RNA–Protein interactions for RNA: ENST00000588228.5

NFIX-210, Transcript of nuclear factor I X, humanhuman

TSL 2 BASIC

Gene NFIX, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-210ENST00000588228 NTHL1P78549 312 aa16.69■□□□□ 0.26
NFIX-210ENST00000588228 PDE1BQ01064 536 aa16.69■□□□□ 0.26
NFIX-210ENST00000588228 NSUN2Q08J23 767 aaKnown RBP eCLIP16.69■□□□□ 0.26
NFIX-210ENST00000588228 QPCTQ16769 361 aa16.69■□□□□ 0.26
NFIX-210ENST00000588228 UGP2Q16851 508 aa16.69■□□□□ 0.26
NFIX-210ENST00000588228 RETSATQ6NUM9 610 aa16.69■□□□□ 0.26
NFIX-210ENST00000588228 LINGO4Q6UY18 593 aa16.69■□□□□ 0.26
NFIX-210ENST00000588228 NDUFAF2Q8N183 169 aa16.69■□□□□ 0.26
NFIX-210ENST00000588228 ACDQ96AP0 544 aa16.69■□□□□ 0.26
NFIX-210ENST00000588228 EXOC2Q96KP1 924 aa16.69■□□□□ 0.26
NFIX-210ENST00000588228 MCMBPQ9BTE3 642 aa16.69■□□□□ 0.26
NFIX-210ENST00000588228 LMAN2LQ9H0V9 348 aa16.69■□□□□ 0.26
NFIX-210ENST00000588228 PCMTD2Q9NV79 361 aa16.69■□□□□ 0.26
NFIX-210ENST00000588228 SLC2A6Q9UGQ3 507 aa16.69■□□□□ 0.26
NFIX-210ENST00000588228 GRID1Q9ULK0 1009 aa16.69■□□□□ 0.26
NFIX-210ENST00000588228 DENND4CQ5VZ89 1909 aa16.68■□□□□ 0.26
NFIX-210ENST00000588228 MTCL1Q9Y4B5 1905 aaKnown RBP16.68■□□□□ 0.26
NFIX-210ENST00000588228 TPP1O14773 563 aa16.68■□□□□ 0.26
NFIX-210ENST00000588228 DHRS4L1P0CG22 281 aa16.68■□□□□ 0.26
NFIX-210ENST00000588228 TAC1P20366 129 aa16.68■□□□□ 0.26
NFIX-210ENST00000588228 FOXN2P32314 431 aa16.68■□□□□ 0.26
NFIX-210ENST00000588228 CRHR1P34998 444 aa16.68■□□□□ 0.26
NFIX-210ENST00000588228 LMAN2Q12907 356 aa16.68■□□□□ 0.26
NFIX-210ENST00000588228 THOC5Q13769 683 aaKnown RBP16.68■□□□□ 0.26
NFIX-210ENST00000588228 RALGPS1Q5JS13 557 aa16.68■□□□□ 0.26
NFIX-210ENST00000588228 ZNF697Q5TEC3 545 aa16.68■□□□□ 0.26
NFIX-210ENST00000588228 GKAP1Q5VSY0 366 aaPredicted RBP16.68■□□□□ 0.26
NFIX-210ENST00000588228 FOXR1Q6PIV2 292 aa16.68■□□□□ 0.26
NFIX-210ENST00000588228 CDHR3Q6ZTQ4 885 aa16.68■□□□□ 0.26
NFIX-210ENST00000588228 ADGRD2Q7Z7M1 963 aa16.68■□□□□ 0.26
NFIX-210ENST00000588228 RBM23Q86U06 439 aaKnown RBP16.68■□□□□ 0.26
NFIX-210ENST00000588228 RIN3Q8TB24 985 aa16.68■□□□□ 0.26
NFIX-210ENST00000588228 PEX13Q92968 403 aa16.68■□□□□ 0.26
NFIX-210ENST00000588228 FAM111AQ96PZ2 611 aa16.68■□□□□ 0.26
NFIX-210ENST00000588228 FAM167BQ9BTA0 163 aa16.68■□□□□ 0.26
NFIX-210ENST00000588228 TDRD1Q9BXT4 1180 aaKnown RBP16.68■□□□□ 0.26
NFIX-210ENST00000588228 VPS11Q9H270 941 aa16.68■□□□□ 0.26
NFIX-210ENST00000588228 PLK2Q9NYY3 685 aa16.68■□□□□ 0.26
NFIX-210ENST00000588228 LHX3Q9UBR4 397 aa16.68■□□□□ 0.26
NFIX-210ENST00000588228 PLLPQ9Y342 182 aa16.68■□□□□ 0.26
NFIX-210ENST00000588228 CXorf51AA0A1B0GTR3 108 aa16.67■□□□□ 0.26
NFIX-210ENST00000588228 GOLGA8TH3BQL2 631 aa16.67■□□□□ 0.26
NFIX-210ENST00000588228 HADHAP40939 763 aa16.67■□□□□ 0.26
NFIX-210ENST00000588228 MAGEA12P43365 314 aa16.67■□□□□ 0.26
NFIX-210ENST00000588228 SERPINB8P50452 374 aa16.67■□□□□ 0.26
NFIX-210ENST00000588228 PLK1P53350 603 aa16.67■□□□□ 0.26
NFIX-210ENST00000588228 USP4Q13107 963 aa16.67■□□□□ 0.26
NFIX-210ENST00000588228 SLC12A1Q13621 1099 aa16.67■□□□□ 0.26
NFIX-210ENST00000588228 GALNT3Q14435 633 aa16.67■□□□□ 0.26
NFIX-210ENST00000588228 ZNF77Q15935 545 aa16.67■□□□□ 0.26
NFIX-210ENST00000588228 FSTL4Q6MZW2 842 aa16.67■□□□□ 0.26
NFIX-210ENST00000588228 APCDD1Q8J025 514 aa16.67■□□□□ 0.26
NFIX-210ENST00000588228 DCLK2Q8N568 766 aa16.67■□□□□ 0.26
NFIX-210ENST00000588228 GABPB2Q8TAK5 448 aaPredicted RBP16.67■□□□□ 0.26
NFIX-210ENST00000588228 NSMCE3Q96MG7 304 aa16.67■□□□□ 0.26
NFIX-210ENST00000588228 SLC13A1Q9BZW2 595 aa16.67■□□□□ 0.26
NFIX-210ENST00000588228 TLE6Q9H808 572 aa16.67■□□□□ 0.26
NFIX-210ENST00000588228 TBC1D14Q9P2M4 693 aa16.67■□□□□ 0.26
NFIX-210ENST00000588228 EBAG9O00559 213 aa16.66■□□□□ 0.26
NFIX-210ENST00000588228 LDB2O43679 373 aa16.66■□□□□ 0.26
NFIX-210ENST00000588228 PAPLNO95428 1278 aa16.66■□□□□ 0.26
NFIX-210ENST00000588228 PRAMEF12O95522 483 aa16.66■□□□□ 0.26
NFIX-210ENST00000588228 PBX2P40425 430 aa16.66■□□□□ 0.26
NFIX-210ENST00000588228 RHOAP61586 193 aa16.66■□□□□ 0.26
NFIX-210ENST00000588228 DUSP6Q16828 381 aa16.66■□□□□ 0.26
NFIX-210ENST00000588228 PLEKHG6Q3KR16 790 aa16.66■□□□□ 0.26
NFIX-210ENST00000588228 NCEH1Q6PIU2 408 aa16.66■□□□□ 0.26
NFIX-210ENST00000588228 METTL3Q86U44 580 aaKnown RBP16.66■□□□□ 0.26
NFIX-210ENST00000588228 OR13J1Q8NGT2 312 aa16.66■□□□□ 0.26
NFIX-210ENST00000588228 CALML6Q8TD86 181 aa16.66■□□□□ 0.26
NFIX-210ENST00000588228 BRSK1Q8TDC3 778 aa16.66■□□□□ 0.26
NFIX-210ENST00000588228 LRRC8CQ8TDW0 803 aa16.66■□□□□ 0.26
NFIX-210ENST00000588228 PTPRN2Q92932 1015 aa16.66■□□□□ 0.26
NFIX-210ENST00000588228 ATP2A3Q93084 1043 aa16.66■□□□□ 0.26
NFIX-210ENST00000588228 C12orf65Q9H3J6 166 aaKnown RBP16.66■□□□□ 0.26
NFIX-210ENST00000588228 RHOJQ9H4E5 214 aa16.66■□□□□ 0.26
NFIX-210ENST00000588228 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.66■□□□□ 0.26
NFIX-210ENST00000588228 RIMKLBQ9ULI2 386 aa16.66■□□□□ 0.26
NFIX-210ENST00000588228 CLEC4EQ9ULY5 219 aa16.66■□□□□ 0.26
NFIX-210ENST00000588228 CHKBQ9Y259 395 aa16.66■□□□□ 0.26
NFIX-210ENST00000588228 MRPS23Q9Y3D9 190 aaKnown RBP16.66■□□□□ 0.26
NFIX-210ENST00000588228 RAI2Q9Y5P3 530 aa16.66■□□□□ 0.26
NFIX-210ENST00000588228 SLC7A4O43246 635 aa16.65■□□□□ 0.26
NFIX-210ENST00000588228 GLRA3O75311 464 aa16.65■□□□□ 0.26
NFIX-210ENST00000588228 PENKP01210 267 aaPredicted RBP16.65■□□□□ 0.26
NFIX-210ENST00000588228 CEBPBP17676 345 aa16.65■□□□□ 0.26
NFIX-210ENST00000588228 TYK2P29597 1187 aa16.65■□□□□ 0.26
NFIX-210ENST00000588228 ACVR1Q04771 509 aa16.65■□□□□ 0.26
NFIX-210ENST00000588228 PDE1CQ14123 709 aaPredicted RBP16.65■□□□□ 0.26
NFIX-210ENST00000588228 NEPROQ6NW34 567 aa16.65■□□□□ 0.26
NFIX-210ENST00000588228 KIAA0408Q6ZU52 694 aa16.65■□□□□ 0.26
NFIX-210ENST00000588228 PIGWQ7Z7B1 504 aa16.65■□□□□ 0.26
NFIX-210ENST00000588228 ZC3HC1Q86WB0 502 aaKnown RBP16.65■□□□□ 0.26
NFIX-210ENST00000588228 RNF135Q8IUD6 432 aa16.65■□□□□ 0.26
NFIX-210ENST00000588228 ZNF557Q8N988 423 aaPredicted RBP16.65■□□□□ 0.26
NFIX-210ENST00000588228 C2CD4AQ8NCU7 369 aaPredicted RBP16.65■□□□□ 0.26
NFIX-210ENST00000588228 BLOC1S5Q8TDH9 187 aa16.65■□□□□ 0.26
NFIX-210ENST00000588228 SPOCK2Q92563 424 aa16.65■□□□□ 0.26
NFIX-210ENST00000588228 OTUB2Q96DC9 234 aa16.65■□□□□ 0.26
NFIX-210ENST00000588228 VPS39Q96JC1 886 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms