RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 TMEM110-MUSTN1A8MSY1 372 aa20.66■□□□□ 0.9
SS18-224ENST00000584083 HYAL3O43820 417 aaPredicted RBP20.66■□□□□ 0.9
SS18-224ENST00000584083 TRIM16O95361 564 aa20.66■□□□□ 0.9
SS18-224ENST00000584083 TMEM253P0C7T8 217 aa20.66■□□□□ 0.9
SS18-224ENST00000584083 FTH1P19P0C7X4 201 aa20.66■□□□□ 0.9
SS18-224ENST00000584083 TIMP2P16035 220 aa20.66■□□□□ 0.9
SS18-224ENST00000584083 FGL2Q14314 439 aa20.66■□□□□ 0.9
SS18-224ENST00000584083 RFTN1Q14699 578 aaPredicted RBP20.66■□□□□ 0.9
SS18-224ENST00000584083 SHBQ15464 509 aa20.66■□□□□ 0.9
SS18-224ENST00000584083 SARM1Q6SZW1 724 aa20.66■□□□□ 0.9
SS18-224ENST00000584083 SRLQ86TD4 932 aa20.66■□□□□ 0.9
SS18-224ENST00000584083 CPNE8Q86YQ8 564 aa20.66■□□□□ 0.9
SS18-224ENST00000584083 PAF1Q8N7H5 531 aa20.66■□□□□ 0.9
SS18-224ENST00000584083 SUV39H2Q9H5I1 410 aa20.66■□□□□ 0.9
SS18-224ENST00000584083 GOLGA8CPA6NN73 597 aa20.65■□□□□ 0.9
SS18-224ENST00000584083 AREL1O15033 823 aa20.65■□□□□ 0.9
SS18-224ENST00000584083 SERPINB6P35237 376 aa20.65■□□□□ 0.9
SS18-224ENST00000584083 RGRP47804 291 aa20.65■□□□□ 0.9
SS18-224ENST00000584083 RXRGP48443 463 aa20.65■□□□□ 0.9
SS18-224ENST00000584083 MMRN1Q13201 1228 aa20.65■□□□□ 0.9
SS18-224ENST00000584083 GCNT7Q6ZNI0 430 aa20.65■□□□□ 0.9
SS18-224ENST00000584083 CHCHD4Q8N4Q1 142 aa20.65■□□□□ 0.9
SS18-224ENST00000584083 PNPLA1Q8N8W4 532 aa20.65■□□□□ 0.9
SS18-224ENST00000584083 OR13H1Q8NG92 308 aa20.65■□□□□ 0.9
SS18-224ENST00000584083 BAHD1Q8TBE0 780 aaPredicted RBP20.65■□□□□ 0.9
SS18-224ENST00000584083 SAP25Q8TEE9 199 aa20.65■□□□□ 0.9
SS18-224ENST00000584083 TSC1Q92574 1164 aa20.65■□□□□ 0.9
SS18-224ENST00000584083 ZNF641Q96N77 438 aaPredicted RBP20.65■□□□□ 0.9
SS18-224ENST00000584083 TUBGCP5Q96RT8 1024 aa20.65■□□□□ 0.9
SS18-224ENST00000584083 SCNM1Q9BWG6 230 aa20.65■□□□□ 0.9
SS18-224ENST00000584083 C1QTNF2Q9BXJ5 285 aa20.65■□□□□ 0.9
SS18-224ENST00000584083 RCOR3Q9P2K3 495 aaPredicted RBP20.65■□□□□ 0.9
SS18-224ENST00000584083 SEPT3Q9UH03 358 aa20.65■□□□□ 0.9
SS18-224ENST00000584083 LCMT1Q9UIC8 334 aa20.65■□□□□ 0.9
SS18-224ENST00000584083 WASF3Q9UPY6 502 aa20.65■□□□□ 0.9
SS18-224ENST00000584083 HS3ST3A1Q9Y663 406 aa20.65■□□□□ 0.9
SS18-224ENST00000584083 A6NNZ2 444 aa20.64■□□□□ 0.89
SS18-224ENST00000584083 RAD51BO15315 384 aa20.64■□□□□ 0.89
SS18-224ENST00000584083 SPINT1O43278 529 aa20.64■□□□□ 0.89
SS18-224ENST00000584083 CD48P09326 243 aa20.64■□□□□ 0.89
SS18-224ENST00000584083 ITIH2P19823 946 aa20.64■□□□□ 0.89
SS18-224ENST00000584083 EPHA8P29322 1005 aaPredicted RBP20.64■□□□□ 0.89
SS18-224ENST00000584083 CSNK1DP48730 415 aa20.64■□□□□ 0.89
SS18-224ENST00000584083 BNIP3Q12983 259 aa20.64■□□□□ 0.89
SS18-224ENST00000584083 TBX2Q13207 712 aaPredicted RBP20.64■□□□□ 0.89
SS18-224ENST00000584083 MESDQ14696 234 aa20.64■□□□□ 0.89
SS18-224ENST00000584083 LBRQ14739 615 aaKnown RBP20.64■□□□□ 0.89
SS18-224ENST00000584083 ATP13A4Q4VNC1 1196 aa20.64■□□□□ 0.89
SS18-224ENST00000584083 ZFYVE27Q5T4F4 411 aa20.64■□□□□ 0.89
SS18-224ENST00000584083 TMCO4Q5TGY1 634 aa20.64■□□□□ 0.89
SS18-224ENST00000584083 Q6ZSR6 202 aa20.64■□□□□ 0.89
SS18-224ENST00000584083 PTAR1Q7Z6K3 402 aaPredicted RBP20.64■□□□□ 0.89
SS18-224ENST00000584083 ABI3BPQ7Z7G0 1075 aa20.64■□□□□ 0.89
SS18-224ENST00000584083 CAMK1DQ8IU85 385 aa20.64■□□□□ 0.89
SS18-224ENST00000584083 ATPAF2Q8N5M1 289 aa20.64■□□□□ 0.89
SS18-224ENST00000584083 KCTD6Q8NC69 237 aa20.64■□□□□ 0.89
SS18-224ENST00000584083 SLC35G2Q8TBE7 412 aa20.64■□□□□ 0.89
SS18-224ENST00000584083 FAM174AQ8TBP5 190 aa20.64■□□□□ 0.89
SS18-224ENST00000584083 HCAR2Q8TDS4 363 aa20.64■□□□□ 0.89
SS18-224ENST00000584083 CXorf40AQ8TE69 158 aa20.64■□□□□ 0.89
SS18-224ENST00000584083 ZNF599Q96NL3 588 aa20.64■□□□□ 0.89
SS18-224ENST00000584083 WRAP53Q9BUR4 548 aaKnown RBP20.64■□□□□ 0.89
SS18-224ENST00000584083 ATP13A3Q9H7F0 1226 aa20.64■□□□□ 0.89
SS18-224ENST00000584083 FTSJ1Q9UET6 329 aa20.64■□□□□ 0.89
SS18-224ENST00000584083 ACACBO00763 2458 aa20.64■□□□□ 0.89
SS18-224ENST00000584083 LRRK1Q38SD2 2015 aa20.63■□□□□ 0.89
SS18-224ENST00000584083 POM121BA6NF01 834 aa20.63■□□□□ 0.89
SS18-224ENST00000584083 FPGTO14772 594 aa20.63■□□□□ 0.89
SS18-224ENST00000584083 TNFSF14O43557 240 aa20.63■□□□□ 0.89
SS18-224ENST00000584083 BUB1BO60566 1050 aaPredicted RBP20.63■□□□□ 0.89
SS18-224ENST00000584083 MMP20O60882 483 aa20.63■□□□□ 0.89
SS18-224ENST00000584083 ATXN1LP0C7T5 689 aaKnown RBP20.63■□□□□ 0.89
SS18-224ENST00000584083 SERPINA4P29622 427 aa20.63■□□□□ 0.89
SS18-224ENST00000584083 SCNN1BP51168 640 aa20.63■□□□□ 0.89
SS18-224ENST00000584083 RENBPP51606 427 aa20.63■□□□□ 0.89
SS18-224ENST00000584083 SUOXP51687 545 aa20.63■□□□□ 0.89
SS18-224ENST00000584083 TAS2R40P59535 323 aa20.63■□□□□ 0.89
SS18-224ENST00000584083 NSUN2Q08J23 767 aaKnown RBP eCLIP20.63■□□□□ 0.89
SS18-224ENST00000584083 SLC10A7Q0GE19 358 aa20.63■□□□□ 0.89
SS18-224ENST00000584083 ELP6Q0PNE2 266 aa20.63■□□□□ 0.89
SS18-224ENST00000584083 ZNF235Q14590 738 aa20.63■□□□□ 0.89
SS18-224ENST00000584083 SLCO6A1Q86UG4 719 aa20.63■□□□□ 0.89
SS18-224ENST00000584083 EID2Q8N6I1 236 aa20.63■□□□□ 0.89
SS18-224ENST00000584083 NSMCE1Q8WV22 266 aa20.63■□□□□ 0.89
SS18-224ENST00000584083 ASB12Q8WXK4 309 aa20.63■□□□□ 0.89
SS18-224ENST00000584083 BMFQ96LC9 184 aa20.63■□□□□ 0.89
SS18-224ENST00000584083 LENG8Q96PV6 779 aaPredicted RBP20.63■□□□□ 0.89
SS18-224ENST00000584083 KLHL11Q9NVR0 708 aa20.63■□□□□ 0.89
SS18-224ENST00000584083 SDC3O75056 442 aa20.62■□□□□ 0.89
SS18-224ENST00000584083 TM7SF2O76062 418 aa20.62■□□□□ 0.89
SS18-224ENST00000584083 KRT7P08729 469 aa20.62■□□□□ 0.89
SS18-224ENST00000584083 IL4RP24394 825 aa20.62■□□□□ 0.89
SS18-224ENST00000584083 MAN1A1P33908 653 aa20.62■□□□□ 0.89
SS18-224ENST00000584083 ARSEP51690 589 aa20.62■□□□□ 0.89
SS18-224ENST00000584083 BCL2L1Q07817 233 aa20.62■□□□□ 0.89
SS18-224ENST00000584083 DPYSL3Q14195 570 aa20.62■□□□□ 0.89
SS18-224ENST00000584083 PDK2Q15119 407 aa20.62■□□□□ 0.89
SS18-224ENST00000584083 UGP2Q16851 508 aa20.62■□□□□ 0.89
SS18-224ENST00000584083 CCDC157Q569K6 752 aa20.62■□□□□ 0.89
SS18-224ENST00000584083 BRAT1Q6PJG6 821 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms