RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 MGME1Q9BQP7 344 aa12.31□□□□□ -0.44
CCDC84-209ENST00000580556 CINPQ9BW66 212 aaPredicted RBP12.31□□□□□ -0.44
CCDC84-209ENST00000580556 FBRSQ9HAH7 460 aa12.31□□□□□ -0.44
CCDC84-209ENST00000580556 FSCN3Q9NQT6 498 aa12.31□□□□□ -0.44
CCDC84-209ENST00000580556 SMARCAL1Q9NZC9 954 aa12.31□□□□□ -0.44
CCDC84-209ENST00000580556 SUN2Q9UH99 717 aa12.31□□□□□ -0.44
CCDC84-209ENST00000580556 SLCO3A1Q9UIG8 710 aa12.31□□□□□ -0.44
CCDC84-209ENST00000580556 MMP17Q9ULZ9 603 aa12.31□□□□□ -0.44
CCDC84-209ENST00000580556 MRFAP1Q9Y605 127 aa12.31□□□□□ -0.44
CCDC84-209ENST00000580556 STON1Q9Y6Q2 735 aa12.31□□□□□ -0.44
CCDC84-209ENST00000580556 ADAMTS9Q9P2N4 1935 aa12.31□□□□□ -0.44
CCDC84-209ENST00000580556 K7ERQ8 282 aa12.3□□□□□ -0.44
CCDC84-209ENST00000580556 KCNK1O00180 336 aa12.3□□□□□ -0.44
CCDC84-209ENST00000580556 RNF103O00237 685 aa12.3□□□□□ -0.44
CCDC84-209ENST00000580556 PDE2AO00408 941 aaPredicted RBP12.3□□□□□ -0.44
CCDC84-209ENST00000580556 ALOX15BO15296 676 aa12.3□□□□□ -0.44
CCDC84-209ENST00000580556 ADAM23O75077 832 aa12.3□□□□□ -0.44
CCDC84-209ENST00000580556 ZNF821O75541 412 aaPredicted RBP12.3□□□□□ -0.44
CCDC84-209ENST00000580556 STK10O94804 968 aaKnown RBP12.3□□□□□ -0.44
CCDC84-209ENST00000580556 PTPN3P26045 913 aa12.3□□□□□ -0.44
CCDC84-209ENST00000580556 RBL1P28749 1068 aa12.3□□□□□ -0.44
CCDC84-209ENST00000580556 TIE1P35590 1138 aa12.3□□□□□ -0.44
CCDC84-209ENST00000580556 CSNK1DP48730 415 aa12.3□□□□□ -0.44
CCDC84-209ENST00000580556 SEC13P55735 322 aa12.3□□□□□ -0.44
CCDC84-209ENST00000580556 SIM1P81133 766 aaPredicted RBP12.3□□□□□ -0.44
CCDC84-209ENST00000580556 CAMK2GQ13555 558 aaPredicted RBP12.3□□□□□ -0.44
CCDC84-209ENST00000580556 ELAVL3Q14576 367 aaKnown RBP12.3□□□□□ -0.44
CCDC84-209ENST00000580556 CYTH1Q15438 398 aa12.3□□□□□ -0.44
CCDC84-209ENST00000580556 TEX44Q53QW1 395 aa12.3□□□□□ -0.44
CCDC84-209ENST00000580556 C2orf27AQ580R0 203 aa12.3□□□□□ -0.44
CCDC84-209ENST00000580556 EOGTQ5NDL2 527 aa12.3□□□□□ -0.44
CCDC84-209ENST00000580556 EMC10Q5UCC4 262 aa12.3□□□□□ -0.44
CCDC84-209ENST00000580556 ARMCX6Q7L4S7 300 aa12.3□□□□□ -0.44
CCDC84-209ENST00000580556 ALLCQ8N6M5 410 aa12.3□□□□□ -0.44
CCDC84-209ENST00000580556 FRMD1Q8N878 549 aa12.3□□□□□ -0.44
CCDC84-209ENST00000580556 OR2AP1Q8NGE2 309 aa12.3□□□□□ -0.44
CCDC84-209ENST00000580556 GDAP1L1Q96MZ0 367 aa12.3□□□□□ -0.44
CCDC84-209ENST00000580556 RUNDC3BQ96NL0 473 aa12.3□□□□□ -0.44
CCDC84-209ENST00000580556 ACOX2Q99424 681 aa12.3□□□□□ -0.44
CCDC84-209ENST00000580556 FAM118BQ9BPY3 351 aa12.3□□□□□ -0.44
CCDC84-209ENST00000580556 AP1M1Q9BXS5 423 aa12.3□□□□□ -0.44
CCDC84-209ENST00000580556 USP29Q9HBJ7 922 aa12.3□□□□□ -0.44
CCDC84-209ENST00000580556 TMEM74BQ9NUR3 256 aa12.3□□□□□ -0.44
CCDC84-209ENST00000580556 CACNA2D2Q9NY47 1150 aa12.3□□□□□ -0.44
CCDC84-209ENST00000580556 LHX3Q9UBR4 397 aa12.3□□□□□ -0.44
CCDC84-209ENST00000580556 FEZ2Q9UHY8 353 aaPredicted RBP12.3□□□□□ -0.44
CCDC84-209ENST00000580556 TRHDEQ9UKU6 1024 aa12.3□□□□□ -0.44
CCDC84-209ENST00000580556 ATP8A1Q9Y2Q0 1164 aa12.3□□□□□ -0.44
CCDC84-209ENST00000580556 FCF1Q9Y324 198 aaKnown RBP12.3□□□□□ -0.44
CCDC84-209ENST00000580556 C5orf60A6NFR6 353 aa12.29□□□□□ -0.44
CCDC84-209ENST00000580556 TTC34A8MYJ7 566 aa12.29□□□□□ -0.44
CCDC84-209ENST00000580556 WASH3PC4AMC7 463 aa12.29□□□□□ -0.44
CCDC84-209ENST00000580556 KCNN4O15554 427 aa12.29□□□□□ -0.44
CCDC84-209ENST00000580556 OPHN1O60890 802 aa12.29□□□□□ -0.44
CCDC84-209ENST00000580556 KLF8O95600 359 aaPredicted RBP12.29□□□□□ -0.44
CCDC84-209ENST00000580556 IGSF6O95976 241 aa12.29□□□□□ -0.44
CCDC84-209ENST00000580556 CR2P20023 1033 aa12.29□□□□□ -0.44
CCDC84-209ENST00000580556 CES1P23141 567 aa12.29□□□□□ -0.44
CCDC84-209ENST00000580556 PRKCHP24723 683 aa12.29□□□□□ -0.44
CCDC84-209ENST00000580556 NUMBP49757 651 aa12.29□□□□□ -0.44
CCDC84-209ENST00000580556 RHOAP61586 193 aa12.29□□□□□ -0.44
CCDC84-209ENST00000580556 SNRPD1P62314 119 aaKnown RBP12.29□□□□□ -0.44
CCDC84-209ENST00000580556 ZBTB17Q13105 803 aa12.29□□□□□ -0.44
CCDC84-209ENST00000580556 GRM3Q14832 879 aa12.29□□□□□ -0.44
CCDC84-209ENST00000580556 STARD3Q14849 445 aa12.29□□□□□ -0.44
CCDC84-209ENST00000580556 SLC14A2Q15849 920 aa12.29□□□□□ -0.44
CCDC84-209ENST00000580556 P3H1Q32P28 736 aa12.29□□□□□ -0.44
CCDC84-209ENST00000580556 TRIM61Q5EBN2 209 aa12.29□□□□□ -0.44
CCDC84-209ENST00000580556 CARD16Q5EG05 197 aa12.29□□□□□ -0.44
CCDC84-209ENST00000580556 ANO7Q6IWH7 933 aa12.29□□□□□ -0.44
CCDC84-209ENST00000580556 LEKR1Q6ZMV7 388 aa12.29□□□□□ -0.44
CCDC84-209ENST00000580556 TXNDC5Q8NBS9 432 aaKnown RBP12.29□□□□□ -0.44
CCDC84-209ENST00000580556 TSTD1Q8NFU3 115 aa12.29□□□□□ -0.44
CCDC84-209ENST00000580556 OR2A12Q8NGT7 310 aa12.29□□□□□ -0.44
CCDC84-209ENST00000580556 ATL2Q8NHH9 583 aa12.29□□□□□ -0.44
CCDC84-209ENST00000580556 GRK7Q8WTQ7 553 aa12.29□□□□□ -0.44
CCDC84-209ENST00000580556 RLN3Q8WXF3 142 aa12.29□□□□□ -0.44
CCDC84-209ENST00000580556 PTPRN2Q92932 1015 aa12.29□□□□□ -0.44
CCDC84-209ENST00000580556 SLCO2A1Q92959 643 aa12.29□□□□□ -0.44
CCDC84-209ENST00000580556 MAGOHBQ96A72 148 aaKnown RBP12.29□□□□□ -0.44
CCDC84-209ENST00000580556 TEKT5Q96M29 485 aa12.29□□□□□ -0.44
CCDC84-209ENST00000580556 SPATA13Q96N96 652 aa12.29□□□□□ -0.44
CCDC84-209ENST00000580556 TMEM121Q9BTD3 319 aa12.29□□□□□ -0.44
CCDC84-209ENST00000580556 POLR1EQ9GZS1 481 aaKnown RBP12.29□□□□□ -0.44
CCDC84-209ENST00000580556 CD248Q9HCU0 757 aa12.29□□□□□ -0.44
CCDC84-209ENST00000580556 RBM22Q9NW64 420 aaKnown RBP eCLIP12.29□□□□□ -0.44
CCDC84-209ENST00000580556 PCYOX1Q9UHG3 505 aa12.29□□□□□ -0.44
CCDC84-209ENST00000580556 ZNF148Q9UQR1 794 aa12.29□□□□□ -0.44
CCDC84-209ENST00000580556 ACTL7AQ9Y615 435 aa12.29□□□□□ -0.44
CCDC84-209ENST00000580556 TNRC6BQ9UPQ9 1833 aaKnown RBP12.29□□□□□ -0.44
CCDC84-209ENST00000580556 ATXN2Q99700 1313 aaKnown RBP12.29□□□□□ -0.44
CCDC84-209ENST00000580556 GON4LQ3T8J9 2241 aa12.29□□□□□ -0.44
CCDC84-209ENST00000580556 PI4KAP42356 2102 aa12.28□□□□□ -0.44
CCDC84-209ENST00000580556 A0A1W2PQF6 199 aa12.28□□□□□ -0.44
CCDC84-209ENST00000580556 SGK1O00141 431 aa12.28□□□□□ -0.44
CCDC84-209ENST00000580556 SYNCRIPO60506 623 aaKnown RBP12.28□□□□□ -0.44
CCDC84-209ENST00000580556 GCATO75600 419 aa12.28□□□□□ -0.44
CCDC84-209ENST00000580556 NEBLO76041 1014 aa12.28□□□□□ -0.44
CCDC84-209ENST00000580556 JCHAINP01591 159 aa12.28□□□□□ -0.44
CCDC84-209ENST00000580556 HLA-DQB2P05538 268 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms