RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 CEP44Q9C0F1 390 aa22.5■■□□□ 1.19
ATG4D-209ENST00000588857 BRD9Q9H8M2 597 aa22.5■■□□□ 1.19
ATG4D-209ENST00000588857 ERVW-1Q9UQF0 538 aa22.5■■□□□ 1.19
ATG4D-209ENST00000588857 NFS1Q9Y697 457 aa22.5■■□□□ 1.19
ATG4D-209ENST00000588857 COL4A3Q01955 1670 aa22.5■■□□□ 1.19
ATG4D-209ENST00000588857 OPA1O60313 960 aa22.5■■□□□ 1.19
ATG4D-209ENST00000588857 IGSF6O95976 241 aa22.5■■□□□ 1.19
ATG4D-209ENST00000588857 EPOP01588 193 aa22.5■■□□□ 1.19
ATG4D-209ENST00000588857 ASLP04424 464 aa22.5■■□□□ 1.19
ATG4D-209ENST00000588857 GSTA2P09210 222 aa22.5■■□□□ 1.19
ATG4D-209ENST00000588857 CA4P22748 312 aa22.5■■□□□ 1.19
ATG4D-209ENST00000588857 GJA4P35212 333 aa22.5■■□□□ 1.19
ATG4D-209ENST00000588857 MAPK8P45983 427 aa22.5■■□□□ 1.19
ATG4D-209ENST00000588857 AP1S1P61966 158 aa22.5■■□□□ 1.19
ATG4D-209ENST00000588857 CEP85LQ5SZL2 805 aa22.5■■□□□ 1.19
ATG4D-209ENST00000588857 DENND5AQ6IQ26 1287 aa22.5■■□□□ 1.19
ATG4D-209ENST00000588857 NCEH1Q6PIU2 408 aa22.5■■□□□ 1.19
ATG4D-209ENST00000588857 SLC25A41Q8N5S1 370 aa22.5■■□□□ 1.19
ATG4D-209ENST00000588857 ARNT2Q9HBZ2 717 aa22.5■■□□□ 1.19
ATG4D-209ENST00000588857 BDP1A6H8Y1 2624 aa22.49■■□□□ 1.19
ATG4D-209ENST00000588857 TICRRQ7Z2Z1 1910 aa22.49■■□□□ 1.19
ATG4D-209ENST00000588857 LOC285095A0A1B0GVY8 99 aa22.49■■□□□ 1.19
ATG4D-209ENST00000588857 MAGEB16A2A368 324 aa22.49■■□□□ 1.19
ATG4D-209ENST00000588857 GOLGA6L10A6NI86 522 aa22.49■■□□□ 1.19
ATG4D-209ENST00000588857 AGPSO00116 658 aa22.49■■□□□ 1.19
ATG4D-209ENST00000588857 ATP9BO43861 1147 aa22.49■■□□□ 1.19
ATG4D-209ENST00000588857 PGAM1P18669 254 aa22.49■■□□□ 1.19
ATG4D-209ENST00000588857 CSNK1DP48730 415 aa22.49■■□□□ 1.19
ATG4D-209ENST00000588857 SNRPD1P62314 119 aaKnown RBP22.49■■□□□ 1.19
ATG4D-209ENST00000588857 KDSRQ06136 332 aa22.49■■□□□ 1.19
ATG4D-209ENST00000588857 ZNF844Q08AG5 666 aa22.49■■□□□ 1.19
ATG4D-209ENST00000588857 SLC1A5Q15758 541 aa22.49■■□□□ 1.19
ATG4D-209ENST00000588857 DGKKQ5KSL6 1271 aa22.49■■□□□ 1.19
ATG4D-209ENST00000588857 C22orf39Q6P5X5 142 aa22.49■■□□□ 1.19
ATG4D-209ENST00000588857 RYBPQ8N488 228 aaPredicted RBP22.49■■□□□ 1.19
ATG4D-209ENST00000588857 TNKS2Q9H2K2 1166 aa22.49■■□□□ 1.19
ATG4D-209ENST00000588857 SLCO3A1Q9UIG8 710 aa22.49■■□□□ 1.19
ATG4D-209ENST00000588857 SLC8A2Q9UPR5 921 aa22.49■■□□□ 1.19
ATG4D-209ENST00000588857 ARIH1Q9Y4X5 557 aaPredicted RBP22.49■■□□□ 1.19
ATG4D-209ENST00000588857 MYLKQ15746 1914 aa22.48■■□□□ 1.19
ATG4D-209ENST00000588857 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.48■■□□□ 1.19
ATG4D-209ENST00000588857 POLBP06746 335 aa22.48■■□□□ 1.19
ATG4D-209ENST00000588857 DLDP09622 509 aaKnown RBP22.48■■□□□ 1.19
ATG4D-209ENST00000588857 HLA-DPA1P20036 260 aa22.48■■□□□ 1.19
ATG4D-209ENST00000588857 CHRNA4P43681 627 aa22.48■■□□□ 1.19
ATG4D-209ENST00000588857 STAT4Q14765 748 aa22.48■■□□□ 1.19
ATG4D-209ENST00000588857 DLG2Q15700 870 aa22.48■■□□□ 1.19
ATG4D-209ENST00000588857 PREPLQ4J6C6 727 aaPredicted RBP22.48■■□□□ 1.19
ATG4D-209ENST00000588857 HSP90B2PQ58FF3 399 aa22.48■■□□□ 1.19
ATG4D-209ENST00000588857 SIRPB2Q5JXA9 342 aa22.48■■□□□ 1.19
ATG4D-209ENST00000588857 PCDH20Q8N6Y1 951 aaKnown RBP22.48■■□□□ 1.19
ATG4D-209ENST00000588857 OR2AP1Q8NGE2 309 aa22.48■■□□□ 1.19
ATG4D-209ENST00000588857 CYB5D2Q8WUJ1 264 aa22.48■■□□□ 1.19
ATG4D-209ENST00000588857 SORCS1Q8WY21 1168 aa22.48■■□□□ 1.19
ATG4D-209ENST00000588857 ELOVL2Q9NXB9 296 aa22.48■■□□□ 1.19
ATG4D-209ENST00000588857 RAI2Q9Y5P3 530 aa22.48■■□□□ 1.19
ATG4D-209ENST00000588857 C2CD4DB7Z1M9 353 aa22.47■■□□□ 1.19
ATG4D-209ENST00000588857 TIMM44O43615 452 aa22.47■■□□□ 1.19
ATG4D-209ENST00000588857 NDST3O95803 873 aa22.47■■□□□ 1.19
ATG4D-209ENST00000588857 GSRP00390 522 aa22.47■■□□□ 1.19
ATG4D-209ENST00000588857 FGF1P05230 155 aa22.47■■□□□ 1.19
ATG4D-209ENST00000588857 IVLP07476 585 aa22.47■■□□□ 1.19
ATG4D-209ENST00000588857 SRPRAP08240 638 aaKnown RBP22.47■■□□□ 1.19
ATG4D-209ENST00000588857 UNC5AQ6ZN44 842 aa22.47■■□□□ 1.19
ATG4D-209ENST00000588857 CROCCP2Q86T23 111 aa22.47■■□□□ 1.19
ATG4D-209ENST00000588857 PLCD3Q8N3E9 789 aa22.47■■□□□ 1.19
ATG4D-209ENST00000588857 CSGALNACT1Q8TDX6 532 aa22.47■■□□□ 1.19
ATG4D-209ENST00000588857 FBF1Q8TES7 1133 aa22.47■■□□□ 1.19
ATG4D-209ENST00000588857 TDRD1Q9BXT4 1180 aaKnown RBP22.47■■□□□ 1.19
ATG4D-209ENST00000588857 PLA2G4CQ9UP65 541 aa22.47■■□□□ 1.19
ATG4D-209ENST00000588857 PCDHGC4Q9Y5F7 938 aa22.47■■□□□ 1.19
ATG4D-209ENST00000588857 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.46■■□□□ 1.19
ATG4D-209ENST00000588857 LOC730098B7Z3J9 87 aa22.46■■□□□ 1.19
ATG4D-209ENST00000588857 ARNTLO00327 626 aa22.46■■□□□ 1.19
ATG4D-209ENST00000588857 ZNF821O75541 412 aaPredicted RBP22.46■■□□□ 1.19
ATG4D-209ENST00000588857 STX2P32856 288 aa22.46■■□□□ 1.19
ATG4D-209ENST00000588857 OPRD1P41143 372 aa22.46■■□□□ 1.19
ATG4D-209ENST00000588857 EIF2DP41214 584 aaKnown RBP22.46■■□□□ 1.19
ATG4D-209ENST00000588857 ST8SIA6P61647 398 aa22.46■■□□□ 1.19
ATG4D-209ENST00000588857 POU6F1Q14863 301 aa22.46■■□□□ 1.19
ATG4D-209ENST00000588857 EIF4HQ15056 248 aaKnown RBP22.46■■□□□ 1.19
ATG4D-209ENST00000588857 KRT71Q3SY84 523 aa22.46■■□□□ 1.19
ATG4D-209ENST00000588857 PCID2Q5JVF3 399 aa22.46■■□□□ 1.19
ATG4D-209ENST00000588857 PPHLN1Q8NEY8 458 aaKnown RBP22.46■■□□□ 1.19
ATG4D-209ENST00000588857 OR6K2Q8NGY2 324 aa22.46■■□□□ 1.19
ATG4D-209ENST00000588857 GSDMBQ8TAX9 411 aa22.46■■□□□ 1.19
ATG4D-209ENST00000588857 NSMCE3Q96MG7 304 aa22.46■■□□□ 1.19
ATG4D-209ENST00000588857 ADGRE3Q9BY15 652 aa22.46■■□□□ 1.19
ATG4D-209ENST00000588857 EVLQ9UI08 416 aaPredicted RBP22.46■■□□□ 1.19
ATG4D-209ENST00000588857 CHKBQ9Y259 395 aa22.46■■□□□ 1.19
ATG4D-209ENST00000588857 EXOC1LA0A1B0GW35 172 aa22.46■■□□□ 1.19
ATG4D-209ENST00000588857 TBC1D3BA6NDS4 549 aa22.46■■□□□ 1.19
ATG4D-209ENST00000588857 BNIP3LO60238 219 aa22.46■■□□□ 1.19
ATG4D-209ENST00000588857 ATXN1LP0C7T5 689 aaKnown RBP22.46■■□□□ 1.19
ATG4D-209ENST00000588857 MYZAPP0CAP1 466 aa22.46■■□□□ 1.19
ATG4D-209ENST00000588857 RECQLP46063 649 aaPredicted RBP22.46■■□□□ 1.19
ATG4D-209ENST00000588857 VASPP50552 380 aaPredicted RBP22.46■■□□□ 1.19
ATG4D-209ENST00000588857 GALNT3Q14435 633 aa22.46■■□□□ 1.19
ATG4D-209ENST00000588857 CARD16Q5EG05 197 aa22.46■■□□□ 1.19
ATG4D-209ENST00000588857 TERB1Q8NA31 727 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms