RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 IGFALSP35858 605 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 ETFBP38117 255 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 EIF4A3P38919 411 aaKnown RBP6.5□□□□□ -1.37
SDF2-205ENST00000587629 TMPRSS3P57727 454 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 PFN3P60673 137 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 POLR2FP61218 127 aaKnown RBP6.5□□□□□ -1.37
SDF2-205ENST00000587629 SNRPD1P62314 119 aaKnown RBP6.5□□□□□ -1.37
SDF2-205ENST00000587629 CDR2Q01850 454 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 KLHL40Q2TBA0 621 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 TCP11X2Q5H9J9 407 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 ACBD5Q5T8D3 534 aaPredicted RBP6.5□□□□□ -1.37
SDF2-205ENST00000587629 MANEALQ5VSG8 457 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 SCYL2Q6P3W7 929 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 RBM44Q6ZP01 1051 aaKnown RBP6.5□□□□□ -1.37
SDF2-205ENST00000587629 NLRP14Q86W24 1093 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 HID1Q8IV36 788 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 SLC35F3Q8IY50 421 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 PHACTR4Q8IZ21 702 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 OR2AP1Q8NGE2 309 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 FAM174AQ8TBP5 190 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 EPS8L1Q8TE68 723 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 CXorf40AQ8TE69 158 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 FAM172AQ8WUF8 416 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 BTN2A2Q8WVV5 523 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 TSACCQ96A04 125 aaPredicted RBP6.5□□□□□ -1.37
SDF2-205ENST00000587629 RAB7BQ96AH8 199 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 VOPP1Q96AW1 172 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 ISG20Q96AZ6 181 aaKnown RBP6.5□□□□□ -1.37
SDF2-205ENST00000587629 CENPTQ96BT3 561 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 TBC1D31Q96DN5 1066 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 EXOC2Q96KP1 924 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 SLC46A1Q96NT5 459 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 LENG8Q96PV6 779 aaPredicted RBP6.5□□□□□ -1.37
SDF2-205ENST00000587629 PCDHB18PQ96TA0 734 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 EPAS1Q99814 870 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 LRRC61Q9BV99 259 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 SLC13A1Q9BZW2 595 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 CLPBQ9H078 707 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 MAGEH1Q9H213 219 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 VPS16Q9H269 839 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 CLSTN2Q9H4D0 955 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 USP29Q9HBJ7 922 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 ASCL3Q9NQ33 180 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 THSD1Q9NS62 852 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 GPR27Q9NS67 375 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 FAM207AQ9NSI2 230 aaPredicted RBP6.5□□□□□ -1.37
SDF2-205ENST00000587629 TMEM248Q9NWD8 314 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 SPASTQ9UBP0 616 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 APOBEC3BQ9UH17 382 aaKnown RBP6.5□□□□□ -1.37
SDF2-205ENST00000587629 NOCTQ9UK39 431 aaKnown RBP6.5□□□□□ -1.37
SDF2-205ENST00000587629 ENTPD2Q9Y5L3 495 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 CSNK1G3Q9Y6M4 447 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 MGAQ8IWI9 3026 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 SETXQ7Z333 2677 aaKnown RBP6.49□□□□□ -1.37
SDF2-205ENST00000587629 TRPM6Q9BX84 2022 aa6.49□□□□□ -1.37
SDF2-205ENST00000587629 EME2A4GXA9 379 aaPredicted RBP6.49□□□□□ -1.37
SDF2-205ENST00000587629 C2CD4BA6NLJ0 364 aa6.49□□□□□ -1.37
SDF2-205ENST00000587629 ERVH48-1M5A8F1 160 aa6.49□□□□□ -1.37
SDF2-205ENST00000587629 AREL1O15033 823 aa6.49□□□□□ -1.37
SDF2-205ENST00000587629 EPHB6O15197 1021 aa6.49□□□□□ -1.37
SDF2-205ENST00000587629 KDELR3O43731 214 aa6.49□□□□□ -1.37
SDF2-205ENST00000587629 CREB3O43889 395 aa6.49□□□□□ -1.37
SDF2-205ENST00000587629 TM7SF2O76062 418 aa6.49□□□□□ -1.37
SDF2-205ENST00000587629 DXOO77932 396 aaKnown RBP6.49□□□□□ -1.37
SDF2-205ENST00000587629 TNFSF15O95150 251 aa6.49□□□□□ -1.37
SDF2-205ENST00000587629 PIGNO95427 931 aa6.49□□□□□ -1.37
SDF2-205ENST00000587629 GSRP00390 522 aa6.49□□□□□ -1.37
SDF2-205ENST00000587629 CYP1A1P04798 512 aaPredicted RBP6.49□□□□□ -1.37
SDF2-205ENST00000587629 PRKCGP05129 697 aa6.49□□□□□ -1.37
SDF2-205ENST00000587629 KRT3P12035 628 aa6.49□□□□□ -1.37
SDF2-205ENST00000587629 TIMP2P16035 220 aa6.49□□□□□ -1.37
SDF2-205ENST00000587629 MMP8P22894 467 aa6.49□□□□□ -1.37
SDF2-205ENST00000587629 XPAP23025 273 aaPredicted RBP6.49□□□□□ -1.37
SDF2-205ENST00000587629 ERCC5P28715 1186 aaPredicted RBP6.49□□□□□ -1.37
SDF2-205ENST00000587629 EPHB2P29323 1055 aa6.49□□□□□ -1.37
SDF2-205ENST00000587629 MAPKAPK2P49137 400 aa6.49□□□□□ -1.37
SDF2-205ENST00000587629 RPIAP49247 311 aa6.49□□□□□ -1.37
SDF2-205ENST00000587629 HDAC4P56524 1084 aa6.49□□□□□ -1.37
SDF2-205ENST00000587629 GEMIN4P57678 1058 aaKnown RBP6.49□□□□□ -1.37
SDF2-205ENST00000587629 ERVPABLB-1P60509 514 aa6.49□□□□□ -1.37
SDF2-205ENST00000587629 RHOAP61586 193 aa6.49□□□□□ -1.37
SDF2-205ENST00000587629 FMO1Q01740 532 aa6.49□□□□□ -1.37
SDF2-205ENST00000587629 PPARDQ03181 441 aa6.49□□□□□ -1.37
SDF2-205ENST00000587629 PTK2BQ14289 1009 aa6.49□□□□□ -1.37
SDF2-205ENST00000587629 IRF4Q15306 451 aa6.49□□□□□ -1.37
SDF2-205ENST00000587629 ZSCAN23Q3MJ62 389 aa6.49□□□□□ -1.37
SDF2-205ENST00000587629 KIAA1614Q5VZ46 1190 aa6.49□□□□□ -1.37
SDF2-205ENST00000587629 THSD4Q6ZMP0 1018 aa6.49□□□□□ -1.37
SDF2-205ENST00000587629 SLFN11Q7Z7L1 901 aa6.49□□□□□ -1.37
SDF2-205ENST00000587629 Q8N9G6 341 aaPredicted RBP6.49□□□□□ -1.37
SDF2-205ENST00000587629 GLMNQ92990 594 aa6.49□□□□□ -1.37
SDF2-205ENST00000587629 ARHGEF26Q96DR7 871 aa6.49□□□□□ -1.37
SDF2-205ENST00000587629 HMCESQ96FZ2 354 aa6.49□□□□□ -1.37
SDF2-205ENST00000587629 PRR11Q96HE9 360 aaPredicted RBP6.49□□□□□ -1.37
SDF2-205ENST00000587629 PCMTD1Q96MG8 357 aaPredicted RBP6.49□□□□□ -1.37
SDF2-205ENST00000587629 GDAP1L1Q96MZ0 367 aa6.49□□□□□ -1.37
SDF2-205ENST00000587629 NCAPGQ9BPX3 1015 aa6.49□□□□□ -1.37
SDF2-205ENST00000587629 CCDC3Q9BQI4 270 aa6.49□□□□□ -1.37
SDF2-205ENST00000587629 BOCQ9BWV1 1114 aa6.49□□□□□ -1.37
SDF2-205ENST00000587629 OSBPL1AQ9BXW6 950 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms