RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 DPY19L3Q6ZPD9 716 aa7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 PARS2Q7L3T8 475 aaKnown RBP7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 TIPARPQ7Z3E1 657 aaKnown RBP7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 CCDC13Q8IYE1 715 aa7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 TMEM174Q8WUU8 243 aa7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 ASB12Q8WXK4 309 aa7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 IRGQQ8WZA9 623 aa7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 TSACCQ96A04 125 aaPredicted RBP7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 VOPP1Q96AW1 172 aa7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 EEF2KMTQ96G04 330 aa7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 SERPINB11Q96P15 392 aa7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 NUDT22Q9BRQ3 303 aa7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 DDA1Q9BW61 102 aa7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 IMPG2Q9BZV3 1241 aa7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 TNKS2Q9H2K2 1166 aa7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 GPN2Q9H9Y4 310 aaPredicted RBP7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 MBNL1Q9NR56 388 aaKnown RBP7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 IL36AQ9UHA7 158 aa7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 PILRAQ9UKJ1 303 aa7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 DOLKQ9UPQ8 538 aa7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 MRPS18BQ9Y676 258 aaKnown RBP7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 ARHGEF17Q96PE2 2063 aaPredicted RBP7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 IGHV5-10-1A0A0J9YXX1 117 aa7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 F5H5T6 163 aa7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 M0QYT0 321 aa7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 O00370 1275 aa7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 HGSO14964 777 aaPredicted RBP7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 SORBS2O94875 1100 aaKnown RBP7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 IGLV3-25P01717 112 aa7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 ALPIP09923 528 aa7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 FURINP09958 794 aa7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 VSIG8P0DPA2 414 aa7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 L1CAMP32004 1257 aa7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 PITX1P78337 314 aaPredicted RBP7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 SGCGQ13326 291 aa7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 EIF4EBP2Q13542 120 aaPredicted RBP7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 SEPT6Q14141 434 aa7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 HLTFQ14527 1009 aaKnown RBP eCLIP7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 MAP9Q49MG5 647 aa7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 NADK2Q4G0N4 442 aa7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 CRTC2Q53ET0 693 aaPredicted RBP7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 SYPL2Q5VXT5 272 aa7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 FBXL22Q6P050 247 aa7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 C16orf46Q6P387 395 aa7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 UNC13DQ70J99 1090 aa7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 BRAPQ7Z569 592 aa7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 VPS36Q86VN1 386 aa7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 HID1Q8IV36 788 aa7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 ATP11CQ8NB49 1132 aa7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 TP53I13Q8NBR0 393 aaPredicted RBP7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 PRR7Q8TB68 274 aa7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 SLC35F5Q8WV83 523 aa7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 SCG3Q8WXD2 468 aaKnown RBP7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 STARD8Q92502 1023 aa7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 ART4Q93070 314 aa7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 RNF34Q969K3 372 aa7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 BTN2A3PQ96KV6 586 aa7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 CCDC74BQ96LY2 380 aa7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 C7orf25Q9BPX7 421 aa7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 ZSWIM1Q9BR11 485 aa7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 UNKQ9C0B0 810 aaKnown RBP7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 OCIAD1Q9NX40 245 aa7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 LRIT1Q9P2V4 623 aa7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 VPS51Q9UID3 782 aa7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 VPS28Q9UK41 221 aa7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 TLK1Q9UKI8 766 aa7.79□□□□□ -1.16
SMARCE1-217ENST00000580654 SVILO95425 2214 aa7.78□□□□□ -1.16
SMARCE1-217ENST00000580654 ANKHD1Q8IWZ3 2542 aaKnown RBP7.78□□□□□ -1.16
SMARCE1-217ENST00000580654 KCNU1A8MYU2 1149 aa7.78□□□□□ -1.16
SMARCE1-217ENST00000580654 MKRN2OSH3BPM6 223 aa7.78□□□□□ -1.16
SMARCE1-217ENST00000580654 TSPAN6O43657 245 aa7.78□□□□□ -1.16
SMARCE1-217ENST00000580654 ENDOD1O94919 500 aa7.78□□□□□ -1.16
SMARCE1-217ENST00000580654 CPNE6O95741 557 aa7.78□□□□□ -1.16
SMARCE1-217ENST00000580654 NR3C1P04150 777 aa7.78□□□□□ -1.16
SMARCE1-217ENST00000580654 SETSIPP0DME0 302 aa7.78□□□□□ -1.16
SMARCE1-217ENST00000580654 CTSEP14091 401 aa7.78□□□□□ -1.16
SMARCE1-217ENST00000580654 TCN2P20062 427 aa7.78□□□□□ -1.16
SMARCE1-217ENST00000580654 FECHP22830 423 aa7.78□□□□□ -1.16
SMARCE1-217ENST00000580654 F8A1P23610 371 aa7.78□□□□□ -1.16
SMARCE1-217ENST00000580654 VAMP7P51809 220 aa7.78□□□□□ -1.16
SMARCE1-217ENST00000580654 OR1D5P58170 312 aa7.78□□□□□ -1.16
SMARCE1-217ENST00000580654 NUCB2P80303 420 aa7.78□□□□□ -1.16
SMARCE1-217ENST00000580654 C14orf28Q4W4Y0 310 aa7.78□□□□□ -1.16
SMARCE1-217ENST00000580654 ANKS6Q68DC2 871 aa7.78□□□□□ -1.16
SMARCE1-217ENST00000580654 FAM173BQ6P4H8 233 aa7.78□□□□□ -1.16
SMARCE1-217ENST00000580654 C22orf39Q6P5X5 142 aa7.78□□□□□ -1.16
SMARCE1-217ENST00000580654 LINGO4Q6UY18 593 aa7.78□□□□□ -1.16
SMARCE1-217ENST00000580654 PIM3Q86V86 326 aa7.78□□□□□ -1.16
SMARCE1-217ENST00000580654 GKN2Q86XP6 184 aa7.78□□□□□ -1.16
SMARCE1-217ENST00000580654 SLC34A3Q8N130 599 aa7.78□□□□□ -1.16
SMARCE1-217ENST00000580654 BMPERQ8N8U9 685 aa7.78□□□□□ -1.16
SMARCE1-217ENST00000580654 TFAP2BQ92481 460 aa7.78□□□□□ -1.16
SMARCE1-217ENST00000580654 PPP1R16AQ96I34 528 aa7.78□□□□□ -1.16
SMARCE1-217ENST00000580654 CCDC114Q96M63 670 aa7.78□□□□□ -1.16
SMARCE1-217ENST00000580654 RBM15Q96T37 977 aaKnown RBP eCLIP7.78□□□□□ -1.16
SMARCE1-217ENST00000580654 DNAI2Q9GZS0 605 aa7.78□□□□□ -1.16
SMARCE1-217ENST00000580654 KCTD10Q9H3F6 313 aa7.78□□□□□ -1.16
SMARCE1-217ENST00000580654 MMRN2Q9H8L6 949 aa7.78□□□□□ -1.16
SMARCE1-217ENST00000580654 SLC39A1Q9NY26 324 aa7.78□□□□□ -1.16
SMARCE1-217ENST00000580654 HESX1Q9UBX0 185 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms