RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 TSHRP16473 764 aa14.66□□□□□ -0.06
SDF2-202ENST00000585428 ITIH2P19823 946 aa14.66□□□□□ -0.06
SDF2-202ENST00000585428 MMP8P22894 467 aa14.66□□□□□ -0.06
SDF2-202ENST00000585428 IGFALSP35858 605 aa14.66□□□□□ -0.06
SDF2-202ENST00000585428 MLLT3P42568 568 aaPredicted RBP14.66□□□□□ -0.06
SDF2-202ENST00000585428 THOP1P52888 689 aa14.66□□□□□ -0.06
SDF2-202ENST00000585428 PDX1P52945 283 aa14.66□□□□□ -0.06
SDF2-202ENST00000585428 LY6DQ14210 128 aa14.66□□□□□ -0.06
SDF2-202ENST00000585428 TPD52L1Q16890 204 aaPredicted RBP14.66□□□□□ -0.06
SDF2-202ENST00000585428 ATXN7L2Q5T6C5 722 aaPredicted RBP14.66□□□□□ -0.06
SDF2-202ENST00000585428 FAXCQ5TGI0 409 aa14.66□□□□□ -0.06
SDF2-202ENST00000585428 NAA35Q5VZE5 725 aa14.66□□□□□ -0.06
SDF2-202ENST00000585428 RWDD4Q6NW29 188 aaKnown RBP14.66□□□□□ -0.06
SDF2-202ENST00000585428 LVRNQ6Q4G3 990 aa14.66□□□□□ -0.06
SDF2-202ENST00000585428 CRTC1Q6UUV9 634 aa14.66□□□□□ -0.06
SDF2-202ENST00000585428 LEKR1Q6ZMV7 388 aa14.66□□□□□ -0.06
SDF2-202ENST00000585428 FAM114A1Q8IWE2 563 aa14.66□□□□□ -0.06
SDF2-202ENST00000585428 PHACTR4Q8IZ21 702 aa14.66□□□□□ -0.06
SDF2-202ENST00000585428 ARL14Q8N4G2 192 aa14.66□□□□□ -0.06
SDF2-202ENST00000585428 TP53I13Q8NBR0 393 aaPredicted RBP14.66□□□□□ -0.06
SDF2-202ENST00000585428 MSANTD4Q8NCY6 345 aa14.66□□□□□ -0.06
SDF2-202ENST00000585428 WDR36Q8NI36 951 aaKnown RBP14.66□□□□□ -0.06
SDF2-202ENST00000585428 WDR48Q8TAF3 677 aa14.66□□□□□ -0.06
SDF2-202ENST00000585428 EPS8L1Q8TE68 723 aa14.66□□□□□ -0.06
SDF2-202ENST00000585428 NAT6Q93015 286 aa14.66□□□□□ -0.06
SDF2-202ENST00000585428 COL26A1Q96A83 441 aa14.66□□□□□ -0.06
SDF2-202ENST00000585428 LRRC61Q9BV99 259 aa14.66□□□□□ -0.06
SDF2-202ENST00000585428 SLC13A1Q9BZW2 595 aa14.66□□□□□ -0.06
SDF2-202ENST00000585428 TTYH3Q9C0H2 523 aa14.66□□□□□ -0.06
SDF2-202ENST00000585428 NOL6Q9H6R4 1146 aaKnown RBP14.66□□□□□ -0.06
SDF2-202ENST00000585428 METTL5Q9NRN9 209 aaKnown RBP14.66□□□□□ -0.06
SDF2-202ENST00000585428 DKK3Q9UBP4 350 aa14.66□□□□□ -0.06
SDF2-202ENST00000585428 NOCTQ9UK39 431 aaKnown RBP14.66□□□□□ -0.06
SDF2-202ENST00000585428 TRPM6Q9BX84 2022 aa14.65□□□□□ -0.06
SDF2-202ENST00000585428 C2CD4BA6NLJ0 364 aa14.65□□□□□ -0.06
SDF2-202ENST00000585428 F8VZ95 297 aa14.65□□□□□ -0.06
SDF2-202ENST00000585428 TM7SF2O76062 418 aa14.65□□□□□ -0.06
SDF2-202ENST00000585428 TNFSF15O95150 251 aa14.65□□□□□ -0.06
SDF2-202ENST00000585428 ANXA6P08133 673 aa14.65□□□□□ -0.06
SDF2-202ENST00000585428 C6P13671 934 aa14.65□□□□□ -0.06
SDF2-202ENST00000585428 CHRNB2P17787 502 aa14.65□□□□□ -0.06
SDF2-202ENST00000585428 ERCC5P28715 1186 aaPredicted RBP14.65□□□□□ -0.06
SDF2-202ENST00000585428 PTPN9P43378 593 aa14.65□□□□□ -0.06
SDF2-202ENST00000585428 PEX5P50542 639 aa14.65□□□□□ -0.06
SDF2-202ENST00000585428 UBE2HP62256 183 aa14.65□□□□□ -0.06
SDF2-202ENST00000585428 PPARDQ03181 441 aa14.65□□□□□ -0.06
SDF2-202ENST00000585428 KLHL40Q2TBA0 621 aa14.65□□□□□ -0.06
SDF2-202ENST00000585428 INO80DQ53TQ3 878 aaPredicted RBP14.65□□□□□ -0.06
SDF2-202ENST00000585428 MACC1Q6ZN28 852 aa14.65□□□□□ -0.06
SDF2-202ENST00000585428 STRADAQ7RTN6 431 aa14.65□□□□□ -0.06
SDF2-202ENST00000585428 VPS36Q86VN1 386 aa14.65□□□□□ -0.06
SDF2-202ENST00000585428 ZNF677Q86XU0 584 aa14.65□□□□□ -0.06
SDF2-202ENST00000585428 PIP4P2Q8N4L2 257 aa14.65□□□□□ -0.06
SDF2-202ENST00000585428 GPT2Q8TD30 523 aa14.65□□□□□ -0.06
SDF2-202ENST00000585428 HCAR2Q8TDS4 363 aa14.65□□□□□ -0.06
SDF2-202ENST00000585428 CCDC3Q9BQI4 270 aa14.65□□□□□ -0.06
SDF2-202ENST00000585428 TDRD6O60522 2096 aaKnown RBP14.65□□□□□ -0.06
SDF2-202ENST00000585428 ZSCAN5CA6NGD5 496 aaPredicted RBP14.64□□□□□ -0.07
SDF2-202ENST00000585428 TMEM110-MUSTN1A8MSY1 372 aa14.64□□□□□ -0.07
SDF2-202ENST00000585428 BUB1O43683 1085 aa14.64□□□□□ -0.07
SDF2-202ENST00000585428 RAMP2O60895 175 aa14.64□□□□□ -0.07
SDF2-202ENST00000585428 SDC4P31431 198 aa14.64□□□□□ -0.07
SDF2-202ENST00000585428 HDAC4P56524 1084 aa14.64□□□□□ -0.07
SDF2-202ENST00000585428 PTP4A2Q12974 167 aa14.64□□□□□ -0.07
SDF2-202ENST00000585428 CLN3Q13286 438 aa14.64□□□□□ -0.07
SDF2-202ENST00000585428 CDO1Q16878 200 aa14.64□□□□□ -0.07
SDF2-202ENST00000585428 TMEM52BQ4KMG9 183 aa14.64□□□□□ -0.07
SDF2-202ENST00000585428 HSP90AA4PQ58FG1 418 aa14.64□□□□□ -0.07
SDF2-202ENST00000585428 ESRP1Q6NXG1 681 aaKnown RBP14.64□□□□□ -0.07
SDF2-202ENST00000585428 PHLDB2Q86SQ0 1253 aa14.64□□□□□ -0.07
SDF2-202ENST00000585428 SDR16C5Q8N3Y7 309 aa14.64□□□□□ -0.07
SDF2-202ENST00000585428 CCDC185Q8N715 623 aa14.64□□□□□ -0.07
SDF2-202ENST00000585428 JOSD2Q8TAC2 188 aa14.64□□□□□ -0.07
SDF2-202ENST00000585428 SLC30A5Q8TAD4 765 aa14.64□□□□□ -0.07
SDF2-202ENST00000585428 SLC20A1Q8WUM9 679 aa14.64□□□□□ -0.07
SDF2-202ENST00000585428 CASKIN2Q8WXE0 1202 aa14.64□□□□□ -0.07
SDF2-202ENST00000585428 TBC1D31Q96DN5 1066 aa14.64□□□□□ -0.07
SDF2-202ENST00000585428 MED8Q96G25 268 aa14.64□□□□□ -0.07
SDF2-202ENST00000585428 EPAS1Q99814 870 aa14.64□□□□□ -0.07
SDF2-202ENST00000585428 C1QTNF7Q9BXJ2 289 aa14.64□□□□□ -0.07
SDF2-202ENST00000585428 CPEB1Q9BZB8 566 aaKnown RBP14.64□□□□□ -0.07
SDF2-202ENST00000585428 KLC2Q9H0B6 622 aa14.64□□□□□ -0.07
SDF2-202ENST00000585428 RABGEF1Q9UJ41 708 aa14.64□□□□□ -0.07
SDF2-202ENST00000585428 TENM4Q6N022 2769 aa14.63□□□□□ -0.07
SDF2-202ENST00000585428 COL27A1Q8IZC6 1860 aaPredicted RBP14.63□□□□□ -0.07
SDF2-202ENST00000585428 CCDC187A0A096LP49 1063 aa14.63□□□□□ -0.07
SDF2-202ENST00000585428 TMCC1O94876 653 aa14.63□□□□□ -0.07
SDF2-202ENST00000585428 CELA2BP08218 269 aaPredicted RBP14.63□□□□□ -0.07
SDF2-202ENST00000585428 ITGA2BP08514 1039 aa14.63□□□□□ -0.07
SDF2-202ENST00000585428 UNGP13051 313 aaPredicted RBP14.63□□□□□ -0.07
SDF2-202ENST00000585428 RFC1P35251 1148 aaPredicted RBP14.63□□□□□ -0.07
SDF2-202ENST00000585428 BLKP51451 505 aa14.63□□□□□ -0.07
SDF2-202ENST00000585428 SUOXP51687 545 aa14.63□□□□□ -0.07
SDF2-202ENST00000585428 HK3P52790 923 aa14.63□□□□□ -0.07
SDF2-202ENST00000585428 FMO1Q01740 532 aa14.63□□□□□ -0.07
SDF2-202ENST00000585428 CDR2Q01850 454 aa14.63□□□□□ -0.07
SDF2-202ENST00000585428 RAD51Q06609 339 aa14.63□□□□□ -0.07
SDF2-202ENST00000585428 WSCD2Q2TBF2 565 aa14.63□□□□□ -0.07
SDF2-202ENST00000585428 LRRC73Q5JTD7 316 aa14.63□□□□□ -0.07
SDF2-202ENST00000585428 CCDC81Q6ZN84 652 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms