RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 GRAMD1AQ96CP6 724 aa12.84□□□□□ -0.35
CDK5RAP3-217ENST00000580287 RSPRY1Q96DX4 576 aa12.84□□□□□ -0.35
CDK5RAP3-217ENST00000580287 IL12RB2Q99665 862 aa12.84□□□□□ -0.35
CDK5RAP3-217ENST00000580287 GBA3Q9H227 469 aa12.84□□□□□ -0.35
CDK5RAP3-217ENST00000580287 IL1RAPL1Q9NZN1 696 aa12.84□□□□□ -0.35
CDK5RAP3-217ENST00000580287 ARHGAP26Q9UNA1 814 aa12.84□□□□□ -0.35
CDK5RAP3-217ENST00000580287 NYNRINQ9P2P1 1898 aaKnown RBP12.84□□□□□ -0.35
CDK5RAP3-217ENST00000580287 EIF4E1BA6NMX2 242 aaKnown RBP12.84□□□□□ -0.35
CDK5RAP3-217ENST00000580287 COPEO14579 308 aa12.84□□□□□ -0.35
CDK5RAP3-217ENST00000580287 MT-CO1P00395 513 aa12.84□□□□□ -0.35
CDK5RAP3-217ENST00000580287 SNRPAP09012 282 aaKnown RBP12.84□□□□□ -0.35
CDK5RAP3-217ENST00000580287 MGAT1P26572 445 aa12.84□□□□□ -0.35
CDK5RAP3-217ENST00000580287 MAPKAPK2P49137 400 aa12.84□□□□□ -0.35
CDK5RAP3-217ENST00000580287 DSC2Q02487 901 aa12.84□□□□□ -0.35
CDK5RAP3-217ENST00000580287 NIPAL4Q0D2K0 466 aa12.84□□□□□ -0.35
CDK5RAP3-217ENST00000580287 ARHGAP15Q53QZ3 475 aa12.84□□□□□ -0.35
CDK5RAP3-217ENST00000580287 LGSNQ5TDP6 509 aa12.84□□□□□ -0.35
CDK5RAP3-217ENST00000580287 NAIF1Q69YI7 327 aaPredicted RBP12.84□□□□□ -0.35
CDK5RAP3-217ENST00000580287 TRIM68Q6AZZ1 485 aa12.84□□□□□ -0.35
CDK5RAP3-217ENST00000580287 APCDD1Q8J025 514 aa12.84□□□□□ -0.35
CDK5RAP3-217ENST00000580287 IPMKQ8NFU5 416 aa12.84□□□□□ -0.35
CDK5RAP3-217ENST00000580287 RFWD2Q8NHY2 731 aa12.84□□□□□ -0.35
CDK5RAP3-217ENST00000580287 LRRC39Q96DD0 335 aa12.84□□□□□ -0.35
CDK5RAP3-217ENST00000580287 MRPL38Q96DV4 380 aaKnown RBP12.84□□□□□ -0.35
CDK5RAP3-217ENST00000580287 APOPT1Q96IL0 206 aa12.84□□□□□ -0.35
CDK5RAP3-217ENST00000580287 ZFYVE19Q96K21 471 aa12.84□□□□□ -0.35
CDK5RAP3-217ENST00000580287 FAM161BQ96MY7 647 aa12.84□□□□□ -0.35
CDK5RAP3-217ENST00000580287 ZNF570Q96NI8 536 aa12.84□□□□□ -0.35
CDK5RAP3-217ENST00000580287 PLAC1Q9HBJ0 212 aa12.84□□□□□ -0.35
CDK5RAP3-217ENST00000580287 GLOD4Q9HC38 313 aa12.84□□□□□ -0.35
CDK5RAP3-217ENST00000580287 ATP13A1Q9HD20 1204 aa12.84□□□□□ -0.35
CDK5RAP3-217ENST00000580287 DOCK4Q8N1I0 1966 aa12.84□□□□□ -0.35
CDK5RAP3-217ENST00000580287 A0A0G2JND7 137 aa12.83□□□□□ -0.36
CDK5RAP3-217ENST00000580287 GFRA2O00451 464 aa12.83□□□□□ -0.36
CDK5RAP3-217ENST00000580287 TM9SF1O15321 606 aa12.83□□□□□ -0.36
CDK5RAP3-217ENST00000580287 EDF1O60869 148 aaKnown RBP12.83□□□□□ -0.36
CDK5RAP3-217ENST00000580287 CDH18Q13634 790 aa12.83□□□□□ -0.36
CDK5RAP3-217ENST00000580287 PARP15Q460N3 678 aa12.83□□□□□ -0.36
CDK5RAP3-217ENST00000580287 CDHR3Q6ZTQ4 885 aa12.83□□□□□ -0.36
CDK5RAP3-217ENST00000580287 NAT16Q8N8M0 369 aa12.83□□□□□ -0.36
CDK5RAP3-217ENST00000580287 PMM1Q92871 262 aa12.83□□□□□ -0.36
CDK5RAP3-217ENST00000580287 NSMCE3Q96MG7 304 aa12.83□□□□□ -0.36
CDK5RAP3-217ENST00000580287 MECRQ9BV79 373 aa12.83□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ZNF576Q9H609 170 aa12.83□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ZNF395Q9H8N7 513 aaPredicted RBP12.83□□□□□ -0.36
CDK5RAP3-217ENST00000580287 SSU72Q9NP77 194 aaKnown RBP12.83□□□□□ -0.36
CDK5RAP3-217ENST00000580287 SLC17A6Q9P2U8 582 aa12.83□□□□□ -0.36
CDK5RAP3-217ENST00000580287 TRHDEQ9UKU6 1024 aa12.83□□□□□ -0.36
CDK5RAP3-217ENST00000580287 TRIOO75962 3097 aa12.83□□□□□ -0.36
CDK5RAP3-217ENST00000580287 OBSL1O75147 1896 aa12.83□□□□□ -0.36
CDK5RAP3-217ENST00000580287 BRWD1Q9NSI6 2320 aa12.83□□□□□ -0.36
CDK5RAP3-217ENST00000580287 K7ERQ8 282 aa12.83□□□□□ -0.36
CDK5RAP3-217ENST00000580287 MTSS1O43312 755 aa12.83□□□□□ -0.36
CDK5RAP3-217ENST00000580287 KRT38O76015 456 aa12.83□□□□□ -0.36
CDK5RAP3-217ENST00000580287 F7P08709 466 aaPredicted RBP12.83□□□□□ -0.36
CDK5RAP3-217ENST00000580287 BMP1P13497 986 aa12.83□□□□□ -0.36
CDK5RAP3-217ENST00000580287 CSKP41240 450 aa12.83□□□□□ -0.36
CDK5RAP3-217ENST00000580287 CHRNA4P43681 627 aa12.83□□□□□ -0.36
CDK5RAP3-217ENST00000580287 RGRP47804 291 aa12.83□□□□□ -0.36
CDK5RAP3-217ENST00000580287 CCNHP51946 323 aaPredicted RBP12.83□□□□□ -0.36
CDK5RAP3-217ENST00000580287 CERCAMQ5T4B2 595 aa12.83□□□□□ -0.36
CDK5RAP3-217ENST00000580287 KCTD11Q693B1 232 aa12.83□□□□□ -0.36
CDK5RAP3-217ENST00000580287 GET4Q7L5D6 327 aaPredicted RBP12.83□□□□□ -0.36
CDK5RAP3-217ENST00000580287 MTDHQ86UE4 582 aaKnown RBP12.83□□□□□ -0.36
CDK5RAP3-217ENST00000580287 MFN1Q8IWA4 741 aa12.83□□□□□ -0.36
CDK5RAP3-217ENST00000580287 BATF3Q9NR55 127 aa12.83□□□□□ -0.36
CDK5RAP3-217ENST00000580287 NOP53Q9NZM5 478 aaKnown RBP12.83□□□□□ -0.36
CDK5RAP3-217ENST00000580287 TBC1D30Q9Y2I9 924 aa12.83□□□□□ -0.36
CDK5RAP3-217ENST00000580287 STARD13Q9Y3M8 1113 aa12.83□□□□□ -0.36
CDK5RAP3-217ENST00000580287 MTCL1Q9Y4B5 1905 aaKnown RBP12.83□□□□□ -0.36
CDK5RAP3-217ENST00000580287 MYOFQ9NZM1 2061 aa12.82□□□□□ -0.36
CDK5RAP3-217ENST00000580287 SDR42E2A6NKP2 422 aa12.82□□□□□ -0.36
CDK5RAP3-217ENST00000580287 PRAMEF11O60813 436 aa12.82□□□□□ -0.36
CDK5RAP3-217ENST00000580287 SP100P23497 879 aaPredicted RBP12.82□□□□□ -0.36
CDK5RAP3-217ENST00000580287 PRKCHP24723 683 aa12.82□□□□□ -0.36
CDK5RAP3-217ENST00000580287 WEE1P30291 646 aa12.82□□□□□ -0.36
CDK5RAP3-217ENST00000580287 CD70P32970 193 aa12.82□□□□□ -0.36
CDK5RAP3-217ENST00000580287 CD86P42081 329 aa12.82□□□□□ -0.36
CDK5RAP3-217ENST00000580287 MAGEA3P43357 314 aa12.82□□□□□ -0.36
CDK5RAP3-217ENST00000580287 RENBPP51606 427 aa12.82□□□□□ -0.36
CDK5RAP3-217ENST00000580287 YBEYP58557 167 aaPredicted RBP12.82□□□□□ -0.36
CDK5RAP3-217ENST00000580287 HNRNPDQ14103 355 aaKnown RBP12.82□□□□□ -0.36
CDK5RAP3-217ENST00000580287 FYB2Q5VWT5 728 aa12.82□□□□□ -0.36
CDK5RAP3-217ENST00000580287 TIGD7Q6NT04 549 aaPredicted RBP12.82□□□□□ -0.36
CDK5RAP3-217ENST00000580287 SYCE2Q6PIF2 218 aa12.82□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ASRGL1Q7L266 308 aa12.82□□□□□ -0.36
CDK5RAP3-217ENST00000580287 DNAAF3Q8N9W5 541 aa12.82□□□□□ -0.36
CDK5RAP3-217ENST00000580287 LRRC37BQ96QE4 947 aa12.82□□□□□ -0.36
CDK5RAP3-217ENST00000580287 SRPK1Q96SB4 655 aaKnown RBP12.82□□□□□ -0.36
CDK5RAP3-217ENST00000580287 FEM1AQ9BSK4 669 aa12.82□□□□□ -0.36
CDK5RAP3-217ENST00000580287 MANSC1Q9H8J5 431 aa12.82□□□□□ -0.36
CDK5RAP3-217ENST00000580287 PDFQ9HBH1 243 aa12.82□□□□□ -0.36
CDK5RAP3-217ENST00000580287 PCMTD2Q9NV79 361 aa12.82□□□□□ -0.36
CDK5RAP3-217ENST00000580287 VPS28Q9UK41 221 aa12.82□□□□□ -0.36
CDK5RAP3-217ENST00000580287 NEDD8-MDP1E9PL57 170 aa12.82□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ATP9BO43861 1147 aa12.82□□□□□ -0.36
CDK5RAP3-217ENST00000580287 UNC5CO95185 931 aa12.82□□□□□ -0.36
CDK5RAP3-217ENST00000580287 LUC7L3O95232 432 aaKnown RBP12.82□□□□□ -0.36
CDK5RAP3-217ENST00000580287 AP2A1O95782 977 aa12.82□□□□□ -0.36
CDK5RAP3-217ENST00000580287 T-ENOLP0DO92 83 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms