RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 TIMM44O43615 452 aa9.39□□□□□ -0.91
SS18-220ENST00000582092 CACNG3O60359 315 aa9.39□□□□□ -0.91
SS18-220ENST00000582092 CREB1P16220 341 aa9.39□□□□□ -0.91
SS18-220ENST00000582092 TYK2P29597 1187 aa9.39□□□□□ -0.91
SS18-220ENST00000582092 RPA3P35244 121 aaPredicted RBP9.39□□□□□ -0.91
SS18-220ENST00000582092 ACVRL1P37023 503 aa9.39□□□□□ -0.91
SS18-220ENST00000582092 SLC12A2P55011 1212 aa9.39□□□□□ -0.91
SS18-220ENST00000582092 DSC2Q02487 901 aa9.39□□□□□ -0.91
SS18-220ENST00000582092 ILF2Q12905 390 aaKnown RBP9.39□□□□□ -0.91
SS18-220ENST00000582092 TDGQ13569 410 aa9.39□□□□□ -0.91
SS18-220ENST00000582092 FRG1Q14331 258 aaKnown RBP9.39□□□□□ -0.91
SS18-220ENST00000582092 FAM133BQ5BKY9 247 aaKnown RBP9.39□□□□□ -0.91
SS18-220ENST00000582092 GPR158Q5T848 1215 aa9.39□□□□□ -0.91
SS18-220ENST00000582092 RNF187Q5TA31 235 aaPredicted RBP9.39□□□□□ -0.91
SS18-220ENST00000582092 FYB2Q5VWT5 728 aa9.39□□□□□ -0.91
SS18-220ENST00000582092 TRMT10BQ6PF06 316 aaKnown RBP9.39□□□□□ -0.91
SS18-220ENST00000582092 PACS1Q6VY07 963 aa9.39□□□□□ -0.91
SS18-220ENST00000582092 MTSS1LQ765P7 747 aa9.39□□□□□ -0.91
SS18-220ENST00000582092 GRASPQ7Z6J2 395 aaPredicted RBP9.39□□□□□ -0.91
SS18-220ENST00000582092 TMEM135Q86UB9 458 aa9.39□□□□□ -0.91
SS18-220ENST00000582092 MFN1Q8IWA4 741 aa9.39□□□□□ -0.91
SS18-220ENST00000582092 HS6ST3Q8IZP7 471 aa9.39□□□□□ -0.91
SS18-220ENST00000582092 NDUFAF2Q8N183 169 aa9.39□□□□□ -0.91
SS18-220ENST00000582092 TEX26Q8N6G2 289 aa9.39□□□□□ -0.91
SS18-220ENST00000582092 OR7D4Q8NG98 312 aa9.39□□□□□ -0.91
SS18-220ENST00000582092 ACMSDQ8TDX5 336 aa9.39□□□□□ -0.91
SS18-220ENST00000582092 PTPRN2Q92932 1015 aa9.39□□□□□ -0.91
SS18-220ENST00000582092 ZNF707Q96C28 371 aaPredicted RBP9.39□□□□□ -0.91
SS18-220ENST00000582092 IMP4Q96G21 291 aaKnown RBP9.39□□□□□ -0.91
SS18-220ENST00000582092 KLF6Q99612 283 aaPredicted RBP9.39□□□□□ -0.91
SS18-220ENST00000582092 PLCD4Q9BRC7 762 aa9.39□□□□□ -0.91
SS18-220ENST00000582092 FAM167BQ9BTA0 163 aa9.39□□□□□ -0.91
SS18-220ENST00000582092 KIFC1Q9BW19 673 aa9.39□□□□□ -0.91
SS18-220ENST00000582092 PITPNM3Q9BZ71 974 aa9.39□□□□□ -0.91
SS18-220ENST00000582092 KCNH6Q9H252 994 aa9.39□□□□□ -0.91
SS18-220ENST00000582092 MFSD1Q9H3U5 465 aa9.39□□□□□ -0.91
SS18-220ENST00000582092 CCDC134Q9H6E4 229 aa9.39□□□□□ -0.91
SS18-220ENST00000582092 NOL6Q9H6R4 1146 aaKnown RBP9.39□□□□□ -0.91
SS18-220ENST00000582092 MRM3Q9HC36 420 aaKnown RBP9.39□□□□□ -0.91
SS18-220ENST00000582092 CHRAC1Q9NRG0 131 aa9.39□□□□□ -0.91
SS18-220ENST00000582092 IARS2Q9NSE4 1012 aaKnown RBP9.39□□□□□ -0.91
SS18-220ENST00000582092 EURLQ9NYK6 297 aa9.39□□□□□ -0.91
SS18-220ENST00000582092 DCDC2Q9UHG0 476 aa9.39□□□□□ -0.91
SS18-220ENST00000582092 ZMYM5Q9UJ78 669 aa9.39□□□□□ -0.91
SS18-220ENST00000582092 CDH22Q9UJ99 828 aa9.39□□□□□ -0.91
SS18-220ENST00000582092 VPS28Q9UK41 221 aa9.39□□□□□ -0.91
SS18-220ENST00000582092 TLK1Q9UKI8 766 aa9.39□□□□□ -0.91
SS18-220ENST00000582092 ARIH1Q9Y4X5 557 aaPredicted RBP9.39□□□□□ -0.91
SS18-220ENST00000582092 XIRP2A4UGR9 3374 aa9.38□□□□□ -0.91
SS18-220ENST00000582092 A0A0D9SEW6 157 aa9.38□□□□□ -0.91
SS18-220ENST00000582092 CCDC78A2IDD5 438 aa9.38□□□□□ -0.91
SS18-220ENST00000582092 WDR91A4D1P6 747 aa9.38□□□□□ -0.91
SS18-220ENST00000582092 FAM155BO75949 473 aa9.38□□□□□ -0.91
SS18-220ENST00000582092 LUC7L3O95232 432 aaKnown RBP9.38□□□□□ -0.91
SS18-220ENST00000582092 KLKB1P03952 638 aa9.38□□□□□ -0.91
SS18-220ENST00000582092 MPOP05164 745 aa9.38□□□□□ -0.91
SS18-220ENST00000582092 FGF1P05230 155 aa9.38□□□□□ -0.91
SS18-220ENST00000582092 LAMP2P13473 410 aa9.38□□□□□ -0.91
SS18-220ENST00000582092 HLA-DPA1P20036 260 aa9.38□□□□□ -0.91
SS18-220ENST00000582092 ALDH3A1P30838 453 aa9.38□□□□□ -0.91
SS18-220ENST00000582092 SERPINB8P50452 374 aa9.38□□□□□ -0.91
SS18-220ENST00000582092 SCNN1BP51168 640 aa9.38□□□□□ -0.91
SS18-220ENST00000582092 CSE1LP55060 971 aaKnown RBP9.38□□□□□ -0.91
SS18-220ENST00000582092 PRAMEP78395 509 aa9.38□□□□□ -0.91
SS18-220ENST00000582092 SLC7A9P82251 487 aa9.38□□□□□ -0.91
SS18-220ENST00000582092 SLC18A2Q05940 514 aa9.38□□□□□ -0.91
SS18-220ENST00000582092 CDK18Q07002 472 aa9.38□□□□□ -0.91
SS18-220ENST00000582092 OLIG2Q13516 323 aa9.38□□□□□ -0.91
SS18-220ENST00000582092 BMPR2Q13873 1038 aa9.38□□□□□ -0.91
SS18-220ENST00000582092 HSP90AA5PQ58FG0 334 aa9.38□□□□□ -0.91
SS18-220ENST00000582092 ATG16L1Q676U5 607 aa9.38□□□□□ -0.91
SS18-220ENST00000582092 RETSATQ6NUM9 610 aa9.38□□□□□ -0.91
SS18-220ENST00000582092 TIFABQ6ZNK6 161 aa9.38□□□□□ -0.91
SS18-220ENST00000582092 CCDC121Q6ZUS5 278 aa9.38□□□□□ -0.91
SS18-220ENST00000582092 METTL3Q86U44 580 aaKnown RBP9.38□□□□□ -0.91
SS18-220ENST00000582092 LRRC34Q8IZ02 419 aa9.38□□□□□ -0.91
SS18-220ENST00000582092 AGGF1Q8N302 714 aaeCLIP9.38□□□□□ -0.91
SS18-220ENST00000582092 BANPQ8N9N5 519 aa9.38□□□□□ -0.91
SS18-220ENST00000582092 ZSCAN18Q8TBC5 510 aaPredicted RBP9.38□□□□□ -0.91
SS18-220ENST00000582092 TCP10LQ8TDR4 215 aa9.38□□□□□ -0.91
SS18-220ENST00000582092 USP13Q92995 863 aaPredicted RBP9.38□□□□□ -0.91
SS18-220ENST00000582092 RMDN1Q96DB5 314 aa9.38□□□□□ -0.91
SS18-220ENST00000582092 FEM1CQ96JP0 617 aa9.38□□□□□ -0.91
SS18-220ENST00000582092 MRGPRX2Q96LB1 330 aa9.38□□□□□ -0.91
SS18-220ENST00000582092 ELAC2Q9BQ52 826 aaKnown RBP9.38□□□□□ -0.91
SS18-220ENST00000582092 GORASP1Q9BQQ3 440 aa9.38□□□□□ -0.91
SS18-220ENST00000582092 C2orf49Q9BVC5 232 aaPredicted RBP9.38□□□□□ -0.91
SS18-220ENST00000582092 ADGRE3Q9BY15 652 aa9.38□□□□□ -0.91
SS18-220ENST00000582092 KIF9Q9HAQ2 790 aa9.38□□□□□ -0.91
SS18-220ENST00000582092 KCNK12Q9HB15 430 aa9.38□□□□□ -0.91
SS18-220ENST00000582092 PCMTD2Q9NV79 361 aa9.38□□□□□ -0.91
SS18-220ENST00000582092 KIAA1522Q9P206 1035 aaPredicted RBP9.38□□□□□ -0.91
SS18-220ENST00000582092 EPS15L1Q9UBC2 864 aa9.38□□□□□ -0.91
SS18-220ENST00000582092 FBXL21Q9UKT6 434 aa9.38□□□□□ -0.91
SS18-220ENST00000582092 CDH7Q9ULB5 785 aa9.38□□□□□ -0.91
SS18-220ENST00000582092 GRID1Q9ULK0 1009 aa9.38□□□□□ -0.91
SS18-220ENST00000582092 MRPS23Q9Y3D9 190 aaKnown RBP9.38□□□□□ -0.91
SS18-220ENST00000582092 TCAF1Q9Y4C2 921 aa9.38□□□□□ -0.91
SS18-220ENST00000582092 PFDN6O15212 129 aa9.37□□□□□ -0.91
SS18-220ENST00000582092 TYROBPO43914 113 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms