RNA–Protein interactions for RNA: ENST00000581224.5

TRIM16-222, Transcript of tripartite motif containing 16, human

TSL 3

Gene TRIM16, Length 815 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM16-222	ENST00000581224	YBX2	Q9Y2T7	364 aa	Known RBP	10.03	□□□□□ -0.8
TRIM16-222	ENST00000581224		A0A1W2PQ67	120 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	C2orf81	A6NN90	581 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	CBX4	O00257	560 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	DCTN3	O75935	186 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	CA3	P07451	260 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	LINC00271	P0C7V0	271 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	ERVK-10	P10266	1014 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	MYL4	P12829	197 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	TPH1	P17752	444 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	NFKBIA	P25963	317 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	HOXD9	P28356	352 aa	Predicted RBP	10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	ACVRL1	P37023	503 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	PPARG	P37231	505 aa	Predicted RBP	10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	CLCN4	P51793	760 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	PLK1	P53350	603 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	AP1S1	P61966	158 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	PRAME	P78395	509 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	POU4F1	Q01851	419 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	SULT2A1	Q06520	285 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	GRM3	Q14832	879 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	SETDB1	Q15047	1291 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	PCSK7	Q16549	785 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	TSNAXIP1	Q2TAA8	658 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	TSTD2	Q5T7W7	516 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	TXNDC8	Q6A555	127 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	MRNIP	Q6NTE8	343 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	NEPRO	Q6NW34	567 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	TMC8	Q8IU68	726 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	NUDCD3	Q8IVD9	361 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	KIRREL3	Q8IZU9	778 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	CARNMT1	Q8N4J0	409 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	MAB21L3	Q8N8X9	362 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	TDRD5	Q8NAT2	981 aa	Known RBP	10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	FIBIN	Q8TAL6	211 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	DDI1	Q8WTU0	396 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	STYX	Q8WUJ0	223 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	PPP2R3C	Q969Q6	453 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	MFSD3	Q96ES6	412 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	SERAC1	Q96JX3	654 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	ZFR	Q96KR1	1074 aa	Known RBP	10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	FCRL3	Q96P31	734 aa	Predicted RBP	10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	TCF12	Q99081	682 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	ELAC2	Q9BQ52	826 aa	Known RBP	10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	CORO1B	Q9BR76	489 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	FEM1A	Q9BSK4	669 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	SLC2A11	Q9BYW1	496 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	ZNF576	Q9H609	170 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	ACTR5	Q9H9F9	607 aa	Predicted RBP	10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	CERS4	Q9HA82	394 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	KIF9	Q9HAQ2	790 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	ZNF334	Q9HCZ1	680 aa	Predicted RBP	10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	TREX1	Q9NSU2	369 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	SMPD4	Q9NXE4	827 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	VPS28	Q9UK41	221 aa		10.02	□□□□□ -0.81
TRIM16-222	ENST00000581224	MYO9B	Q13459	2157 aa		10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224		A0A087X1B8	175 aa		10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224	LINC01553	A4QN01	128 aa		10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224	MROH6	A6NGR9	719 aa		10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224	GOLGA8CP	A6NN73	597 aa		10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224	GOLGA8R	I6L899	631 aa		10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224	GFRA2	O00451	464 aa		10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224	TSPAN3	O60637	253 aa		10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224	EDF1	O60869	148 aa	Known RBP	10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224	ATP5H	O75947	161 aa		10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224	VAPB	O95292	243 aa		10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224	MMP2	P08253	660 aa		10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224	SPATA31D3	P0C874	917 aa		10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224	NMBR	P28336	390 aa		10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224	WEE1	P30291	646 aa		10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224	SLC26A3	P40879	764 aa		10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224	ETV4	P43268	484 aa		10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224	MAGEA12	P43365	314 aa		10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224	CD151	P48509	253 aa		10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224	SERPINB4	P48594	390 aa		10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224	CLCN5	P51795	746 aa		10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224	ERVFC1	P60507	584 aa		10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224	DSC2	Q02487	901 aa		10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224	ACVR1	Q04771	509 aa		10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224	SEPT6	Q14141	434 aa		10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224	SIRPB2	Q5JXA9	342 aa		10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224	SPDYA	Q5MJ70	313 aa		10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224	PLPP4	Q5VZY2	271 aa		10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224	RNF43	Q68DV7	783 aa		10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224	FSTL4	Q6MZW2	842 aa		10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224	GPR153	Q6NV75	609 aa		10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224	SPATA31D4	Q6ZUB0	917 aa		10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224	GAREM2	Q75VX8	874 aa		10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224	CIR1	Q86X95	450 aa	Predicted RBP	10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224	MFN1	Q8IWA4	741 aa		10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224	CMTM8	Q8IZV2	173 aa		10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224	PIAS4	Q8N2W9	510 aa	Predicted RBP	10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224	EFHB	Q8N7U6	833 aa		10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224	C2CD4A	Q8NCU7	369 aa	Predicted RBP	10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224	OR7D4	Q8NG98	312 aa		10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224	PPP1R14C	Q8TAE6	165 aa		10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224	ISG20	Q96AZ6	181 aa	Known RBP	10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224	PRICKLE1	Q96MT3	831 aa	Predicted RBP	10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224	FAM111A	Q96PZ2	611 aa		10.01	□□□□□ -0.81
TRIM16-222	ENST00000581224	TTC1	Q99614	292 aa		10.01	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms