 aa3.66□□□□□ -1.82
SMAD4-207ENST00000589076 CLCNKBP51801 687 aa3.66□□□□□ -1.82
SMAD4-207ENST00000589076 CLNS1AP54105 237 aaKnown RBP3.66□□□□□ -1.82
SMAD4-207ENST00000589076 ARSFP54793 590 aa3.66□□□□□ -1.82
SMAD4-207ENST00000589076 GAS1P54826 345 aa3.66□□□□□ -1.82
SMAD4-207ENST00000589076 EIF3BP55884 814 aaKnown RBP3.66□□□□□ -1.82
SMAD4-207ENST00000589076 DCAF7P61962 342 aa3.66□□□□□ -1.82
SMAD4-207ENST00000589076 FOXD4Q12950 439 aaPredicted RBP3.66□□□□□ -1.82
SMAD4-207ENST00000589076 PTGR1Q14914 329 aa3.66□□□□□ -1.82
SMAD4-207ENST00000589076 TAF11Q15544 211 aa3.66□□□□□ -1.82
SMAD4-207ENST00000589076 INPP5JQ15735 1006 aaPredicted RBP3.66□□□□□ -1.82
SMAD4-207ENST00000589076 SYTL3Q4VX76 610 aa3.66□□□□□ -1.82
SMAD4-207ENST00000589076 ZNF667Q5HYK9 610 aa3.66□□□□□ -1.82
SMAD4-207ENST00000589076 KDELC2Q7Z4H8 507 aa3.66□□□□□ -1.82
SMAD4-207ENST00000589076 DDIASQ8IXT1 998 aa3.66□□□□□ -1.82
SMAD4-207ENST00000589076 ZDHHC23Q8IYP9 409 aa3.66□□□□□ -1.82
SMAD4-207ENST00000589076 NGEFQ8N5V2 710 aa3.66□□□□□ -1.82
SMAD4-207ENST00000589076 DPP10Q8N608 796 aa3.66□□□□□ -1.82
SMAD4-207ENST00000589076 ETNPPLQ8TBG4 499 aa3.66□□□□□ -1.82
SMAD4-207ENST00000589076 METTL6Q8TCB7 284 aa3.66□□□□□ -1.82
SMAD4-207ENST00000589076 GDPD5Q8WTR4 605 aa3.66□□□□□ -1.82
SMAD4-207ENST00000589076 TREX2Q9BQ50 279 aaPredicted RBP3.66□□□□□ -1.82
SMAD4-207ENST00000589076 LBHD1Q9BQE6 289 aaPredicted RBP3.66□□□□□ -1.82
SMAD4-207ENST00000589076 WDR83Q9BRX9 315 aaKnown RBP3.66□□□□□ -1.82
SMAD4-207ENST00000589076 SLC25A18Q9H1K4 315 aa3.66□□□□□ -1.82
SMAD4-207ENST00000589076 RANBP17Q9H2T7 1088 aaKnown RBP3.66□□□□□ -1.82
SMAD4-207ENST00000589076 PLEKHA5Q9HAU0 1116 aa3.66□□□□□ -1.82
SMAD4-207ENST00000589076 SPAG4Q9NPE6 437 aa3.66□□□□□ -1.82
SMAD4-207ENST00000589076 PNRC2Q9NPJ4 139 aaKnown RBP3.66□□□□□ -1.82
SMAD4-207ENST00000589076 HIF1ANQ9NWT6 349 aa3.66□□□□□ -1.82
SMAD4-207ENST00000589076 KIAA1456Q9P272 454 aa3.66□□□□□ -1.82
SMAD4-207ENST00000589076 SWAP70Q9UH65 585 aa3.66□□□□□ -1.82
SMAD4-207ENST00000589076 CDH22Q9UJ99 828 aa3.66□□□□□ -1.82
SMAD4-207ENST00000589076 FBXO2Q9UK22 296 aaPredicted RBP3.66□□□□□ -1.82
SMAD4-207ENST00000589076 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.66□□□□□ -1.82
SMAD4-207ENST00000589076 NOTCH4Q99466 2003 aa3.65□□□□□ -1.82
SMAD4-207ENST00000589076 A0A0A0MQY5 61 aa3.65□□□□□ -1.83
SMAD4-207ENST00000589076 PI4KAP2A4QPH2 592 aa3.65□□□□□ -1.83
SMAD4-207ENST00000589076 TTC36A6NLP5 189 aa3.65□□□□□ -1.83
SMAD4-207ENST00000589076 IFITM10A6NMD0 228 aa3.65□□□□□ -1.83
SMAD4-207ENST00000589076 ZBED4O75132 1171 aa3.65□□□□□ -1.83
SMAD4-207ENST00000589076 RNASEH2AO75792 299 aaKnown RBP3.65□□□□□ -1.83
SMAD4-207ENST00000589076 SEC14L2O76054 403 aa3.65□□□□□ -1.83
SMAD4-207ENST00000589076 CLEC3BP05452 202 aa3.65□□□□□ -1.83
SMAD4-207ENST00000589076 GALTP07902 379 aa3.65□□□□□ -1.83
SMAD4-207ENST00000589076 DPP6P42658 865 aa3.65□□□□□ -1.83
SMAD4-207ENST00000589076 HARS2P49590 506 aaKnown RBP3.65□□□□□ -1.83
SMAD4-207ENST00000589076 RPL7AP62424 266 aaKnown RBP3.65□□□□□ -1.83
SMAD4-207ENST00000589076 RPL36AP83881 106 aaKnown RBP3.65□□□□□ -1.83
SMAD4-207ENST00000589076 NEXNQ0ZGT2 675 aa3.65□□□□□ -1.83
SMAD4-207ENST00000589076 DCTN2Q13561 401 aaKnown RBP3.65□□□□□ -1.83
SMAD4-207ENST00000589076 GSTA3Q16772 222 aa3.65□□□□□ -1.83
SMAD4-207ENST00000589076 ME3Q16798 604 aa3.65□□□□□ -1.83
SMAD4-207ENST00000589076 PIK3CD-AS1Q5SR53 167 aa3.65□□□□□ -1.83
SMAD4-207ENST00000589076 SERTAD4-AS1Q5TG53 156 aa3.65□□□□□ -1.83
SMAD4-207ENST00000589076 TBC1D9BQ66K14 1250 aa3.65□□□□□ -1.83
SMAD4-207ENST00000589076 ATG9BQ674R7 924 aa3.65□□□□□ -1.83
SMAD4-207ENST00000589076 NCAPH2Q6IBW4 605 aa3.65□□□□□ -1.83
SMAD4-207ENST00000589076 FAM83HQ6ZRV2 1179 aaPredicted RBP3.65□□□□□ -1.83
SMAD4-207ENST00000589076 FAM160B2Q86V87 743 aa3.65□□□□□ -1.83
SMAD4-207ENST00000589076 CCDC105Q8IYK2 499 aa3.65□□□□□ -1.83
SMAD4-207ENST00000589076 SLC25A41Q8N5S1 370 aa3.65□□□□□ -1.83
SMAD4-207ENST00000589076 ANKRD52Q8NB46 1076 aa3.65□□□□□ -1.83
SMAD4-207ENST00000589076 OR4N2Q8NGD1 307 aa3.65□□□□□ -1.83
SMAD4-207ENST00000589076 IGFBPL1Q8WX77 278 aa3.65□□□□□ -1.83
SMAD4-207ENST00000589076 KLHL29Q96CT2 875 aa3.65□□□□□ -1.83
SMAD4-207ENST00000589076 ZNF333Q96JL9 665 aa3.65□□□□□ -1.83
SMAD4-207ENST00000589076 KLHL15Q96M94 604 aa3.65□□□□□ -1.83
SMAD4-207ENST00000589076 TIGD1Q96MW7 591 aa3.65□□□□□ -1.83
SMAD4-207ENST00000589076 CXorf56Q9H5V9 222 aa3.65□□□□□ -1.83
SMAD4-207ENST00000589076 PRKRIP1Q9H875 184 aaPredicted RBP3.65□□□□□ -1.83
SMAD4-207ENST00000589076 THSD1Q9NS62 852 aa3.65□□□□□ -1.83
SMAD4-207ENST00000589076 DIAPH3Q9NSV4 1193 aa3.65□□□□□ -1.83
SMAD4-207ENST00000589076 TERF2IPQ9NYB0 399 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms