RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-231	ENST00000584063	ECSIT	Q9BQ95	431 aa		11.74	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	KLC2	Q9H0B6	622 aa		11.74	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	WWP1	Q9H0M0	922 aa		11.74	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	VPS45	Q9NRW7	570 aa		11.74	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	ADAMTS6	Q9UKP5	1117 aa		11.74	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	ZMIZ1	Q9ULJ6	1067 aa		11.74	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	PLA2G4C	Q9UP65	541 aa		11.74	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	GMEB1	Q9Y692	573 aa		11.74	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063		A0A088AWK7	358 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	TM7SF2	O76062	418 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	ALDH1A1	P00352	501 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	ATP5B	P06576	529 aa	Known RBP	11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	MGAT1	P26572	445 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	TKT	P29401	623 aa	Known RBP	11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	NDUFV1	P49821	464 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	VAC14	Q08AM6	782 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	INCA1	Q0VD86	236 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	DLG1	Q12959	904 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	ITGA9	Q13797	1035 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	PAN2	Q504Q3	1202 aa	Known RBP	11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	NEPRO	Q6NW34	567 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	MAVS	Q7Z434	540 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	DEFB107A	Q8IZN7	70 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	CCNY	Q8ND76	341 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	GATA6	Q92908	595 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	SIGLEC10	Q96LC7	697 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	OCEL1	Q9H607	264 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	MTMR10	Q9NXD2	777 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	KCNK4	Q9NYG8	393 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	PAK5	Q9P286	719 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	SH3BGRL2	Q9UJC5	107 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	ST3GAL5	Q9UNP4	418 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063		A8MXQ7	604 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	SIN3B	O75182	1162 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	ALDOA	P04075	364 aa	Known RBP	11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	P4HA1	P13674	534 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	POU2F1	P14859	743 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	GRM5	P41594	1212 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	MAPK9	P45984	424 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	SLC1A6	P48664	564 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	SLC6A3	Q01959	620 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	DSG1	Q02413	1049 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	C6orf163	Q5TEZ5	329 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	SMYD5	Q6GMV2	418 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	PAOX	Q6QHF9	649 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	GALNT15	Q8N3T1	639 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	TOR1AIP2	Q8NFQ8	470 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	CDKL2	Q92772	493 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	UCN2	Q96RP3	112 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	INIP	Q9NRY2	104 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	TMEM216	Q9P0N5	145 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	ASB3	Q9Y575	518 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	SMIM28	A0A1B0GU29	152 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	HAS3	O00219	553 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	GPR37	O15354	613 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	CFLAR	O15519	480 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	HOXC11	O43248	304 aa	Predicted RBP	11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	BEST1	O76090	585 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	TCN1	P20061	433 aa	Predicted RBP	11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	L1CAM	P32004	1257 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	SOX11	P35716	441 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	SERPINB5	P36952	375 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	ADAM17	P78536	824 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	SOX4	Q06945	474 aa	Predicted RBP	11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	TRIP10	Q15642	601 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	DCAF4L1	Q3SXM0	396 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	PKDCC	Q504Y2	493 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	RABGAP1L	Q5R372	815 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	SLC35F5	Q8WV83	523 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	SAMD11	Q96NU1	681 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	GCNA	Q96QF7	691 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	PRPF18	Q99633	342 aa	Known RBP	11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	NTN4	Q9HB63	628 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	EMCN	Q9ULC0	261 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	INPP5F	Q9Y2H2	1132 aa		11.73	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	CIT	O14578	2027 aa		11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	MAGEA13P	A6NCF6	341 aa		11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	KCNK1	O00180	336 aa		11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	CHAD	O15335	359 aa		11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	GSTT1	P30711	240 aa		11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	GNL1	P36915	607 aa	Predicted RBP	11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	NUMB	P49757	651 aa		11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	KPNA1	P52294	538 aa	Predicted RBP	11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	ACTR3	P61158	418 aa		11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	GSTM4	Q03013	218 aa		11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	TFDP2	Q14188	446 aa		11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	XKR5	Q6UX68	686 aa		11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	BNC2	Q6ZN30	1099 aa	Predicted RBP	11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	ARHGAP24	Q8N264	748 aa		11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	PLD6	Q8N2A8	252 aa	Known RBP	11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	BEST2	Q8NFU1	509 aa		11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	SLC2A14	Q8TDB8	520 aa		11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	PPP2R3C	Q969Q6	453 aa		11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	NMD3	Q96D46	503 aa	Known RBP	11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	CYP3A43	Q9HB55	503 aa		11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	UBP1	Q9NZI7	540 aa		11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	SIRPG	Q9P1W8	387 aa		11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	ZNF212	Q9UDV6	495 aa		11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	GTF2IRD1	Q9UHL9	959 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 15 ms