RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 NOVA2Q9UNW9 492 aaKnown RBP6.26□□□□□ -1.41
LIG3-206ENST00000586058 PLXNA2O75051 1894 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 MYO9BQ13459 2157 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 LRRK1Q38SD2 2015 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 EPOPA6NHQ4 379 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 C2orf81A6NN90 581 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 HEPACAM2A8MVW5 462 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 RFXAPO00287 272 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 TP73O15350 636 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 HOXC11O43248 304 aaPredicted RBP6.25□□□□□ -1.41
LIG3-206ENST00000586058 BNIP3LO60238 219 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 CACNG3O60359 315 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 GREM1O60565 184 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 SOCS5O75159 536 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 AVILO75366 819 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 MOSPD3O75425 235 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 PAPLNO95428 1278 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 NDST3O95803 873 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 GLP2RO95838 553 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 GSRP00390 522 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 SHBGP04278 402 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 CYP17A1P05093 508 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 SRPRAP08240 638 aaKnown RBP6.25□□□□□ -1.41
LIG3-206ENST00000586058 ALADP13716 330 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 PSMC3P17980 439 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 XPAP23025 273 aaPredicted RBP6.25□□□□□ -1.41
LIG3-206ENST00000586058 MZF1P28698 734 aaPredicted RBP6.25□□□□□ -1.41
LIG3-206ENST00000586058 PPARGP37231 505 aaPredicted RBP6.25□□□□□ -1.41
LIG3-206ENST00000586058 HADHAP40939 763 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 GRIA4P48058 902 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 SLC12A2P55011 1212 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 PPP2R2AP63151 447 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 ARF5P84085 180 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 ECT2LQ008S8 904 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 MLLT1Q03111 559 aaPredicted RBP6.25□□□□□ -1.41
LIG3-206ENST00000586058 NSUN2Q08J23 767 aaKnown RBP eCLIP6.25□□□□□ -1.41
LIG3-206ENST00000586058 MGAT5Q09328 741 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 CBLBQ13191 982 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 KCNC3Q14003 757 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 RASA2Q15283 850 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 DHCR24Q15392 516 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 SKIV2LQ15477 1246 aaKnown RBP6.25□□□□□ -1.41
LIG3-206ENST00000586058 SLC1A5Q15758 541 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 KBTBD12Q3ZCT8 623 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 MSS51Q4VC12 460 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 FAM78AQ5JUQ0 283 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 ARMC12Q5T9G4 340 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 C22orf39Q6P5X5 142 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 LINGO4Q6UY18 593 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 UNC5AQ6ZN44 842 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 ZNF534Q76KX8 674 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 MARK2Q7KZI7 788 aaKnown RBP6.25□□□□□ -1.41
LIG3-206ENST00000586058 KDELC2Q7Z4H8 507 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 CAND1Q86VP6 1230 aaKnown RBP6.25□□□□□ -1.41
LIG3-206ENST00000586058 TDRPQ86YL5 185 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 SLC25A41Q8N5S1 370 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 CNTD1Q8N815 330 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 PPM1NQ8N819 430 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 LPCAT1Q8NF37 534 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 OR2AP1Q8NGE2 309 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 BLOC1S5Q8TDH9 187 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 SREK1Q8WXA9 508 aaKnown RBP6.25□□□□□ -1.41
LIG3-206ENST00000586058 PEX13Q92968 403 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 WBP2Q969T9 261 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 ALKBH8Q96BT7 664 aaKnown RBP6.25□□□□□ -1.41
LIG3-206ENST00000586058 OXNAD1Q96HP4 312 aaPredicted RBP6.25□□□□□ -1.41
LIG3-206ENST00000586058 MRGPRX2Q96LB1 330 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 TUBGCP5Q96RT8 1024 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 RANBP9Q96S59 729 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 TTC1Q99614 292 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 TDRD1Q9BXT4 1180 aaKnown RBP6.25□□□□□ -1.41
LIG3-206ENST00000586058 TM6SF2Q9BZW4 377 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 TRPV4Q9HBA0 871 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 C20orf96Q9NUD7 363 aaPredicted RBP6.25□□□□□ -1.41
LIG3-206ENST00000586058 DEC1Q9P2X7 70 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 LGALS13Q9UHV8 139 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 CD207Q9UJ71 328 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 PLA2G4CQ9UP65 541 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 FAM50BQ9Y247 325 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 FCF1Q9Y324 198 aaKnown RBP6.25□□□□□ -1.41
LIG3-206ENST00000586058 PKP3Q9Y446 797 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 TCAF1Q9Y4C2 921 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 ACTL7BQ9Y614 415 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 TCF20Q9UGU0 1960 aaKnown RBP6.25□□□□□ -1.41
LIG3-206ENST00000586058 CKAP5Q14008 2032 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 PLXNB3Q9ULL4 1909 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 COL4A2P08572 1712 aa6.25□□□□□ -1.41
LIG3-206ENST00000586058 H3BQF6 201 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 AGPSO00116 658 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 LINC01565O15544 149 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 TIMM44O43615 452 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 SNAP91O60641 907 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 ECI2O75521 394 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 SYF2O95926 243 aaKnown RBP6.24□□□□□ -1.41
LIG3-206ENST00000586058 PEX11BO96011 259 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 EPOP01588 193 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 SLC4A1P02730 911 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 MT-ND3P03897 115 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 APODP05090 189 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 SNRPAP09012 282 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms