RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 WDR5P61964 334 aaKnown RBP11.37□□□□□ -0.59
LIG3-204ENST00000585740 POU4F1Q01851 419 aa11.37□□□□□ -0.59
LIG3-204ENST00000585740 TWF1Q12792 350 aa11.37□□□□□ -0.59
LIG3-204ENST00000585740 OVGP1Q12889 678 aa11.37□□□□□ -0.59
LIG3-204ENST00000585740 GRM3Q14832 879 aa11.37□□□□□ -0.59
LIG3-204ENST00000585740 KRT72Q14CN4 511 aa11.37□□□□□ -0.59
LIG3-204ENST00000585740 PCLAFQ15004 111 aa11.37□□□□□ -0.59
LIG3-204ENST00000585740 CNGA3Q16281 694 aa11.37□□□□□ -0.59
LIG3-204ENST00000585740 LRRC26Q2I0M4 334 aa11.37□□□□□ -0.59
LIG3-204ENST00000585740 MBLAC2Q68D91 279 aa11.37□□□□□ -0.59
LIG3-204ENST00000585740 IL31Q6EBC2 164 aa11.37□□□□□ -0.59
LIG3-204ENST00000585740 NEPROQ6NW34 567 aa11.37□□□□□ -0.59
LIG3-204ENST00000585740 RAPH1Q70E73 1250 aa11.37□□□□□ -0.59
LIG3-204ENST00000585740 DNAJB7Q7Z6W7 309 aaPredicted RBP11.37□□□□□ -0.59
LIG3-204ENST00000585740 CMC1Q7Z7K0 106 aa11.37□□□□□ -0.59
LIG3-204ENST00000585740 CIR1Q86X95 450 aaPredicted RBP11.37□□□□□ -0.59
LIG3-204ENST00000585740 DENND1CQ8IV53 801 aa11.37□□□□□ -0.59
LIG3-204ENST00000585740 SLC25A41Q8N5S1 370 aa11.37□□□□□ -0.59
LIG3-204ENST00000585740 MAFAQ8NHW3 353 aaPredicted RBP11.37□□□□□ -0.59
LIG3-204ENST00000585740 SCG3Q8WXD2 468 aaKnown RBP11.37□□□□□ -0.59
LIG3-204ENST00000585740 SKA1Q96BD8 255 aa11.37□□□□□ -0.59
LIG3-204ENST00000585740 VWCEQ96DN2 955 aa11.37□□□□□ -0.59
LIG3-204ENST00000585740 TSPAN17Q96FV3 270 aa11.37□□□□□ -0.59
LIG3-204ENST00000585740 CDX2Q99626 313 aaPredicted RBP11.37□□□□□ -0.59
LIG3-204ENST00000585740 SEMA3CQ99985 751 aa11.37□□□□□ -0.59
LIG3-204ENST00000585740 MGME1Q9BQP7 344 aa11.37□□□□□ -0.59
LIG3-204ENST00000585740 MFSD1Q9H3U5 465 aa11.37□□□□□ -0.59
LIG3-204ENST00000585740 NMRAL1Q9HBL8 299 aa11.37□□□□□ -0.59
LIG3-204ENST00000585740 HEY2Q9UBP5 337 aa11.37□□□□□ -0.59
LIG3-204ENST00000585740 GGT7Q9UJ14 662 aa11.37□□□□□ -0.59
LIG3-204ENST00000585740 STOML2Q9UJZ1 356 aa11.37□□□□□ -0.59
LIG3-204ENST00000585740 FBXO5Q9UKT4 447 aa11.37□□□□□ -0.59
LIG3-204ENST00000585740 SLC39A10Q9ULF5 831 aa11.37□□□□□ -0.59
LIG3-204ENST00000585740 CORO1CQ9ULV4 474 aaPredicted RBP11.37□□□□□ -0.59
LIG3-204ENST00000585740 ARIH1Q9Y4X5 557 aaPredicted RBP11.37□□□□□ -0.59
LIG3-204ENST00000585740 INSL5Q9Y5Q6 135 aa11.37□□□□□ -0.59
LIG3-204ENST00000585740 MRPL42Q9Y6G3 142 aaKnown RBP11.37□□□□□ -0.59
LIG3-204ENST00000585740 FAM95CA0A1B0GW59 222 aa11.36□□□□□ -0.59
LIG3-204ENST00000585740 MROH6A6NGR9 719 aa11.36□□□□□ -0.59
LIG3-204ENST00000585740 H3BNC9 293 aa11.36□□□□□ -0.59
LIG3-204ENST00000585740 SNUPNO95149 360 aaKnown RBP11.36□□□□□ -0.59
LIG3-204ENST00000585740 NDST3O95803 873 aa11.36□□□□□ -0.59
LIG3-204ENST00000585740 GSRP00390 522 aa11.36□□□□□ -0.59
LIG3-204ENST00000585740 AHSGP02765 367 aa11.36□□□□□ -0.59
LIG3-204ENST00000585740 ATXN1LP0C7T5 689 aaKnown RBP11.36□□□□□ -0.59
LIG3-204ENST00000585740 MBL2P11226 248 aaPredicted RBP11.36□□□□□ -0.59
LIG3-204ENST00000585740 RAG1P15918 1043 aa11.36□□□□□ -0.59
LIG3-204ENST00000585740 STMN1P16949 149 aa11.36□□□□□ -0.59
LIG3-204ENST00000585740 PFKLP17858 780 aa11.36□□□□□ -0.59
LIG3-204ENST00000585740 HOXD9P28356 352 aaPredicted RBP11.36□□□□□ -0.59
LIG3-204ENST00000585740 SLC1A6P48664 564 aa11.36□□□□□ -0.59
LIG3-204ENST00000585740 HK2P52789 917 aa11.36□□□□□ -0.59
LIG3-204ENST00000585740 RAB10P61026 200 aa11.36□□□□□ -0.59
LIG3-204ENST00000585740 ABCE1P61221 599 aaKnown RBP11.36□□□□□ -0.59
LIG3-204ENST00000585740 IRX4P78413 519 aa11.36□□□□□ -0.59
LIG3-204ENST00000585740 DEFB103AP81534 67 aa11.36□□□□□ -0.59
LIG3-204ENST00000585740 NSUN2Q08J23 767 aaKnown RBP eCLIP11.36□□□□□ -0.59
LIG3-204ENST00000585740 TBCCQ15814 346 aa11.36□□□□□ -0.59
LIG3-204ENST00000585740 PPM1JQ5JR12 505 aa11.36□□□□□ -0.59
LIG3-204ENST00000585740 SIRPB2Q5JXA9 342 aa11.36□□□□□ -0.59
LIG3-204ENST00000585740 RFWD3Q6PCD5 774 aa11.36□□□□□ -0.59
LIG3-204ENST00000585740 ASRGL1Q7L266 308 aa11.36□□□□□ -0.59
LIG3-204ENST00000585740 MTDHQ86UE4 582 aaKnown RBP11.36□□□□□ -0.59
LIG3-204ENST00000585740 ARID3BQ8IVW6 561 aaPredicted RBP11.36□□□□□ -0.59
LIG3-204ENST00000585740 PGBD5Q8N414 524 aa11.36□□□□□ -0.59
LIG3-204ENST00000585740 ATXN7L3BQ96GX2 97 aa11.36□□□□□ -0.59
LIG3-204ENST00000585740 ZNF778Q96MU6 729 aa11.36□□□□□ -0.59
LIG3-204ENST00000585740 TMEM237Q96Q45 408 aa11.36□□□□□ -0.59
LIG3-204ENST00000585740 PSKH2Q96QS6 385 aa11.36□□□□□ -0.59
LIG3-204ENST00000585740 YME1L1Q96TA2 773 aa11.36□□□□□ -0.59
LIG3-204ENST00000585740 LBHD1Q9BQE6 289 aaPredicted RBP11.36□□□□□ -0.59
LIG3-204ENST00000585740 ACE2Q9BYF1 805 aaPredicted RBP11.36□□□□□ -0.59
LIG3-204ENST00000585740 LRMDAQ9H2I8 198 aa11.36□□□□□ -0.59
LIG3-204ENST00000585740 KCNK13Q9HB14 408 aa11.36□□□□□ -0.59
LIG3-204ENST00000585740 ARHGEF3Q9NR81 526 aa11.36□□□□□ -0.59
LIG3-204ENST00000585740 KLC4Q9NSK0 619 aa11.36□□□□□ -0.59
LIG3-204ENST00000585740 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.36□□□□□ -0.59
LIG3-204ENST00000585740 LNPEPQ9UIQ6 1025 aa11.36□□□□□ -0.59
LIG3-204ENST00000585740 LSM7Q9UK45 103 aaKnown RBP11.36□□□□□ -0.59
LIG3-204ENST00000585740 AGO1Q9UL18 857 aaKnown RBP11.36□□□□□ -0.59
LIG3-204ENST00000585740 SORCS3Q9UPU3 1222 aa11.36□□□□□ -0.59
LIG3-204ENST00000585740 ZNF510Q9Y2H8 683 aa11.36□□□□□ -0.59
LIG3-204ENST00000585740 TBC1D30Q9Y2I9 924 aa11.36□□□□□ -0.59
LIG3-204ENST00000585740 ACOT9Q9Y305 439 aa11.36□□□□□ -0.59
LIG3-204ENST00000585740 TRAFD1O14545 582 aaPredicted RBP11.35□□□□□ -0.59
LIG3-204ENST00000585740 TRIM13O60858 407 aa11.35□□□□□ -0.59
LIG3-204ENST00000585740 F11P03951 625 aa11.35□□□□□ -0.59
LIG3-204ENST00000585740 PRKCGP05129 697 aa11.35□□□□□ -0.59
LIG3-204ENST00000585740 CTSAP10619 480 aa11.35□□□□□ -0.59
LIG3-204ENST00000585740 MYL2P10916 166 aa11.35□□□□□ -0.59
LIG3-204ENST00000585740 MYL4P12829 197 aa11.35□□□□□ -0.59
LIG3-204ENST00000585740 KCNA4P22459 653 aa11.35□□□□□ -0.59
LIG3-204ENST00000585740 ARNTP27540 789 aa11.35□□□□□ -0.59
LIG3-204ENST00000585740 SLC1A2P43004 574 aa11.35□□□□□ -0.59
LIG3-204ENST00000585740 CHRNA4P43681 627 aa11.35□□□□□ -0.59
LIG3-204ENST00000585740 LEPRP48357 1165 aaKnown RBP11.35□□□□□ -0.59
LIG3-204ENST00000585740 PRAMEP78395 509 aa11.35□□□□□ -0.59
LIG3-204ENST00000585740 MPP1Q00013 466 aa11.35□□□□□ -0.59
LIG3-204ENST00000585740 ACVR1Q04771 509 aa11.35□□□□□ -0.59
LIG3-204ENST00000585740 MSLNQ13421 630 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms