RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 SAP25Q8TEE9 199 aa19.73■□□□□ 0.75
SREBF1-220ENST00000581707 CCDC42Q96M95 316 aa19.73■□□□□ 0.75
SREBF1-220ENST00000581707 CINPQ9BW66 212 aaPredicted RBP19.73■□□□□ 0.75
SREBF1-220ENST00000581707 C1QTNF2Q9BXJ5 285 aa19.73■□□□□ 0.75
SREBF1-220ENST00000581707 SUV39H2Q9H5I1 410 aa19.73■□□□□ 0.75
SREBF1-220ENST00000581707 HS3ST3A1Q9Y663 406 aa19.73■□□□□ 0.75
SREBF1-220ENST00000581707 EPG5Q9HCE0 2579 aa19.73■□□□□ 0.75
SREBF1-220ENST00000581707 PROSCO94903 275 aa19.72■□□□□ 0.75
SREBF1-220ENST00000581707 PIGNO95427 931 aa19.72■□□□□ 0.75
SREBF1-220ENST00000581707 EPHA8P29322 1005 aaPredicted RBP19.72■□□□□ 0.75
SREBF1-220ENST00000581707 MAP1BP46821 2468 aaKnown RBP19.72■□□□□ 0.75
SREBF1-220ENST00000581707 CSNK1DP48730 415 aa19.72■□□□□ 0.75
SREBF1-220ENST00000581707 CDH6P55285 790 aa19.72■□□□□ 0.75
SREBF1-220ENST00000581707 BNIP3Q12983 259 aa19.72■□□□□ 0.75
SREBF1-220ENST00000581707 LRRC73Q5JTD7 316 aa19.72■□□□□ 0.75
SREBF1-220ENST00000581707 SARM1Q6SZW1 724 aa19.72■□□□□ 0.75
SREBF1-220ENST00000581707 GCNT7Q6ZNI0 430 aa19.72■□□□□ 0.75
SREBF1-220ENST00000581707 RAB44Q7Z6P3 723 aaPredicted RBP19.72■□□□□ 0.75
SREBF1-220ENST00000581707 ABI3BPQ7Z7G0 1075 aa19.72■□□□□ 0.75
SREBF1-220ENST00000581707 SRLQ86TD4 932 aa19.72■□□□□ 0.75
SREBF1-220ENST00000581707 SLCO6A1Q86UG4 719 aa19.72■□□□□ 0.75
SREBF1-220ENST00000581707 CNGA4Q8IV77 575 aa19.72■□□□□ 0.75
SREBF1-220ENST00000581707 CHCHD4Q8N4Q1 142 aa19.72■□□□□ 0.75
SREBF1-220ENST00000581707 PNPLA1Q8N8W4 532 aa19.72■□□□□ 0.75
SREBF1-220ENST00000581707 HCAR2Q8TDS4 363 aa19.72■□□□□ 0.75
SREBF1-220ENST00000581707 ASB12Q8WXK4 309 aa19.72■□□□□ 0.75
SREBF1-220ENST00000581707 TSC1Q92574 1164 aa19.72■□□□□ 0.75
SREBF1-220ENST00000581707 BMFQ96LC9 184 aa19.72■□□□□ 0.75
SREBF1-220ENST00000581707 ZNF641Q96N77 438 aaPredicted RBP19.72■□□□□ 0.75
SREBF1-220ENST00000581707 LENG8Q96PV6 779 aaPredicted RBP19.72■□□□□ 0.75
SREBF1-220ENST00000581707 NHEJ1Q9H9Q4 299 aaPredicted RBP19.72■□□□□ 0.75
SREBF1-220ENST00000581707 RCOR3Q9P2K3 495 aaPredicted RBP19.72■□□□□ 0.75
SREBF1-220ENST00000581707 LCMT1Q9UIC8 334 aa19.72■□□□□ 0.75
SREBF1-220ENST00000581707 A6NNZ2 444 aa19.71■□□□□ 0.75
SREBF1-220ENST00000581707 AKR1B15C9JRZ8 316 aaPredicted RBP19.71■□□□□ 0.75
SREBF1-220ENST00000581707 RAD51BO15315 384 aa19.71■□□□□ 0.75
SREBF1-220ENST00000581707 TNFSF14O43557 240 aa19.71■□□□□ 0.75
SREBF1-220ENST00000581707 BUB1BO60566 1050 aaPredicted RBP19.71■□□□□ 0.75
SREBF1-220ENST00000581707 ATXN1LP0C7T5 689 aaKnown RBP19.71■□□□□ 0.75
SREBF1-220ENST00000581707 TMEM253P0C7T8 217 aa19.71■□□□□ 0.75
SREBF1-220ENST00000581707 ITIH2P19823 946 aa19.71■□□□□ 0.75
SREBF1-220ENST00000581707 XPAP23025 273 aaPredicted RBP19.71■□□□□ 0.75
SREBF1-220ENST00000581707 RGRP47804 291 aa19.71■□□□□ 0.75
SREBF1-220ENST00000581707 SUOXP51687 545 aa19.71■□□□□ 0.75
SREBF1-220ENST00000581707 NSUN2Q08J23 767 aaKnown RBP eCLIP19.71■□□□□ 0.75
SREBF1-220ENST00000581707 TBX2Q13207 712 aaPredicted RBP19.71■□□□□ 0.75
SREBF1-220ENST00000581707 Q6ZSR6 202 aa19.71■□□□□ 0.75
SREBF1-220ENST00000581707 CPNE8Q86YQ8 564 aa19.71■□□□□ 0.75
SREBF1-220ENST00000581707 ADAMTS14Q8WXS8 1223 aa19.71■□□□□ 0.75
SREBF1-220ENST00000581707 ZNF599Q96NL3 588 aa19.71■□□□□ 0.75
SREBF1-220ENST00000581707 TUBGCP5Q96RT8 1024 aa19.71■□□□□ 0.75
SREBF1-220ENST00000581707 CALN1Q9BXU9 219 aa19.71■□□□□ 0.75
SREBF1-220ENST00000581707 TRIM5Q9C035 493 aa19.71■□□□□ 0.75
SREBF1-220ENST00000581707 SPTLC3Q9NUV7 552 aa19.71■□□□□ 0.75
SREBF1-220ENST00000581707 KLHL11Q9NVR0 708 aa19.71■□□□□ 0.75
SREBF1-220ENST00000581707 FTSJ1Q9UET6 329 aa19.71■□□□□ 0.75
SREBF1-220ENST00000581707 SEPT3Q9UH03 358 aa19.71■□□□□ 0.75
SREBF1-220ENST00000581707 SPEGQ15772 3267 aa19.7■□□□□ 0.74
SREBF1-220ENST00000581707 POM121BA6NF01 834 aa19.7■□□□□ 0.74
SREBF1-220ENST00000581707 GOLGA8CPA6NN73 597 aa19.7■□□□□ 0.74
SREBF1-220ENST00000581707 IL4RP24394 825 aa19.7■□□□□ 0.74
SREBF1-220ENST00000581707 SERPINB6P35237 376 aa19.7■□□□□ 0.74
SREBF1-220ENST00000581707 RENBPP51606 427 aa19.7■□□□□ 0.74
SREBF1-220ENST00000581707 LBRQ14739 615 aaKnown RBP19.7■□□□□ 0.74
SREBF1-220ENST00000581707 ATP13A4Q4VNC1 1196 aa19.7■□□□□ 0.74
SREBF1-220ENST00000581707 CFAP58Q5T655 872 aa19.7■□□□□ 0.74
SREBF1-220ENST00000581707 TMCO4Q5TGY1 634 aa19.7■□□□□ 0.74
SREBF1-220ENST00000581707 PTAR1Q7Z6K3 402 aaPredicted RBP19.7■□□□□ 0.74
SREBF1-220ENST00000581707 DCP2Q8IU60 420 aaKnown RBP19.7■□□□□ 0.74
SREBF1-220ENST00000581707 CAMK1DQ8IU85 385 aa19.7■□□□□ 0.74
SREBF1-220ENST00000581707 FAM71BQ8TC56 605 aa19.7■□□□□ 0.74
SREBF1-220ENST00000581707 CXorf40AQ8TE69 158 aa19.7■□□□□ 0.74
SREBF1-220ENST00000581707 KLF6Q99612 283 aaPredicted RBP19.7■□□□□ 0.74
SREBF1-220ENST00000581707 ATP13A3Q9H7F0 1226 aa19.7■□□□□ 0.74
SREBF1-220ENST00000581707 TOR4AQ9NXH8 423 aa19.7■□□□□ 0.74
SREBF1-220ENST00000581707 NEUROG3Q9Y4Z2 214 aa19.7■□□□□ 0.74
SREBF1-220ENST00000581707 TDRD6O60522 2096 aaKnown RBP19.7■□□□□ 0.74
SREBF1-220ENST00000581707 ANKRD36A6QL64 1941 aa19.7■□□□□ 0.74
SREBF1-220ENST00000581707 AKAP13Q12802 2813 aa19.7■□□□□ 0.74
SREBF1-220ENST00000581707 ARID1BQ8NFD5 2236 aaPredicted RBP19.7■□□□□ 0.74
SREBF1-220ENST00000581707 TSPAN11A1L157 253 aa19.69■□□□□ 0.74
SREBF1-220ENST00000581707 FPGTO14772 594 aa19.69■□□□□ 0.74
SREBF1-220ENST00000581707 MMP20O60882 483 aa19.69■□□□□ 0.74
SREBF1-220ENST00000581707 CD48P09326 243 aa19.69■□□□□ 0.74
SREBF1-220ENST00000581707 SERPINA4P29622 427 aa19.69■□□□□ 0.74
SREBF1-220ENST00000581707 GJC1P36383 396 aa19.69■□□□□ 0.74
SREBF1-220ENST00000581707 ARSEP51690 589 aa19.69■□□□□ 0.74
SREBF1-220ENST00000581707 SLC10A7Q0GE19 358 aa19.69■□□□□ 0.74
SREBF1-220ENST00000581707 ELP6Q0PNE2 266 aa19.69■□□□□ 0.74
SREBF1-220ENST00000581707 MMRN1Q13201 1228 aa19.69■□□□□ 0.74
SREBF1-220ENST00000581707 UGP2Q16851 508 aa19.69■□□□□ 0.74
SREBF1-220ENST00000581707 BRAT1Q6PJG6 821 aa19.69■□□□□ 0.74
SREBF1-220ENST00000581707 KYAT3Q6YP21 454 aaKnown RBP19.69■□□□□ 0.74
SREBF1-220ENST00000581707 KANSL1Q7Z3B3 1105 aa19.69■□□□□ 0.74
SREBF1-220ENST00000581707 EID2Q8N6I1 236 aa19.69■□□□□ 0.74
SREBF1-220ENST00000581707 KCTD6Q8NC69 237 aa19.69■□□□□ 0.74
SREBF1-220ENST00000581707 DENND6BQ8NEG7 585 aa19.69■□□□□ 0.74
SREBF1-220ENST00000581707 SLC35G2Q8TBE7 412 aa19.69■□□□□ 0.74
SREBF1-220ENST00000581707 PSKH2Q96QS6 385 aa19.69■□□□□ 0.74
SREBF1-220ENST00000581707 KLK13Q9UKR3 277 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms