RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 FFAR2O15552 330 aa11.68□□□□□ -0.54
SSH2-208ENST00000579040 ATMINO43313 823 aaPredicted RBP11.68□□□□□ -0.54
SSH2-208ENST00000579040 PRAMEF11O60813 436 aa11.68□□□□□ -0.54
SSH2-208ENST00000579040 FTLP02792 175 aaPredicted RBP11.68□□□□□ -0.54
SSH2-208ENST00000579040 CSF2P04141 144 aa11.68□□□□□ -0.54
SSH2-208ENST00000579040 GIMD1P0DJR0 217 aa11.68□□□□□ -0.54
SSH2-208ENST00000579040 MYBL1P10243 752 aa11.68□□□□□ -0.54
SSH2-208ENST00000579040 CKMT1AP12532 417 aa11.68□□□□□ -0.54
SSH2-208ENST00000579040 PFN3P60673 137 aa11.68□□□□□ -0.54
SSH2-208ENST00000579040 CYP4F3Q08477 520 aa11.68□□□□□ -0.54
SSH2-208ENST00000579040 ELP6Q0PNE2 266 aa11.68□□□□□ -0.54
SSH2-208ENST00000579040 PTK2BQ14289 1009 aa11.68□□□□□ -0.54
SSH2-208ENST00000579040 IQCB1Q15051 598 aa11.68□□□□□ -0.54
SSH2-208ENST00000579040 FIGNQ5HY92 759 aa11.68□□□□□ -0.54
SSH2-208ENST00000579040 E4F1Q66K89 784 aaPredicted RBP11.68□□□□□ -0.54
SSH2-208ENST00000579040 ZNF571Q7Z3V5 609 aaPredicted RBP11.68□□□□□ -0.54
SSH2-208ENST00000579040 FAM181AQ8N9Y4 354 aa11.68□□□□□ -0.54
SSH2-208ENST00000579040 CXorf40AQ8TE69 158 aa11.68□□□□□ -0.54
SSH2-208ENST00000579040 CENPTQ96BT3 561 aa11.68□□□□□ -0.54
SSH2-208ENST00000579040 TUBGCP5Q96RT8 1024 aa11.68□□□□□ -0.54
SSH2-208ENST00000579040 SNRNP25Q9BV90 132 aaKnown RBP11.68□□□□□ -0.54
SSH2-208ENST00000579040 NRSN2Q9GZP1 204 aa11.68□□□□□ -0.54
SSH2-208ENST00000579040 DHX35Q9H5Z1 703 aaKnown RBP11.68□□□□□ -0.54
SSH2-208ENST00000579040 PDFQ9HBH1 243 aa11.68□□□□□ -0.54
SSH2-208ENST00000579040 GPATCH2LQ9NWQ4 482 aa11.68□□□□□ -0.54
SSH2-208ENST00000579040 IPO11Q9UI26 975 aaKnown RBP11.68□□□□□ -0.54
SSH2-208ENST00000579040 GGT7Q9UJ14 662 aa11.68□□□□□ -0.54
SSH2-208ENST00000579040 LHX6Q9UPM6 363 aa11.68□□□□□ -0.54
SSH2-208ENST00000579040 SHROOM3Q8TF72 1996 aa11.68□□□□□ -0.54
SSH2-208ENST00000579040 FREM2Q5SZK8 3169 aa11.68□□□□□ -0.54
SSH2-208ENST00000579040 RP1P56715 2156 aa11.68□□□□□ -0.54
SSH2-208ENST00000579040 TSPAN11A1L157 253 aa11.67□□□□□ -0.54
SSH2-208ENST00000579040 DDX3XO00571 662 aaKnown RBP eCLIP11.67□□□□□ -0.54
SSH2-208ENST00000579040 PRPSAP2O60256 369 aa11.67□□□□□ -0.54
SSH2-208ENST00000579040 TM7SF2O76062 418 aa11.67□□□□□ -0.54
SSH2-208ENST00000579040 SERPINC1P01008 464 aa11.67□□□□□ -0.54
SSH2-208ENST00000579040 GP1BAP07359 652 aa11.67□□□□□ -0.54
SSH2-208ENST00000579040 TIMP2P16035 220 aa11.67□□□□□ -0.54
SSH2-208ENST00000579040 XPAP23025 273 aaPredicted RBP11.67□□□□□ -0.54
SSH2-208ENST00000579040 CSNK1DP48730 415 aa11.67□□□□□ -0.54
SSH2-208ENST00000579040 HCAR3P49019 387 aa11.67□□□□□ -0.54
SSH2-208ENST00000579040 DUSP3P51452 185 aaPredicted RBP11.67□□□□□ -0.54
SSH2-208ENST00000579040 THOP1P52888 689 aa11.67□□□□□ -0.54
SSH2-208ENST00000579040 YPEL5P62699 121 aa11.67□□□□□ -0.54
SSH2-208ENST00000579040 TPM4P67936 248 aa11.67□□□□□ -0.54
SSH2-208ENST00000579040 TARDBPQ13148 414 aaKnown RBP eCLIP11.67□□□□□ -0.541e-7■■■■□ 24.6
SSH2-208ENST00000579040 PDE1CQ14123 709 aaPredicted RBP11.67□□□□□ -0.54
SSH2-208ENST00000579040 NR1I3Q14994 352 aa11.67□□□□□ -0.54
SSH2-208ENST00000579040 RTP5Q14D33 572 aa11.67□□□□□ -0.54
SSH2-208ENST00000579040 ACAP1Q15027 740 aa11.67□□□□□ -0.54
SSH2-208ENST00000579040 CYTH1Q15438 398 aa11.67□□□□□ -0.54
SSH2-208ENST00000579040 TMEM52BQ4KMG9 183 aa11.67□□□□□ -0.54
SSH2-208ENST00000579040 AFMIDQ63HM1 303 aa11.67□□□□□ -0.54
SSH2-208ENST00000579040 BRAT1Q6PJG6 821 aa11.67□□□□□ -0.54
SSH2-208ENST00000579040 RFX8Q6ZV50 586 aa11.67□□□□□ -0.54
SSH2-208ENST00000579040 ARFGAP1Q8N6T3 406 aa11.67□□□□□ -0.54
SSH2-208ENST00000579040 DCBLD1Q8N8Z6 715 aa11.67□□□□□ -0.54
SSH2-208ENST00000579040 ZNF548Q8NEK5 533 aaPredicted RBP11.67□□□□□ -0.54
SSH2-208ENST00000579040 BTN2A2Q8WVV5 523 aa11.67□□□□□ -0.54
SSH2-208ENST00000579040 ZNF653Q96CK0 615 aa11.67□□□□□ -0.54
SSH2-208ENST00000579040 TBATAQ96M53 351 aa11.67□□□□□ -0.54
SSH2-208ENST00000579040 ZNF641Q96N77 438 aaPredicted RBP11.67□□□□□ -0.54
SSH2-208ENST00000579040 NAP1L5Q96NT1 182 aaPredicted RBP11.67□□□□□ -0.54
SSH2-208ENST00000579040 PEBP4Q96S96 227 aa11.67□□□□□ -0.54
SSH2-208ENST00000579040 FUCA2Q9BTY2 467 aa11.67□□□□□ -0.54
SSH2-208ENST00000579040 MRPL47Q9HD33 250 aaKnown RBP11.67□□□□□ -0.54
SSH2-208ENST00000579040 NCKIPSDQ9NZQ3 722 aa11.67□□□□□ -0.54
SSH2-208ENST00000579040 CNOT8Q9UFF9 292 aaKnown RBP11.67□□□□□ -0.54
SSH2-208ENST00000579040 RAXQ9Y2V3 346 aa11.67□□□□□ -0.54
SSH2-208ENST00000579040 J3KR12 359 aa11.66□□□□□ -0.54
SSH2-208ENST00000579040 K7ESM1 405 aa11.66□□□□□ -0.54
SSH2-208ENST00000579040 TPP1O14773 563 aa11.66□□□□□ -0.54
SSH2-208ENST00000579040 DAPK3O43293 454 aa11.66□□□□□ -0.54
SSH2-208ENST00000579040 ERCC2P18074 760 aa11.66□□□□□ -0.54
SSH2-208ENST00000579040 MIPP30301 263 aa11.66□□□□□ -0.54
SSH2-208ENST00000579040 PCK1P35558 622 aa11.66□□□□□ -0.54
SSH2-208ENST00000579040 IGFALSP35858 605 aa11.66□□□□□ -0.54
SSH2-208ENST00000579040 PAPOLAP51003 745 aaKnown RBP11.66□□□□□ -0.54
SSH2-208ENST00000579040 CLDN6P56747 220 aa11.66□□□□□ -0.54
SSH2-208ENST00000579040 INSM1Q01101 510 aaPredicted RBP11.66□□□□□ -0.54
SSH2-208ENST00000579040 RFTN1Q14699 578 aaPredicted RBP11.66□□□□□ -0.54
SSH2-208ENST00000579040 CA9Q16790 459 aa11.66□□□□□ -0.54
SSH2-208ENST00000579040 ZNF542PQ5EBM4 170 aa11.66□□□□□ -0.54
SSH2-208ENST00000579040 LRRC73Q5JTD7 316 aa11.66□□□□□ -0.54
SSH2-208ENST00000579040 ZCCHC8Q6NZY4 707 aaKnown RBP11.66□□□□□ -0.54
SSH2-208ENST00000579040 CYP4V2Q6ZWL3 525 aaPredicted RBP11.66□□□□□ -0.54
SSH2-208ENST00000579040 VPS36Q86VN1 386 aa11.66□□□□□ -0.54
SSH2-208ENST00000579040 LZTR1Q8N653 840 aa11.66□□□□□ -0.54
SSH2-208ENST00000579040 SYN2Q92777 582 aaPredicted RBP11.66□□□□□ -0.54
SSH2-208ENST00000579040 IQCDQ96DY2 449 aa11.66□□□□□ -0.54
SSH2-208ENST00000579040 CELF6Q96J87 481 aaKnown RBP11.66□□□□□ -0.54
SSH2-208ENST00000579040 EXOC2Q96KP1 924 aa11.66□□□□□ -0.54
SSH2-208ENST00000579040 APOLD1Q96LR9 279 aa11.66□□□□□ -0.54
SSH2-208ENST00000579040 KCTD15Q96SI1 283 aaPredicted RBP11.66□□□□□ -0.54
SSH2-208ENST00000579040 SLC39A8Q9C0K1 460 aa11.66□□□□□ -0.54
SSH2-208ENST00000579040 ISCUQ9H1K1 167 aa11.66□□□□□ -0.54
SSH2-208ENST00000579040 SUV39H2Q9H5I1 410 aa11.66□□□□□ -0.54
SSH2-208ENST00000579040 PCSK1NQ9UHG2 260 aa11.66□□□□□ -0.54
SSH2-208ENST00000579040 CLCA2Q9UQC9 943 aa11.66□□□□□ -0.54
SSH2-208ENST00000579040 BZW2Q9Y6E2 419 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms