RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 CCDC97Q96F63 343 aaPredicted RBP15.21■□□□□ 0.03
VAPA-209ENST00000585042 SLC13A1Q9BZW2 595 aa15.21■□□□□ 0.03
VAPA-209ENST00000585042 LMBRD1Q9NUN5 540 aa15.21■□□□□ 0.03
VAPA-209ENST00000585042 PCDHGA8Q9Y5G5 932 aa15.21■□□□□ 0.03
VAPA-209ENST00000585042 ACTL7AQ9Y615 435 aa15.21■□□□□ 0.03
VAPA-209ENST00000585042 KALRNO60229 2985 aa15.21■□□□□ 0.02
VAPA-209ENST00000585042 CPED1A4D0V7 1026 aa15.2■□□□□ 0.02
VAPA-209ENST00000585042 SIGLEC16A6NMB1 481 aa15.2■□□□□ 0.02
VAPA-209ENST00000585042 WASH4PA8MWX3 477 aa15.2■□□□□ 0.02
VAPA-209ENST00000585042 ERVH48-1M5A8F1 160 aa15.2■□□□□ 0.02
VAPA-209ENST00000585042 IGSF6O95976 241 aa15.2■□□□□ 0.02
VAPA-209ENST00000585042 CALB1P05937 261 aa15.2■□□□□ 0.02
VAPA-209ENST00000585042 TGM2P21980 687 aa15.2■□□□□ 0.02
VAPA-209ENST00000585042 GKP32189 559 aa15.2■□□□□ 0.02
VAPA-209ENST00000585042 HTR7P34969 479 aa15.2■□□□□ 0.02
VAPA-209ENST00000585042 RFC1P35251 1148 aaPredicted RBP15.2■□□□□ 0.02
VAPA-209ENST00000585042 NSFP46459 744 aaKnown RBP15.2■□□□□ 0.02
VAPA-209ENST00000585042 TMPRSS3P57727 454 aa15.2■□□□□ 0.02
VAPA-209ENST00000585042 RHDQ02161 417 aa15.2■□□□□ 0.02
VAPA-209ENST00000585042 CDKN3Q16667 212 aa15.2■□□□□ 0.02
VAPA-209ENST00000585042 PARP15Q460N3 678 aa15.2■□□□□ 0.02
VAPA-209ENST00000585042 RAB6CQ53S08 254 aa15.2■□□□□ 0.02
VAPA-209ENST00000585042 CDKAL1Q5VV42 579 aa15.2■□□□□ 0.02
VAPA-209ENST00000585042 LVRNQ6Q4G3 990 aa15.2■□□□□ 0.02
VAPA-209ENST00000585042 RBM44Q6ZP01 1051 aaKnown RBP15.2■□□□□ 0.02
VAPA-209ENST00000585042 RTL3Q8N8U3 475 aaKnown RBP15.2■□□□□ 0.02
VAPA-209ENST00000585042 C3orf20Q8ND61 904 aa15.2■□□□□ 0.02
VAPA-209ENST00000585042 JOSD2Q8TAC2 188 aa15.2■□□□□ 0.02
VAPA-209ENST00000585042 CXorf40AQ8TE69 158 aa15.2■□□□□ 0.02
VAPA-209ENST00000585042 SNRNP27Q8WVK2 155 aaKnown RBP15.2■□□□□ 0.02
VAPA-209ENST00000585042 SLC46A1Q96NT5 459 aa15.2■□□□□ 0.02
VAPA-209ENST00000585042 C11orf70Q9BRQ4 267 aa15.2■□□□□ 0.02
VAPA-209ENST00000585042 SELENOOQ9BVL4 669 aa15.2■□□□□ 0.02
VAPA-209ENST00000585042 RAB6CQ9H0N0 254 aa15.2■□□□□ 0.02
VAPA-209ENST00000585042 ASCL3Q9NQ33 180 aa15.2■□□□□ 0.02
VAPA-209ENST00000585042 ADAM22Q9P0K1 906 aa15.2■□□□□ 0.02
VAPA-209ENST00000585042 APOBEC3BQ9UH17 382 aaKnown RBP15.2■□□□□ 0.02
VAPA-209ENST00000585042 TMCC1O94876 653 aa15.19■□□□□ 0.02
VAPA-209ENST00000585042 ANXA6P08133 673 aa15.19■□□□□ 0.02
VAPA-209ENST00000585042 MYF5P13349 255 aa15.19■□□□□ 0.02
VAPA-209ENST00000585042 TIMP2P16035 220 aa15.19■□□□□ 0.02
VAPA-209ENST00000585042 GPD1P21695 349 aa15.19■□□□□ 0.02
VAPA-209ENST00000585042 EPHB2P29323 1055 aa15.19■□□□□ 0.02
VAPA-209ENST00000585042 RBMS1P29558 406 aaKnown RBP15.19■□□□□ 0.02
VAPA-209ENST00000585042 CXADRP78310 365 aa15.19■□□□□ 0.02
VAPA-209ENST00000585042 ELP6Q0PNE2 266 aa15.19■□□□□ 0.02
VAPA-209ENST00000585042 AGERQ15109 404 aa15.19■□□□□ 0.02
VAPA-209ENST00000585042 DEFB133Q30KQ1 61 aa15.19■□□□□ 0.02
VAPA-209ENST00000585042 TMEM52BQ4KMG9 183 aa15.19■□□□□ 0.02
VAPA-209ENST00000585042 EFHC2Q5JST6 749 aa15.19■□□□□ 0.02
VAPA-209ENST00000585042 C6orf132Q5T0Z8 1188 aa15.19■□□□□ 0.02
VAPA-209ENST00000585042 GUSBP11Q6P575 273 aa15.19■□□□□ 0.02
VAPA-209ENST00000585042 WDR59Q6PJI9 974 aa15.19■□□□□ 0.02
VAPA-209ENST00000585042 MACC1Q6ZN28 852 aa15.19■□□□□ 0.02
VAPA-209ENST00000585042 EFL1Q7Z2Z2 1120 aaKnown RBP15.19■□□□□ 0.02
VAPA-209ENST00000585042 PHACTR4Q8IZ21 702 aa15.19■□□□□ 0.02
VAPA-209ENST00000585042 UMODL1-AS1Q8N2C9 162 aa15.19■□□□□ 0.02
VAPA-209ENST00000585042 FSTL5Q8N475 847 aaPredicted RBP15.19■□□□□ 0.02
VAPA-209ENST00000585042 CCDC185Q8N715 623 aa15.19■□□□□ 0.02
VAPA-209ENST00000585042 OR6K2Q8NGY2 324 aa15.19■□□□□ 0.02
VAPA-209ENST00000585042 KCNE4Q8WWG9 221 aa15.19■□□□□ 0.02
VAPA-209ENST00000585042 SCG3Q8WXD2 468 aaKnown RBP15.19■□□□□ 0.02
VAPA-209ENST00000585042 VPS16Q9H269 839 aa15.19■□□□□ 0.02
VAPA-209ENST00000585042 NOL6Q9H6R4 1146 aaKnown RBP15.19■□□□□ 0.02
VAPA-209ENST00000585042 CATSPERBQ9H7T0 1116 aa15.19■□□□□ 0.02
VAPA-209ENST00000585042 FAM207AQ9NSI2 230 aaPredicted RBP15.19■□□□□ 0.02
VAPA-209ENST00000585042 TAB2Q9NYJ8 693 aa15.19■□□□□ 0.02
VAPA-209ENST00000585042 GGT7Q9UJ14 662 aa15.19■□□□□ 0.02
VAPA-209ENST00000585042 HELZ2Q9BYK8 2649 aaKnown RBP15.19■□□□□ 0.02
VAPA-209ENST00000585042 ANKRD62A6NC57 917 aa15.18■□□□□ 0.02
VAPA-209ENST00000585042 MMP20O60882 483 aa15.18■□□□□ 0.02
VAPA-209ENST00000585042 GCATO75600 419 aa15.18■□□□□ 0.02
VAPA-209ENST00000585042 C1QL1O75973 258 aa15.18■□□□□ 0.02
VAPA-209ENST00000585042 MBD3O95983 291 aa15.18■□□□□ 0.02
VAPA-209ENST00000585042 IGFALSP35858 605 aa15.18■□□□□ 0.02
VAPA-209ENST00000585042 EIF4A3P38919 411 aaKnown RBP15.18■□□□□ 0.02
VAPA-209ENST00000585042 ZNF143P52747 638 aaPredicted RBP15.18■□□□□ 0.02
VAPA-209ENST00000585042 ADKP55263 362 aaKnown RBP15.18■□□□□ 0.02
VAPA-209ENST00000585042 RHOAP61586 193 aa15.18■□□□□ 0.02
VAPA-209ENST00000585042 SKOR1P84550 965 aa15.18■□□□□ 0.02
VAPA-209ENST00000585042 PPARDQ03181 441 aa15.18■□□□□ 0.02
VAPA-209ENST00000585042 SERINC3Q13530 473 aa15.18■□□□□ 0.02
VAPA-209ENST00000585042 KRT31Q15323 416 aa15.18■□□□□ 0.02
VAPA-209ENST00000585042 CLEC16AQ2KHT3 1053 aa15.18■□□□□ 0.02
VAPA-209ENST00000585042 PRRT3Q5FWE3 981 aa15.18■□□□□ 0.02
VAPA-209ENST00000585042 TPRG1LQ5T0D9 272 aa15.18■□□□□ 0.02
VAPA-209ENST00000585042 ATXN7L2Q5T6C5 722 aaPredicted RBP15.18■□□□□ 0.02
VAPA-209ENST00000585042 FAXCQ5TGI0 409 aa15.18■□□□□ 0.02
VAPA-209ENST00000585042 ESRP1Q6NXG1 681 aaKnown RBP15.18■□□□□ 0.02
VAPA-209ENST00000585042 VPS36Q86VN1 386 aa15.18■□□□□ 0.02
VAPA-209ENST00000585042 TP53I13Q8NBR0 393 aaPredicted RBP15.18■□□□□ 0.02
VAPA-209ENST00000585042 ZNF641Q96N77 438 aaPredicted RBP15.18■□□□□ 0.02
VAPA-209ENST00000585042 PCDHB18PQ96TA0 734 aa15.18■□□□□ 0.02
VAPA-209ENST00000585042 EPAS1Q99814 870 aa15.18■□□□□ 0.02
VAPA-209ENST00000585042 MAGEB5Q9BZ81 275 aa15.18■□□□□ 0.02
VAPA-209ENST00000585042 CAAP1Q9H8G2 361 aa15.18■□□□□ 0.02
VAPA-209ENST00000585042 NLRC4Q9NPP4 1024 aa15.18■□□□□ 0.02
VAPA-209ENST00000585042 PADI4Q9UM07 663 aa15.18■□□□□ 0.02
VAPA-209ENST00000585042 ITM2BQ9Y287 266 aa15.18■□□□□ 0.02
VAPA-209ENST00000585042 SIK3Q9Y2K2 1263 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms