RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 OR6C4Q8NGE1 309 aa12.48□□□□□ -0.41
TOP3A-215ENST00000583328 OR6K2Q8NGY2 324 aa12.48□□□□□ -0.41
TOP3A-215ENST00000583328 PCDH19Q8TAB3 1148 aa12.48□□□□□ -0.41
TOP3A-215ENST00000583328 USP7Q93009 1102 aa12.48□□□□□ -0.41
TOP3A-215ENST00000583328 ARHGEF26Q96DR7 871 aa12.48□□□□□ -0.41
TOP3A-215ENST00000583328 DHTKD1Q96HY7 919 aaPredicted RBP12.48□□□□□ -0.41
TOP3A-215ENST00000583328 C1QTNF7Q9BXJ2 289 aa12.48□□□□□ -0.41
TOP3A-215ENST00000583328 EDEM3Q9BZQ6 932 aa12.48□□□□□ -0.41
TOP3A-215ENST00000583328 SYNCQ9H7C4 482 aa12.48□□□□□ -0.41
TOP3A-215ENST00000583328 MBNL1Q9NR56 388 aaKnown RBP12.48□□□□□ -0.41
TOP3A-215ENST00000583328 RRN3Q9NYV6 651 aa12.48□□□□□ -0.41
TOP3A-215ENST00000583328 ACTL7AQ9Y615 435 aa12.48□□□□□ -0.41
TOP3A-215ENST00000583328 PPP1R3GB7ZBB8 358 aa12.47□□□□□ -0.41
TOP3A-215ENST00000583328 TM7SF2O76062 418 aa12.47□□□□□ -0.41
TOP3A-215ENST00000583328 F9P00740 461 aa12.47□□□□□ -0.41
TOP3A-215ENST00000583328 ERBB2P04626 1255 aa12.47□□□□□ -0.41
TOP3A-215ENST00000583328 GP1BBP13224 206 aa12.47□□□□□ -0.41
TOP3A-215ENST00000583328 CD44P16070 742 aaKnown RBP12.47□□□□□ -0.41
TOP3A-215ENST00000583328 CXCR3P49682 368 aa12.47□□□□□ -0.41
TOP3A-215ENST00000583328 SULT1E1P49888 294 aa12.47□□□□□ -0.41
TOP3A-215ENST00000583328 HK3P52790 923 aa12.47□□□□□ -0.41
TOP3A-215ENST00000583328 ARF5P84085 180 aa12.47□□□□□ -0.41
TOP3A-215ENST00000583328 GNA12Q03113 381 aa12.47□□□□□ -0.41
TOP3A-215ENST00000583328 CLCA4Q14CN2 919 aa12.47□□□□□ -0.41
TOP3A-215ENST00000583328 NFKBIBQ15653 356 aa12.47□□□□□ -0.41
TOP3A-215ENST00000583328 ACBD5Q5T8D3 534 aaPredicted RBP12.47□□□□□ -0.41
TOP3A-215ENST00000583328 ENOSF1Q7L5Y1 443 aa12.47□□□□□ -0.41
TOP3A-215ENST00000583328 SLC26A9Q7LBE3 791 aa12.47□□□□□ -0.41
TOP3A-215ENST00000583328 RD3Q7Z3Z2 195 aa12.47□□□□□ -0.41
TOP3A-215ENST00000583328 TTC7BQ86TV6 843 aa12.47□□□□□ -0.41
TOP3A-215ENST00000583328 PTRH1Q86Y79 214 aaKnown RBP12.47□□□□□ -0.41
TOP3A-215ENST00000583328 PLPP6Q8IY26 295 aa12.47□□□□□ -0.41
TOP3A-215ENST00000583328 CXorf40AQ8TE69 158 aa12.47□□□□□ -0.41
TOP3A-215ENST00000583328 HTR3CQ8WXA8 447 aa12.47□□□□□ -0.41
TOP3A-215ENST00000583328 TSACCQ96A04 125 aaPredicted RBP12.47□□□□□ -0.41
TOP3A-215ENST00000583328 TMEM159Q96B96 161 aa12.47□□□□□ -0.41
TOP3A-215ENST00000583328 C1orf74Q96LT6 269 aa12.47□□□□□ -0.41
TOP3A-215ENST00000583328 NPY6RQ99463 290 aa12.47□□□□□ -0.41
TOP3A-215ENST00000583328 CMKLR1Q99788 373 aa12.47□□□□□ -0.41
TOP3A-215ENST00000583328 EPAS1Q99814 870 aa12.47□□□□□ -0.41
TOP3A-215ENST00000583328 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.47□□□□□ -0.41
TOP3A-215ENST00000583328 STAP1Q9ULZ2 295 aa12.47□□□□□ -0.41
TOP3A-215ENST00000583328 PAXBP1Q9Y5B6 917 aa12.47□□□□□ -0.41
TOP3A-215ENST00000583328 COL27A1Q8IZC6 1860 aaPredicted RBP12.46□□□□□ -0.41
TOP3A-215ENST00000583328 IGLV3-10A0A075B6K4 115 aa12.46□□□□□ -0.41
TOP3A-215ENST00000583328 A0A1W2PQC6 194 aa12.46□□□□□ -0.41
TOP3A-215ENST00000583328 I6L893 689 aaPredicted RBP12.46□□□□□ -0.41
TOP3A-215ENST00000583328 KRIT1O00522 736 aa12.46□□□□□ -0.41
TOP3A-215ENST00000583328 RASGRP1O95267 797 aa12.46□□□□□ -0.41
TOP3A-215ENST00000583328 UGT2B4P06133 528 aa12.46□□□□□ -0.41
TOP3A-215ENST00000583328 TFE3P19532 575 aaPredicted RBP12.46□□□□□ -0.41
TOP3A-215ENST00000583328 WT1P19544 449 aaPredicted RBP12.46□□□□□ -0.41
TOP3A-215ENST00000583328 ETV5P41161 510 aa12.46□□□□□ -0.41
TOP3A-215ENST00000583328 POLD3Q15054 466 aaPredicted RBP12.46□□□□□ -0.41
TOP3A-215ENST00000583328 ARHGAP44Q17R89 818 aa12.46□□□□□ -0.41
TOP3A-215ENST00000583328 OTUD1Q5VV17 481 aaPredicted RBP12.46□□□□□ -0.41
TOP3A-215ENST00000583328 KLHL10Q6JEL2 608 aa12.46□□□□□ -0.41
TOP3A-215ENST00000583328 FOXR2Q6PJQ5 311 aa12.46□□□□□ -0.41
TOP3A-215ENST00000583328 ENPP7Q6UWV6 458 aa12.46□□□□□ -0.41
TOP3A-215ENST00000583328 CCNJLQ8IV13 435 aa12.46□□□□□ -0.41
TOP3A-215ENST00000583328 DRC7Q8IY82 874 aa12.46□□□□□ -0.41
TOP3A-215ENST00000583328 MLKLQ8NB16 471 aa12.46□□□□□ -0.41
TOP3A-215ENST00000583328 C1orf131Q8NDD1 294 aaKnown RBP12.46□□□□□ -0.41
TOP3A-215ENST00000583328 ZNF397Q8NF99 534 aaPredicted RBP12.46□□□□□ -0.41
TOP3A-215ENST00000583328 ISG20Q96AZ6 181 aaKnown RBP12.46□□□□□ -0.41
TOP3A-215ENST00000583328 KLHL32Q96NJ5 620 aa12.46□□□□□ -0.41
TOP3A-215ENST00000583328 TMPRSS4Q9NRS4 437 aa12.46□□□□□ -0.41
TOP3A-215ENST00000583328 FOXJ2Q9P0K8 574 aa12.46□□□□□ -0.41
TOP3A-215ENST00000583328 DACH1Q9UI36 760 aa12.46□□□□□ -0.41
TOP3A-215ENST00000583328 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.46□□□□□ -0.41
TOP3A-215ENST00000583328 TLN1Q9Y490 2541 aaKnown RBP12.46□□□□□ -0.42
TOP3A-215ENST00000583328 BICDL2A1A5D9 508 aa12.45□□□□□ -0.42
TOP3A-215ENST00000583328 TMEM110-MUSTN1A8MSY1 372 aa12.45□□□□□ -0.42
TOP3A-215ENST00000583328 AREL1O15033 823 aa12.45□□□□□ -0.42
TOP3A-215ENST00000583328 POP4O95707 220 aaKnown RBP12.45□□□□□ -0.42
TOP3A-215ENST00000583328 GNA14O95837 355 aa12.45□□□□□ -0.42
TOP3A-215ENST00000583328 CD160O95971 181 aa12.45□□□□□ -0.42
TOP3A-215ENST00000583328 CD82P27701 267 aa12.45□□□□□ -0.42
TOP3A-215ENST00000583328 HTR1BP28222 390 aa12.45□□□□□ -0.42
TOP3A-215ENST00000583328 KRT9P35527 623 aa12.45□□□□□ -0.42
TOP3A-215ENST00000583328 PEX5P50542 639 aa12.45□□□□□ -0.42
TOP3A-215ENST00000583328 SNRPD1P62314 119 aaKnown RBP12.45□□□□□ -0.42
TOP3A-215ENST00000583328 ZFP36L1Q07352 338 aaKnown RBP12.45□□□□□ -0.42
TOP3A-215ENST00000583328 PAK1Q13153 545 aa12.45□□□□□ -0.42
TOP3A-215ENST00000583328 SKIDA1Q1XH10 827 aa12.45□□□□□ -0.42
TOP3A-215ENST00000583328 ALG11Q2TAA5 492 aa12.45□□□□□ -0.42
TOP3A-215ENST00000583328 MYLK3Q32MK0 819 aa12.45□□□□□ -0.42
TOP3A-215ENST00000583328 PTPN20Q4JDL3 420 aa12.45□□□□□ -0.42
TOP3A-215ENST00000583328 LRRC73Q5JTD7 316 aa12.45□□□□□ -0.42
TOP3A-215ENST00000583328 TMEM164Q5U3C3 297 aa12.45□□□□□ -0.42
TOP3A-215ENST00000583328 GJB7Q6PEY0 223 aa12.45□□□□□ -0.42
TOP3A-215ENST00000583328 SASS6Q6UVJ0 657 aa12.45□□□□□ -0.42
TOP3A-215ENST00000583328 DTX1Q86Y01 620 aa12.45□□□□□ -0.42
TOP3A-215ENST00000583328 TRIM59Q8IWR1 403 aa12.45□□□□□ -0.42
TOP3A-215ENST00000583328 TP53I13Q8NBR0 393 aaPredicted RBP12.45□□□□□ -0.42
TOP3A-215ENST00000583328 ZNF564Q8TBZ8 553 aaPredicted RBP12.45□□□□□ -0.42
TOP3A-215ENST00000583328 NELFBQ8WX92 580 aa12.45□□□□□ -0.42
TOP3A-215ENST00000583328 JPH3Q8WXH2 748 aaPredicted RBP12.45□□□□□ -0.42
TOP3A-215ENST00000583328 FAM81BQ96LP2 452 aa12.45□□□□□ -0.42
TOP3A-215ENST00000583328 TBCBQ99426 244 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms