RNA–Protein interactions for RNA: ENST00000585223.1

DDX5-233, Transcript of DEAD-box helicase 5, human

TSL 2

Gene DDX5, Length 699 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX5-233	ENST00000585223	XRCC4	Q13426	336 aa		11.28	□□□□□ -0.6
DDX5-233	ENST00000585223	ELF2	Q15723	593 aa		11.28	□□□□□ -0.6
DDX5-233	ENST00000585223	CCDC6	Q16204	474 aa		11.28	□□□□□ -0.6
DDX5-233	ENST00000585223	BZW1	Q7L1Q6	419 aa	Known RBP	11.28	□□□□□ -0.6
DDX5-233	ENST00000585223	LPCAT2	Q7L5N7	544 aa		11.28	□□□□□ -0.6
DDX5-233	ENST00000585223	CDKL3	Q8IVW4	592 aa	Predicted RBP	11.28	□□□□□ -0.6
DDX5-233	ENST00000585223	ABCA7	Q8IZY2	2146 aa		11.28	□□□□□ -0.6
DDX5-233	ENST00000585223	SLC35B2	Q8TB61	432 aa		11.28	□□□□□ -0.6
DDX5-233	ENST00000585223	HTR3C	Q8WXA8	447 aa		11.28	□□□□□ -0.6
DDX5-233	ENST00000585223	SNX19	Q92543	992 aa		11.28	□□□□□ -0.6
DDX5-233	ENST00000585223	NKD2	Q969F2	451 aa	Predicted RBP	11.28	□□□□□ -0.6
DDX5-233	ENST00000585223	PPP1R16A	Q96I34	528 aa		11.28	□□□□□ -0.6
DDX5-233	ENST00000585223	LRIG1	Q96JA1	1093 aa		11.28	□□□□□ -0.6
DDX5-233	ENST00000585223	MS4A14	Q96JA4	679 aa		11.28	□□□□□ -0.6
DDX5-233	ENST00000585223	ZC3H10	Q96K80	434 aa	Known RBP	11.28	□□□□□ -0.6
DDX5-233	ENST00000585223	TUBGCP5	Q96RT8	1024 aa		11.28	□□□□□ -0.6
DDX5-233	ENST00000585223	HDAC8	Q9BY41	377 aa		11.28	□□□□□ -0.6
DDX5-233	ENST00000585223	CPEB1	Q9BZB8	566 aa	Known RBP	11.28	□□□□□ -0.6
DDX5-233	ENST00000585223	POLR1E	Q9GZS1	481 aa	Known RBP	11.28	□□□□□ -0.6
DDX5-233	ENST00000585223	SUV39H2	Q9H5I1	410 aa		11.28	□□□□□ -0.6
DDX5-233	ENST00000585223	ATP13A3	Q9H7F0	1226 aa		11.28	□□□□□ -0.6
DDX5-233	ENST00000585223	SGK2	Q9HBY8	427 aa		11.28	□□□□□ -0.6
DDX5-233	ENST00000585223	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.28	□□□□□ -0.6
DDX5-233	ENST00000585223	JRKL	Q9Y4A0	524 aa		11.28	□□□□□ -0.6
DDX5-233	ENST00000585223	SLCO1B1	Q9Y6L6	691 aa		11.28	□□□□□ -0.6
DDX5-233	ENST00000585223	SPAG17	Q6Q759	2223 aa		11.28	□□□□□ -0.6
DDX5-233	ENST00000585223	MEI4	A8MW99	385 aa		11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	PROB1	E7EW31	1015 aa		11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	TRAFD1	O14545	582 aa	Predicted RBP	11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	KCNN4	O15554	427 aa		11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	SLC7A4	O43246	635 aa		11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	EPN2	O95208	641 aa		11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	CP	P00450	1065 aa		11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	FGG	P02679	453 aa		11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	IGHV4-34	P06331	123 aa		11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	TIMP2	P16035	220 aa		11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	NFKB1	P19838	968 aa		11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	MAOB	P27338	520 aa		11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	SERPINA4	P29622	427 aa		11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	CD68	P34810	354 aa	Predicted RBP	11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	CD86	P42081	329 aa		11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	SKOR1	P84550	965 aa		11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	NSUN2	Q08J23	767 aa	Known RBP eCLIP	11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	SNX1	Q13596	522 aa		11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	PTPRR	Q15256	657 aa		11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	KCTD19	Q17RG1	926 aa	Predicted RBP	11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	LYSMD4	Q5XG99	296 aa		11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	KIAA0895L	Q68EN5	471 aa		11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	ALG1L	Q6GMV1	187 aa		11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	FBXL19	Q6PCT2	694 aa		11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	DARS2	Q6PI48	645 aa	Known RBP	11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	C11orf74	Q86VG3	221 aa		11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	ZNF567	Q8N184	647 aa		11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	DCLK2	Q8N568	766 aa		11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	OR2T34	Q8NGX1	318 aa		11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	COG1	Q8WTW3	980 aa		11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	PDCD6IP	Q8WUM4	868 aa	Known RBP	11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	C1orf54	Q8WWF1	131 aa		11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	KLK6	Q92876	244 aa		11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	BIRC7	Q96CA5	298 aa		11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	ECHDC3	Q96DC8	303 aa		11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	SMIM14	Q96QK8	99 aa		11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	OSBPL9	Q96SU4	736 aa		11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	RBM15	Q96T37	977 aa	Known RBP eCLIP	11.27	□□□□□ -0.61	3e-6	■■□□□ 11.8
DDX5-233	ENST00000585223	BRD8	Q9H0E9	1235 aa		11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	SMOC1	Q9H4F8	434 aa		11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	GLOD4	Q9HC38	313 aa		11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	KCND1	Q9NSA2	647 aa		11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	KLHL8	Q9P2G9	620 aa	Predicted RBP	11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	DNPEP	Q9ULA0	475 aa		11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	RAB23	Q9ULC3	237 aa		11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	FADS3	Q9Y5Q0	445 aa		11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	CACNA1H	O95180	2353 aa		11.27	□□□□□ -0.61
DDX5-233	ENST00000585223	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	11.26	□□□□□ -0.61
DDX5-233	ENST00000585223	METTL12	A8MUP2	240 aa		11.26	□□□□□ -0.61
DDX5-233	ENST00000585223	UPK3BL1	B0FP48	263 aa		11.26	□□□□□ -0.61
DDX5-233	ENST00000585223	C10orf142	B7Z368	130 aa		11.26	□□□□□ -0.61
DDX5-233	ENST00000585223	UPK3BL2	E5RIL1	263 aa		11.26	□□□□□ -0.61
DDX5-233	ENST00000585223	ZNF185	O15231	689 aa		11.26	□□□□□ -0.61
DDX5-233	ENST00000585223	HTRA2	O43464	458 aa	Predicted RBP	11.26	□□□□□ -0.61
DDX5-233	ENST00000585223	LIAS	O43766	372 aa		11.26	□□□□□ -0.61
DDX5-233	ENST00000585223	RNGTT	O60942	597 aa	Known RBP	11.26	□□□□□ -0.61
DDX5-233	ENST00000585223	RHOBTB1	O94844	696 aa		11.26	□□□□□ -0.61
DDX5-233	ENST00000585223	LMNA	P02545	664 aa	Known RBP	11.26	□□□□□ -0.61
DDX5-233	ENST00000585223	ITPKA	P23677	461 aa		11.26	□□□□□ -0.61
DDX5-233	ENST00000585223	MAT2A	P31153	395 aa	Known RBP	11.26	□□□□□ -0.61
DDX5-233	ENST00000585223	MAPK8	P45983	427 aa		11.26	□□□□□ -0.61
DDX5-233	ENST00000585223	GDF10	P55107	478 aa		11.26	□□□□□ -0.61
DDX5-233	ENST00000585223	CREB5	Q02930	508 aa		11.26	□□□□□ -0.61
DDX5-233	ENST00000585223	SFSWAP	Q12872	951 aa	Known RBP	11.26	□□□□□ -0.61
DDX5-233	ENST00000585223	LONRF2	Q1L5Z9	754 aa		11.26	□□□□□ -0.61
DDX5-233	ENST00000585223	TEX44	Q53QW1	395 aa		11.26	□□□□□ -0.61
DDX5-233	ENST00000585223	CFAP58	Q5T655	872 aa		11.26	□□□□□ -0.61
DDX5-233	ENST00000585223	SEL1L3	Q68CR1	1132 aa		11.26	□□□□□ -0.61
DDX5-233	ENST00000585223	LAIR1	Q6GTX8	287 aa		11.26	□□□□□ -0.61
DDX5-233	ENST00000585223	CYP2U1	Q7Z449	544 aa		11.26	□□□□□ -0.61
DDX5-233	ENST00000585223	PRUNE1	Q86TP1	453 aa		11.26	□□□□□ -0.61
DDX5-233	ENST00000585223	PRPF39	Q86UA1	669 aa	Known RBP	11.26	□□□□□ -0.61
DDX5-233	ENST00000585223	RASGEF1C	Q8N431	466 aa		11.26	□□□□□ -0.61
DDX5-233	ENST00000585223	PAF1	Q8N7H5	531 aa		11.26	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms