RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 ANTXRLA6NF34 631 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 FAM187AA6NFU0 413 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 TRAFD1O14545 582 aaPredicted RBP10.51□□□□□ -0.73
CCDC47-203ENST00000580986 PSMD3O43242 534 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 FZD6O60353 706 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 APBB3O95704 486 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 DCNP07585 359 aaKnown RBP10.51□□□□□ -0.73
CCDC47-203ENST00000580986 MMP2P08253 660 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 CTAGE8P0CG41 777 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 NFKB1P19838 968 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 ITGB7P26010 798 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 PTGIRP43119 386 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 MAGEA6P43360 314 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 KCNJ1P48048 391 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 CXCL12P48061 93 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 NUMBP49757 651 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 SCNN1BP51168 640 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 GEMP55040 296 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 MAXP61244 160 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 TUBB4BP68371 445 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 SKOR1P84550 965 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 DR1Q01658 176 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 SATB1Q01826 763 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 BCL2L1Q07817 233 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 NIPAL4Q0D2K0 466 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 SEMA5AQ13591 1074 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 PTK6Q13882 451 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 PRPSAP1Q14558 356 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 CST6Q15828 149 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 GLE1Q53GS7 698 aaKnown RBP10.51□□□□□ -0.73
CCDC47-203ENST00000580986 ZNF805Q5CZA5 627 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 DNTTIP2Q5QJE6 756 aaKnown RBP10.51□□□□□ -0.73
CCDC47-203ENST00000580986 KCTD11Q693B1 232 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 KIAA1211LQ6NV74 962 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 USP30Q70CQ3 517 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 GSTA5Q7RTV2 222 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 PRPF39Q86UA1 669 aaKnown RBP10.51□□□□□ -0.73
CCDC47-203ENST00000580986 CTAGE6Q86UF2 777 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 KBTBD6Q86V97 674 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 CTAGE4Q8IX94 777 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 STK40Q8N2I9 435 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 MMGT1Q8N4V1 131 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 CCDC110Q8TBZ0 833 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 LRRN4Q8WUT4 740 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 RAB7BQ96AH8 199 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 LRRC45Q96CN5 670 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 EXOC2Q96KP1 924 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 MRGPRX1Q96LB2 322 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 C1QTNF1Q9BXJ1 281 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 TDRD1Q9BXT4 1180 aaKnown RBP10.51□□□□□ -0.73
CCDC47-203ENST00000580986 HDAC8Q9BY41 377 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 FAM126AQ9BYI3 521 aaPredicted RBP10.51□□□□□ -0.73
CCDC47-203ENST00000580986 MKRN2Q9H000 416 aaKnown RBP10.51□□□□□ -0.73
CCDC47-203ENST00000580986 NOD2Q9HC29 1040 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 RSPH14Q9UHP6 348 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 EVLQ9UI08 416 aaPredicted RBP10.51□□□□□ -0.73
CCDC47-203ENST00000580986 FBXO4Q9UKT5 387 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 FZD4Q9ULV1 537 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 PPIL1Q9Y3C6 166 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 SMAPO00193 183 aa10.5□□□□□ -0.73
CCDC47-203ENST00000580986 AP3B1O00203 1094 aa10.5□□□□□ -0.73
CCDC47-203ENST00000580986 SLC7A4O43246 635 aa10.5□□□□□ -0.73
CCDC47-203ENST00000580986 PI15O43692 258 aa10.5□□□□□ -0.73
CCDC47-203ENST00000580986 ZNF217O75362 1048 aa10.5□□□□□ -0.73
CCDC47-203ENST00000580986 LEFTY1O75610 366 aa10.5□□□□□ -0.73
CCDC47-203ENST00000580986 AP2A1O95782 977 aa10.5□□□□□ -0.73
CCDC47-203ENST00000580986 IFNB1P01574 187 aa10.5□□□□□ -0.73
CCDC47-203ENST00000580986 KRT14P02533 472 aa10.5□□□□□ -0.73
CCDC47-203ENST00000580986 CTSLP07711 333 aa10.5□□□□□ -0.73
CCDC47-203ENST00000580986 GABRG2P18507 467 aa10.5□□□□□ -0.73
CCDC47-203ENST00000580986 NFKBIAP25963 317 aa10.5□□□□□ -0.73
CCDC47-203ENST00000580986 RPL22P35268 128 aaKnown RBP10.5□□□□□ -0.73
CCDC47-203ENST00000580986 WASP42768 502 aa10.5□□□□□ -0.73
CCDC47-203ENST00000580986 RPS14P62263 151 aaKnown RBP10.5□□□□□ -0.73
CCDC47-203ENST00000580986 POLR2LP62875 67 aaKnown RBP10.5□□□□□ -0.73
CCDC47-203ENST00000580986 DSC2Q02487 901 aa10.5□□□□□ -0.73
CCDC47-203ENST00000580986 TTC31Q49AM3 519 aaPredicted RBP10.5□□□□□ -0.73
CCDC47-203ENST00000580986 ATXN7L2Q5T6C5 722 aaPredicted RBP10.5□□□□□ -0.73
CCDC47-203ENST00000580986 ARMC3Q5W041 872 aa10.5□□□□□ -0.73
CCDC47-203ENST00000580986 GDPD4Q6W3E5 623 aa10.5□□□□□ -0.73
CCDC47-203ENST00000580986 B4GALNT4Q76KP1 1039 aa10.5□□□□□ -0.73
CCDC47-203ENST00000580986 JAMLQ86YT9 394 aa10.5□□□□□ -0.73
CCDC47-203ENST00000580986 TMPRSS6Q8IU80 811 aa10.5□□□□□ -0.73
CCDC47-203ENST00000580986 C1orf210Q8IVY1 113 aa10.5□□□□□ -0.73
CCDC47-203ENST00000580986 RAVER1Q8IY67 606 aaKnown RBP10.5□□□□□ -0.73
CCDC47-203ENST00000580986 ZNF366Q8N895 744 aa10.5□□□□□ -0.73
CCDC47-203ENST00000580986 TMEM105Q8N8V8 129 aa10.5□□□□□ -0.73
CCDC47-203ENST00000580986 CHST14Q8NCH0 376 aa10.5□□□□□ -0.73
CCDC47-203ENST00000580986 TSTD1Q8NFU3 115 aa10.5□□□□□ -0.73
CCDC47-203ENST00000580986 PIP4K2CQ8TBX8 421 aa10.5□□□□□ -0.73
CCDC47-203ENST00000580986 PRCCQ92733 491 aaPredicted RBP10.5□□□□□ -0.73
CCDC47-203ENST00000580986 FEM1CQ96JP0 617 aa10.5□□□□□ -0.73
CCDC47-203ENST00000580986 TRIB3Q96RU7 358 aa10.5□□□□□ -0.73
CCDC47-203ENST00000580986 SRPK1Q96SB4 655 aaKnown RBP10.5□□□□□ -0.73
CCDC47-203ENST00000580986 GORASP1Q9BQQ3 440 aa10.5□□□□□ -0.73
CCDC47-203ENST00000580986 KDM4CQ9H3R0 1056 aa10.5□□□□□ -0.73
CCDC47-203ENST00000580986 SUV39H2Q9H5I1 410 aa10.5□□□□□ -0.73
CCDC47-203ENST00000580986 EPHX3Q9H6B9 360 aa10.5□□□□□ -0.73
CCDC47-203ENST00000580986 ZDHHC6Q9H6R6 413 aa10.5□□□□□ -0.73
CCDC47-203ENST00000580986 C10orf88Q9H8K7 445 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms