RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 SNX19Q92543 992 aa13.98□□□□□ -0.17
PRKCSH-202ENST00000585540 FEM1CQ96JP0 617 aa13.98□□□□□ -0.17
PRKCSH-202ENST00000585540 C1QTNF7Q9BXJ2 289 aa13.98□□□□□ -0.17
PRKCSH-202ENST00000585540 POLR1EQ9GZS1 481 aaKnown RBP13.98□□□□□ -0.17
PRKCSH-202ENST00000585540 SUV39H2Q9H5I1 410 aa13.98□□□□□ -0.17
PRKCSH-202ENST00000585540 TMEM74BQ9NUR3 256 aa13.98□□□□□ -0.17
PRKCSH-202ENST00000585540 KCTD5Q9NXV2 234 aa13.98□□□□□ -0.17
PRKCSH-202ENST00000585540 EIF2B4Q9UI10 523 aaKnown RBP13.98□□□□□ -0.17
PRKCSH-202ENST00000585540 PCDHA3Q9Y5H8 950 aa13.98□□□□□ -0.17
PRKCSH-202ENST00000585540 FADS3Q9Y5Q0 445 aa13.98□□□□□ -0.17
PRKCSH-202ENST00000585540 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.98□□□□□ -0.17
PRKCSH-202ENST00000585540 NUMA1Q14980 2115 aa13.97□□□□□ -0.17
PRKCSH-202ENST00000585540 ATXN2Q99700 1313 aaKnown RBP13.97□□□□□ -0.17
PRKCSH-202ENST00000585540 PCDH15Q96QU1 1955 aa13.97□□□□□ -0.17
PRKCSH-202ENST00000585540 FAM47DPA6NHR8 397 aa13.97□□□□□ -0.17
PRKCSH-202ENST00000585540 PRAMEF26H0Y7S4 382 aa13.97□□□□□ -0.17
PRKCSH-202ENST00000585540 ARHGAP33O14559 1287 aa13.97□□□□□ -0.17
PRKCSH-202ENST00000585540 TOR1BO14657 336 aa13.97□□□□□ -0.17
PRKCSH-202ENST00000585540 PEX11BO96011 259 aa13.97□□□□□ -0.17
PRKCSH-202ENST00000585540 UGT2B4P06133 528 aa13.97□□□□□ -0.17
PRKCSH-202ENST00000585540 CCDC175P0C221 793 aa13.97□□□□□ -0.17
PRKCSH-202ENST00000585540 ZNF883P0CG24 379 aa13.97□□□□□ -0.17
PRKCSH-202ENST00000585540 KRT10P13645 584 aa13.97□□□□□ -0.17
PRKCSH-202ENST00000585540 TNNT1P13805 278 aa13.97□□□□□ -0.17
PRKCSH-202ENST00000585540 CR2P20023 1033 aa13.97□□□□□ -0.17
PRKCSH-202ENST00000585540 XPAP23025 273 aaPredicted RBP13.97□□□□□ -0.17
PRKCSH-202ENST00000585540 AKT2P31751 481 aa13.97□□□□□ -0.17
PRKCSH-202ENST00000585540 CDKN2BP42772 138 aa13.97□□□□□ -0.17
PRKCSH-202ENST00000585540 RWDD2BP57060 319 aa13.97□□□□□ -0.17
PRKCSH-202ENST00000585540 PPIDQ08752 370 aaKnown RBP13.97□□□□□ -0.17
PRKCSH-202ENST00000585540 CCDC173Q0VFZ6 552 aa13.97□□□□□ -0.17
PRKCSH-202ENST00000585540 SLC14A1Q13336 389 aa13.97□□□□□ -0.17
PRKCSH-202ENST00000585540 ATXN7L2Q5T6C5 722 aaPredicted RBP13.97□□□□□ -0.17
PRKCSH-202ENST00000585540 ERAP2Q6P179 960 aa13.97□□□□□ -0.17
PRKCSH-202ENST00000585540 SPOCD1Q6ZMY3 1216 aa13.97□□□□□ -0.17
PRKCSH-202ENST00000585540 CCDC13Q8IYE1 715 aa13.97□□□□□ -0.17
PRKCSH-202ENST00000585540 ZCCHC9Q8N567 271 aaKnown RBP13.97□□□□□ -0.17
PRKCSH-202ENST00000585540 UBL4BQ8N7F7 174 aa13.97□□□□□ -0.17
PRKCSH-202ENST00000585540 PLD5Q8N7P1 536 aa13.97□□□□□ -0.17
PRKCSH-202ENST00000585540 TSEN2Q8NCE0 465 aaKnown RBP13.97□□□□□ -0.17
PRKCSH-202ENST00000585540 ECHDC3Q96DC8 303 aa13.97□□□□□ -0.17
PRKCSH-202ENST00000585540 KLHL32Q96NJ5 620 aa13.97□□□□□ -0.17
PRKCSH-202ENST00000585540 FERMT1Q9BQL6 677 aa13.97□□□□□ -0.17
PRKCSH-202ENST00000585540 MIR1-1HGQ9H1L0 117 aa13.97□□□□□ -0.17
PRKCSH-202ENST00000585540 TM9SF3Q9HD45 589 aa13.97□□□□□ -0.17
PRKCSH-202ENST00000585540 DLL3Q9NYJ7 618 aa13.97□□□□□ -0.17
PRKCSH-202ENST00000585540 DTLQ9NZJ0 730 aa13.97□□□□□ -0.17
PRKCSH-202ENST00000585540 AMFRQ9UKV5 643 aa13.97□□□□□ -0.17
PRKCSH-202ENST00000585540 DNPEPQ9ULA0 475 aa13.97□□□□□ -0.17
PRKCSH-202ENST00000585540 ACTL7AQ9Y615 435 aa13.97□□□□□ -0.17
PRKCSH-202ENST00000585540 GRID2IPA4D2P6 1211 aa13.96□□□□□ -0.17
PRKCSH-202ENST00000585540 UPK3BL1B0FP48 263 aa13.96□□□□□ -0.17
PRKCSH-202ENST00000585540 UPK3BL2E5RIL1 263 aa13.96□□□□□ -0.17
PRKCSH-202ENST00000585540 AREL1O15033 823 aa13.96□□□□□ -0.17
PRKCSH-202ENST00000585540 VILLO15195 856 aa13.96□□□□□ -0.17
PRKCSH-202ENST00000585540 ENGP17813 658 aa13.96□□□□□ -0.17
PRKCSH-202ENST00000585540 HNRNPA2B1P22626 353 aaKnown RBP13.96□□□□□ -0.17
PRKCSH-202ENST00000585540 TAS2R38P59533 333 aa13.96□□□□□ -0.17
PRKCSH-202ENST00000585540 IRX4P78413 519 aa13.96□□□□□ -0.17
PRKCSH-202ENST00000585540 IFI35P80217 286 aaPredicted RBP13.96□□□□□ -0.17
PRKCSH-202ENST00000585540 SF3A2Q15428 464 aaKnown RBP13.96□□□□□ -0.17
PRKCSH-202ENST00000585540 SLC14A2Q15849 920 aa13.96□□□□□ -0.17
PRKCSH-202ENST00000585540 ADAT2Q7Z6V5 191 aaKnown RBP13.96□□□□□ -0.17
PRKCSH-202ENST00000585540 RFX6Q8HWS3 928 aa13.96□□□□□ -0.17
PRKCSH-202ENST00000585540 DCP2Q8IU60 420 aaKnown RBP13.96□□□□□ -0.17
PRKCSH-202ENST00000585540 NDUFAF2Q8N183 169 aa13.96□□□□□ -0.17
PRKCSH-202ENST00000585540 LRRC57Q8N9N7 239 aa13.96□□□□□ -0.17
PRKCSH-202ENST00000585540 OLFM3Q96PB7 478 aa13.96□□□□□ -0.17
PRKCSH-202ENST00000585540 LENG8Q96PV6 779 aaPredicted RBP13.96□□□□□ -0.17
PRKCSH-202ENST00000585540 ALS2CR12Q96Q35 445 aa13.96□□□□□ -0.17
PRKCSH-202ENST00000585540 ORAI3Q9BRQ5 295 aa13.96□□□□□ -0.17
PRKCSH-202ENST00000585540 SCUBE2Q9NQ36 999 aa13.96□□□□□ -0.17
PRKCSH-202ENST00000585540 DNAAF2Q9NVR5 837 aaKnown RBP13.96□□□□□ -0.17
PRKCSH-202ENST00000585540 CAPN6Q9Y6Q1 641 aa13.96□□□□□ -0.17
PRKCSH-202ENST00000585540 hCG_1818297A0A087WSY0 165 aa13.95□□□□□ -0.18
PRKCSH-202ENST00000585540 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.95□□□□□ -0.18
PRKCSH-202ENST00000585540 HACD1B0YJ81 288 aa13.95□□□□□ -0.18
PRKCSH-202ENST00000585540 APOC4-APOC2K7ER74 178 aa13.95□□□□□ -0.18
PRKCSH-202ENST00000585540 NEMP1O14524 444 aa13.95□□□□□ -0.18
PRKCSH-202ENST00000585540 INSIG1O15503 277 aa13.95□□□□□ -0.18
PRKCSH-202ENST00000585540 HTRA2O43464 458 aaPredicted RBP13.95□□□□□ -0.18
PRKCSH-202ENST00000585540 OPHN1O60890 802 aa13.95□□□□□ -0.18
PRKCSH-202ENST00000585540 PCDH8O95206 1070 aa13.95□□□□□ -0.18
PRKCSH-202ENST00000585540 APOC2P02655 101 aa13.95□□□□□ -0.18
PRKCSH-202ENST00000585540 CD38P28907 300 aa13.95□□□□□ -0.18
PRKCSH-202ENST00000585540 ID4P47928 161 aa13.95□□□□□ -0.18
PRKCSH-202ENST00000585540 MARCKSL1P49006 195 aa13.95□□□□□ -0.18
PRKCSH-202ENST00000585540 METAP1P53582 386 aa13.95□□□□□ -0.18
PRKCSH-202ENST00000585540 C21orf59P57076 290 aa13.95□□□□□ -0.18
PRKCSH-202ENST00000585540 GBE1Q04446 702 aa13.95□□□□□ -0.18
PRKCSH-202ENST00000585540 SLC10A7Q0GE19 358 aa13.95□□□□□ -0.18
PRKCSH-202ENST00000585540 GRIK2Q13002 908 aa13.95□□□□□ -0.18
PRKCSH-202ENST00000585540 UGP2Q16851 508 aa13.95□□□□□ -0.18
PRKCSH-202ENST00000585540 TMEM259Q4ZIN3 620 aa13.95□□□□□ -0.18
PRKCSH-202ENST00000585540 STPG1Q5TH74 334 aa13.95□□□□□ -0.18
PRKCSH-202ENST00000585540 MFSD7Q6UXD7 560 aa13.95□□□□□ -0.18
PRKCSH-202ENST00000585540 LEKR1Q6ZMV7 388 aa13.95□□□□□ -0.18
PRKCSH-202ENST00000585540 ARHGAP36Q6ZRI8 547 aa13.95□□□□□ -0.18
PRKCSH-202ENST00000585540 PEX26Q7Z412 305 aa13.95□□□□□ -0.18
PRKCSH-202ENST00000585540 TTC7BQ86TV6 843 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms