RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 MIA3Q5JRA6 1907 aa20.67■□□□□ 0.9
ATG4D-204ENST00000586417 TRIOO75962 3097 aa20.67■□□□□ 0.9
ATG4D-204ENST00000586417 HMX2A2RU54 273 aa20.67■□□□□ 0.9
ATG4D-204ENST00000586417 SMAD2Q15796 467 aaKnown RBP20.67■□□□□ 0.9
ATG4D-204ENST00000586417 PCID2Q5JVF3 399 aa20.67■□□□□ 0.9
ATG4D-204ENST00000586417 TRIM68Q6AZZ1 485 aa20.67■□□□□ 0.9
ATG4D-204ENST00000586417 PTCRAQ6ISU1 281 aaPredicted RBP20.67■□□□□ 0.9
ATG4D-204ENST00000586417 TPGS1Q6ZTW0 290 aa20.67■□□□□ 0.9
ATG4D-204ENST00000586417 KDELC2Q7Z4H8 507 aa20.67■□□□□ 0.9
ATG4D-204ENST00000586417 WFDC5Q8TCV5 224 aa20.67■□□□□ 0.9
ATG4D-204ENST00000586417 MGARPQ8TDB4 240 aa20.67■□□□□ 0.9
ATG4D-204ENST00000586417 CDKL2Q92772 493 aa20.67■□□□□ 0.9
ATG4D-204ENST00000586417 ZNF778Q96MU6 729 aa20.67■□□□□ 0.9
ATG4D-204ENST00000586417 PSKH2Q96QS6 385 aa20.67■□□□□ 0.9
ATG4D-204ENST00000586417 SEMA3CQ99985 751 aa20.67■□□□□ 0.9
ATG4D-204ENST00000586417 EPS15L1Q9UBC2 864 aa20.67■□□□□ 0.9
ATG4D-204ENST00000586417 SEPT3Q9UH03 358 aa20.67■□□□□ 0.9
ATG4D-204ENST00000586417 TRIM49D1C9J1S8 452 aa20.66■□□□□ 0.9
ATG4D-204ENST00000586417 H0Y626 953 aa20.66■□□□□ 0.9
ATG4D-204ENST00000586417 SNRPAP09012 282 aaKnown RBP20.66■□□□□ 0.9
ATG4D-204ENST00000586417 ERVK-10P10266 1014 aa20.66■□□□□ 0.9
ATG4D-204ENST00000586417 NMBRP28336 390 aa20.66■□□□□ 0.9
ATG4D-204ENST00000586417 MZF1P28698 734 aaPredicted RBP20.66■□□□□ 0.9
ATG4D-204ENST00000586417 ARF5P84085 180 aa20.66■□□□□ 0.9
ATG4D-204ENST00000586417 RFTN1Q14699 578 aaPredicted RBP20.66■□□□□ 0.9
ATG4D-204ENST00000586417 LRRC14Q15048 493 aa20.66■□□□□ 0.9
ATG4D-204ENST00000586417 RNF43Q68DV7 783 aa20.66■□□□□ 0.9
ATG4D-204ENST00000586417 PKN3Q6P5Z2 889 aa20.66■□□□□ 0.9
ATG4D-204ENST00000586417 ADGRG2Q8IZP9 1017 aa20.66■□□□□ 0.9
ATG4D-204ENST00000586417 TDRD5Q8NAT2 981 aaKnown RBP20.66■□□□□ 0.9
ATG4D-204ENST00000586417 ALG14Q96F25 216 aa20.66■□□□□ 0.9
ATG4D-204ENST00000586417 MUC3BQ9H195 1237 aa20.66■□□□□ 0.9
ATG4D-204ENST00000586417 RABEP2Q9H5N1 569 aa20.66■□□□□ 0.9
ATG4D-204ENST00000586417 KIF26AQ9ULI4 1882 aaPredicted RBP20.66■□□□□ 0.9
ATG4D-204ENST00000586417 TYW5A2RUC4 315 aaKnown RBP20.65■□□□□ 0.9
ATG4D-204ENST00000586417 CBX4O00257 560 aa20.65■□□□□ 0.9
ATG4D-204ENST00000586417 ZMPSTE24O75844 475 aa20.65■□□□□ 0.9
ATG4D-204ENST00000586417 KRT37O76014 449 aa20.65■□□□□ 0.9
ATG4D-204ENST00000586417 CD160O95971 181 aa20.65■□□□□ 0.9
ATG4D-204ENST00000586417 MT-ND3P03897 115 aa20.65■□□□□ 0.9
ATG4D-204ENST00000586417 SERPINB9P50453 376 aa20.65■□□□□ 0.9
ATG4D-204ENST00000586417 MSLNQ13421 630 aaPredicted RBP20.65■□□□□ 0.9
ATG4D-204ENST00000586417 GRM2Q14416 872 aa20.65■□□□□ 0.9
ATG4D-204ENST00000586417 POU6F1Q14863 301 aa20.65■□□□□ 0.9
ATG4D-204ENST00000586417 RASSF3Q86WH2 238 aa20.65■□□□□ 0.9
ATG4D-204ENST00000586417 TMEM25Q86YD3 366 aa20.65■□□□□ 0.9
ATG4D-204ENST00000586417 BANPQ8N9N5 519 aa20.65■□□□□ 0.9
ATG4D-204ENST00000586417 KLF6Q99612 283 aaPredicted RBP20.65■□□□□ 0.9
ATG4D-204ENST00000586417 PHF7Q9BWX1 381 aaPredicted RBP20.65■□□□□ 0.9
ATG4D-204ENST00000586417 MLXIPLQ9NP71 852 aa20.65■□□□□ 0.9
ATG4D-204ENST00000586417 DUS2Q9NX74 493 aaKnown RBP20.65■□□□□ 0.9
ATG4D-204ENST00000586417 OBP2AQ9NY56 170 aa20.65■□□□□ 0.9
ATG4D-204ENST00000586417 TCAF1Q9Y4C2 921 aa20.65■□□□□ 0.9
ATG4D-204ENST00000586417 PSAT1Q9Y617 370 aa20.65■□□□□ 0.9
ATG4D-204ENST00000586417 NUMBLQ9Y6R0 609 aa20.65■□□□□ 0.9
ATG4D-204ENST00000586417 MYO10Q9HD67 2058 aa20.65■□□□□ 0.9
ATG4D-204ENST00000586417 LOC285095A0A1B0GVY8 99 aa20.64■□□□□ 0.9
ATG4D-204ENST00000586417 IL9P15248 144 aa20.64■□□□□ 0.9
ATG4D-204ENST00000586417 RGRP47804 291 aa20.64■□□□□ 0.9
ATG4D-204ENST00000586417 WDR4P57081 412 aaKnown RBP20.64■□□□□ 0.9
ATG4D-204ENST00000586417 SLC18A2Q05940 514 aa20.64■□□□□ 0.9
ATG4D-204ENST00000586417 BMPR2Q13873 1038 aa20.64■□□□□ 0.9
ATG4D-204ENST00000586417 CYTH1Q15438 398 aa20.64■□□□□ 0.9
ATG4D-204ENST00000586417 SMAD1Q15797 465 aaKnown RBP20.64■□□□□ 0.9
ATG4D-204ENST00000586417 PACS1Q6VY07 963 aa20.64■□□□□ 0.9
ATG4D-204ENST00000586417 ZNF771Q7L3S4 317 aaPredicted RBP20.64■□□□□ 0.9
ATG4D-204ENST00000586417 MFSD6LQ8IWD5 586 aa20.64■□□□□ 0.9
ATG4D-204ENST00000586417 BBS5Q8N3I7 341 aa20.64■□□□□ 0.9
ATG4D-204ENST00000586417 PTCD2Q8WV60 388 aaKnown RBP20.64■□□□□ 0.9
ATG4D-204ENST00000586417 OSCP1Q8WVF1 389 aa20.64■□□□□ 0.9
ATG4D-204ENST00000586417 ELSPBP1Q96BH3 223 aa20.64■□□□□ 0.9
ATG4D-204ENST00000586417 SGSM3Q96HU1 749 aa20.64■□□□□ 0.9
ATG4D-204ENST00000586417 FEM1AQ9BSK4 669 aa20.64■□□□□ 0.9
ATG4D-204ENST00000586417 CINPQ9BW66 212 aaPredicted RBP20.64■□□□□ 0.9
ATG4D-204ENST00000586417 MRM3Q9HC36 420 aaKnown RBP20.64■□□□□ 0.9
ATG4D-204ENST00000586417 NKIRAS1Q9NYS0 192 aa20.64■□□□□ 0.9
ATG4D-204ENST00000586417 PLK2Q9NYY3 685 aa20.64■□□□□ 0.9
ATG4D-204ENST00000586417 TBC1D14Q9P2M4 693 aa20.64■□□□□ 0.9
ATG4D-204ENST00000586417 GMNCA6NCL1 334 aa20.64■□□□□ 0.89
ATG4D-204ENST00000586417 GOLGA8RI6L899 631 aa20.64■□□□□ 0.89
ATG4D-204ENST00000586417 SNAP91O60641 907 aa20.64■□□□□ 0.89
ATG4D-204ENST00000586417 KRT38O76015 456 aa20.64■□□□□ 0.89
ATG4D-204ENST00000586417 ATXN1LP0C7T5 689 aaKnown RBP20.64■□□□□ 0.89
ATG4D-204ENST00000586417 CR2P20023 1033 aa20.64■□□□□ 0.89
ATG4D-204ENST00000586417 RPA3P35244 121 aaPredicted RBP20.64■□□□□ 0.89
ATG4D-204ENST00000586417 HTR4Q13639 388 aa20.64■□□□□ 0.89
ATG4D-204ENST00000586417 SLC1A5Q15758 541 aa20.64■□□□□ 0.89
ATG4D-204ENST00000586417 EML3Q32P44 896 aa20.64■□□□□ 0.89
ATG4D-204ENST00000586417 MPP7Q5T2T1 576 aa20.64■□□□□ 0.89
ATG4D-204ENST00000586417 LGSNQ5TDP6 509 aa20.64■□□□□ 0.89
ATG4D-204ENST00000586417 SLC25A41Q8N5S1 370 aa20.64■□□□□ 0.89
ATG4D-204ENST00000586417 BCAS4Q8TDM0 211 aa20.64■□□□□ 0.89
ATG4D-204ENST00000586417 ALKBH8Q96BT7 664 aaKnown RBP20.64■□□□□ 0.89
ATG4D-204ENST00000586417 MTBPQ96DY7 904 aa20.64■□□□□ 0.89
ATG4D-204ENST00000586417 NSMCE3Q96MG7 304 aa20.64■□□□□ 0.89
ATG4D-204ENST00000586417 ZNF317Q96PQ6 595 aaPredicted RBP20.64■□□□□ 0.89
ATG4D-204ENST00000586417 ZFATQ9P243 1243 aa20.64■□□□□ 0.89
ATG4D-204ENST00000586417 PRKAG3Q9UGI9 489 aa20.64■□□□□ 0.89
ATG4D-204ENST00000586417 ANHXE9PGG2 379 aa20.63■□□□□ 0.89
ATG4D-204ENST00000586417 RFPL1O75677 317 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms