RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 ALG1LQ6GMV1 187 aa12.81□□□□□ -0.36
VMP1-202ENST00000585847 PID1Q7Z2X4 250 aa12.81□□□□□ -0.36
VMP1-202ENST00000585847 ZNF567Q8N184 647 aa12.81□□□□□ -0.36
VMP1-202ENST00000585847 IL17RCQ8NAC3 791 aa12.81□□□□□ -0.36
VMP1-202ENST00000585847 ATP11CQ8NB49 1132 aa12.81□□□□□ -0.36
VMP1-202ENST00000585847 DTWD2Q8NBA8 298 aa12.81□□□□□ -0.36
VMP1-202ENST00000585847 CCDC110Q8TBZ0 833 aa12.81□□□□□ -0.36
VMP1-202ENST00000585847 LRRN4Q8WUT4 740 aa12.81□□□□□ -0.36
VMP1-202ENST00000585847 PTCD2Q8WV60 388 aaKnown RBP12.81□□□□□ -0.36
VMP1-202ENST00000585847 VOPP1Q96AW1 172 aa12.81□□□□□ -0.36
VMP1-202ENST00000585847 RPL10LQ96L21 214 aaKnown RBP12.81□□□□□ -0.36
VMP1-202ENST00000585847 SPON2Q9BUD6 331 aa12.81□□□□□ -0.36
VMP1-202ENST00000585847 TMEM109Q9BVC6 243 aa12.81□□□□□ -0.36
VMP1-202ENST00000585847 ROPN1BQ9BZX4 212 aaPredicted RBP12.81□□□□□ -0.36
VMP1-202ENST00000585847 CIPCQ9C0C6 399 aa12.81□□□□□ -0.36
VMP1-202ENST00000585847 POLR1EQ9GZS1 481 aaKnown RBP12.81□□□□□ -0.36
VMP1-202ENST00000585847 MUC3BQ9H195 1237 aa12.81□□□□□ -0.36
VMP1-202ENST00000585847 CHRDQ9H2X0 955 aa12.81□□□□□ -0.36
VMP1-202ENST00000585847 TMEM245Q9H330 911 aa12.81□□□□□ -0.36
VMP1-202ENST00000585847 ROPN1Q9HAT0 212 aaPredicted RBP12.81□□□□□ -0.36
VMP1-202ENST00000585847 SEPT3Q9UH03 358 aa12.81□□□□□ -0.36
VMP1-202ENST00000585847 SLCO3A1Q9UIG8 710 aa12.81□□□□□ -0.36
VMP1-202ENST00000585847 VPS28Q9UK41 221 aa12.81□□□□□ -0.36
VMP1-202ENST00000585847 ERVW-1Q9UQF0 538 aa12.81□□□□□ -0.36
VMP1-202ENST00000585847 SIT1Q9Y3P8 196 aa12.81□□□□□ -0.36
VMP1-202ENST00000585847 FAM186AA6NE01 2351 aa12.8□□□□□ -0.36
VMP1-202ENST00000585847 MAGEB16A2A368 324 aa12.8□□□□□ -0.36
VMP1-202ENST00000585847 CHURC1-FNTBB4DL54 471 aa12.8□□□□□ -0.36
VMP1-202ENST00000585847 K7ERQ8 282 aa12.8□□□□□ -0.36
VMP1-202ENST00000585847 SMAD6O43541 496 aaKnown RBP12.8□□□□□ -0.36
VMP1-202ENST00000585847 TIMM44O43615 452 aa12.8□□□□□ -0.36
VMP1-202ENST00000585847 ZNF821O75541 412 aaPredicted RBP12.8□□□□□ -0.36
VMP1-202ENST00000585847 TCEA3O75764 348 aa12.8□□□□□ -0.36
VMP1-202ENST00000585847 TTC4O95801 387 aa12.8□□□□□ -0.36
VMP1-202ENST00000585847 ASLP04424 464 aa12.8□□□□□ -0.36
VMP1-202ENST00000585847 ZSCAN5DPP0CG00 497 aa12.8□□□□□ -0.36
VMP1-202ENST00000585847 CA4P22748 312 aa12.8□□□□□ -0.36
VMP1-202ENST00000585847 PRKCHP24723 683 aa12.8□□□□□ -0.36
VMP1-202ENST00000585847 MAGEA3P43357 314 aa12.8□□□□□ -0.36
VMP1-202ENST00000585847 RPS9P46781 194 aaKnown RBP12.8□□□□□ -0.36
VMP1-202ENST00000585847 MRPS21P82921 87 aaKnown RBP12.8□□□□□ -0.36
VMP1-202ENST00000585847 ECT2LQ008S8 904 aa12.8□□□□□ -0.36
VMP1-202ENST00000585847 SULT2A1Q06520 285 aa12.8□□□□□ -0.36
VMP1-202ENST00000585847 MPP3Q13368 585 aa12.8□□□□□ -0.36
VMP1-202ENST00000585847 FRG1Q14331 258 aaKnown RBP12.8□□□□□ -0.36
VMP1-202ENST00000585847 RASA2Q15283 850 aa12.8□□□□□ -0.36
VMP1-202ENST00000585847 C2orf27AQ580R0 203 aa12.8□□□□□ -0.36
VMP1-202ENST00000585847 FAM182AQ5T1J6 154 aa12.8□□□□□ -0.36
VMP1-202ENST00000585847 RETSATQ6NUM9 610 aa12.8□□□□□ -0.36
VMP1-202ENST00000585847 LRRC8BQ6P9F7 803 aa12.8□□□□□ -0.36
VMP1-202ENST00000585847 LINGO4Q6UY18 593 aa12.8□□□□□ -0.36
VMP1-202ENST00000585847 LEKR1Q6ZMV7 388 aa12.8□□□□□ -0.36
VMP1-202ENST00000585847 IQCKQ8N0W5 287 aa12.8□□□□□ -0.36
VMP1-202ENST00000585847 SYNPOQ8N3V7 929 aa12.8□□□□□ -0.36
VMP1-202ENST00000585847 RIBC1Q8N443 379 aaPredicted RBP12.8□□□□□ -0.36
VMP1-202ENST00000585847 ZNF513Q8N8E2 541 aaPredicted RBP12.8□□□□□ -0.36
VMP1-202ENST00000585847 GLIS1Q8NBF1 620 aa12.8□□□□□ -0.36
VMP1-202ENST00000585847 RPLP0P6Q8NHW5 317 aa12.8□□□□□ -0.36
VMP1-202ENST00000585847 FRS2Q8WU20 508 aa12.8□□□□□ -0.36
VMP1-202ENST00000585847 ZNF419Q96HQ0 510 aaPredicted RBP12.8□□□□□ -0.36
VMP1-202ENST00000585847 PSKH2Q96QS6 385 aa12.8□□□□□ -0.36
VMP1-202ENST00000585847 SLC25A51Q9H1U9 297 aa12.8□□□□□ -0.36
VMP1-202ENST00000585847 NEUROG2Q9H2A3 272 aa12.8□□□□□ -0.36
VMP1-202ENST00000585847 MTG2Q9H4K7 406 aa12.8□□□□□ -0.36
VMP1-202ENST00000585847 ETNK1Q9HBU6 452 aa12.8□□□□□ -0.36
VMP1-202ENST00000585847 ATP13A1Q9HD20 1204 aa12.8□□□□□ -0.36
VMP1-202ENST00000585847 ZNF446Q9NWS9 450 aa12.8□□□□□ -0.36
VMP1-202ENST00000585847 CACNA2D2Q9NY47 1150 aa12.8□□□□□ -0.36
VMP1-202ENST00000585847 HS3ST2Q9Y278 367 aa12.8□□□□□ -0.36
VMP1-202ENST00000585847 ATP8A1Q9Y2Q0 1164 aa12.8□□□□□ -0.36
VMP1-202ENST00000585847 WDR87Q6ZQQ6 2873 aa12.8□□□□□ -0.36
VMP1-202ENST00000585847 DMDP11532 3685 aa12.8□□□□□ -0.36
VMP1-202ENST00000585847 CACNA1IQ9P0X4 2223 aa12.79□□□□□ -0.36
VMP1-202ENST00000585847 A0A1W2PQF6 199 aa12.79□□□□□ -0.36
VMP1-202ENST00000585847 KCNK1O00180 336 aa12.79□□□□□ -0.36
VMP1-202ENST00000585847 CBX4O00257 560 aa12.79□□□□□ -0.36
VMP1-202ENST00000585847 ATP9BO43861 1147 aa12.79□□□□□ -0.36
VMP1-202ENST00000585847 EPOP01588 193 aa12.79□□□□□ -0.36
VMP1-202ENST00000585847 SRPRAP08240 638 aaKnown RBP12.79□□□□□ -0.36
VMP1-202ENST00000585847 SRCP12931 536 aa12.79□□□□□ -0.36
VMP1-202ENST00000585847 HLA-EP13747 358 aa12.79□□□□□ -0.36
VMP1-202ENST00000585847 ATP5DP30049 168 aa12.79□□□□□ -0.36
VMP1-202ENST00000585847 HSD17B3P37058 310 aa12.79□□□□□ -0.36
VMP1-202ENST00000585847 WASP42768 502 aa12.79□□□□□ -0.36
VMP1-202ENST00000585847 MMP13P45452 471 aa12.79□□□□□ -0.36
VMP1-202ENST00000585847 IFFO1Q0D2I5 559 aa12.79□□□□□ -0.36
VMP1-202ENST00000585847 LRRC32Q14392 662 aa12.79□□□□□ -0.36
VMP1-202ENST00000585847 ZNF235Q14590 738 aa12.79□□□□□ -0.36
VMP1-202ENST00000585847 STAT4Q14765 748 aa12.79□□□□□ -0.36
VMP1-202ENST00000585847 CYTH1Q15438 398 aa12.79□□□□□ -0.36
VMP1-202ENST00000585847 IL31Q6EBC2 164 aa12.79□□□□□ -0.36
VMP1-202ENST00000585847 TMEM92Q6UXU6 159 aa12.79□□□□□ -0.36
VMP1-202ENST00000585847 CYS1Q717R9 158 aa12.79□□□□□ -0.36
VMP1-202ENST00000585847 B4GALNT4Q76KP1 1039 aa12.79□□□□□ -0.36
VMP1-202ENST00000585847 GSPT2Q8IYD1 628 aaKnown RBP12.79□□□□□ -0.36
VMP1-202ENST00000585847 SH2D3CQ8N5H7 860 aa12.79□□□□□ -0.36
VMP1-202ENST00000585847 ZNF366Q8N895 744 aa12.79□□□□□ -0.36
VMP1-202ENST00000585847 TXNDC5Q8NBS9 432 aaKnown RBP12.79□□□□□ -0.36
VMP1-202ENST00000585847 KCNV2Q8TDN2 545 aa12.79□□□□□ -0.36
VMP1-202ENST00000585847 SERPINB12Q96P63 405 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms