RNA–Protein interactions for RNA: ENST00000578412.1

TOP2A-204, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 882 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-204ENST00000578412 TRIM54Q9BYV2 358 aa4.26□□□□□ -1.73
TOP2A-204ENST00000578412 API5Q9BZZ5 524 aaKnown RBP4.26□□□□□ -1.73
TOP2A-204ENST00000578412 CIPCQ9C0C6 399 aa4.26□□□□□ -1.73
TOP2A-204ENST00000578412 PRSS22Q9GZN4 317 aa4.26□□□□□ -1.73
TOP2A-204ENST00000578412 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.26□□□□□ -1.73
TOP2A-204ENST00000578412 MS4A7Q9GZW8 240 aaPredicted RBP4.26□□□□□ -1.73
TOP2A-204ENST00000578412 BTBD1Q9H0C5 482 aa4.26□□□□□ -1.73
TOP2A-204ENST00000578412 MYLK2Q9H1R3 596 aa4.26□□□□□ -1.73
TOP2A-204ENST00000578412 ZMAT3Q9HA38 289 aaKnown RBP4.26□□□□□ -1.73
TOP2A-204ENST00000578412 AGO4Q9HCK5 861 aaKnown RBP4.26□□□□□ -1.73
TOP2A-204ENST00000578412 ELOVL5Q9NYP7 299 aa4.26□□□□□ -1.73
TOP2A-204ENST00000578412 KLHL13Q9P2N7 655 aa4.26□□□□□ -1.73
TOP2A-204ENST00000578412 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.26□□□□□ -1.73
TOP2A-204ENST00000578412 FBXO2Q9UK22 296 aaPredicted RBP4.26□□□□□ -1.73
TOP2A-204ENST00000578412 PCDHB7Q9Y5E2 793 aa4.26□□□□□ -1.73
TOP2A-204ENST00000578412 SNX14Q9Y5W7 946 aa4.26□□□□□ -1.73
TOP2A-204ENST00000578412 SQORQ9Y6N5 450 aa4.26□□□□□ -1.73
TOP2A-204ENST00000578412 MYO15AQ9UKN7 3530 aa4.26□□□□□ -1.73
TOP2A-204ENST00000578412 FANCMQ8IYD8 2048 aa4.26□□□□□ -1.73
TOP2A-204ENST00000578412 CACNA1IQ9P0X4 2223 aa4.25□□□□□ -1.73
TOP2A-204ENST00000578412 SRRM3A6NNA2 597 aaPredicted RBP4.25□□□□□ -1.73
TOP2A-204ENST00000578412 TMEM233B4DJY2 109 aa4.25□□□□□ -1.73
TOP2A-204ENST00000578412 FOXN3O00409 490 aaPredicted RBP4.25□□□□□ -1.73
TOP2A-204ENST00000578412 PPEF2O14830 753 aa4.25□□□□□ -1.73
TOP2A-204ENST00000578412 ZNF500O60304 480 aaPredicted RBP4.25□□□□□ -1.73
TOP2A-204ENST00000578412 MOSPD3O75425 235 aa4.25□□□□□ -1.73
TOP2A-204ENST00000578412 AGR2O95994 175 aa4.25□□□□□ -1.73
TOP2A-204ENST00000578412 DCNP07585 359 aaKnown RBP4.25□□□□□ -1.73
TOP2A-204ENST00000578412 LINC00271P0C7V0 271 aa4.25□□□□□ -1.73
TOP2A-204ENST00000578412 TGFB3P10600 412 aa4.25□□□□□ -1.73
TOP2A-204ENST00000578412 RPL17P18621 184 aaKnown RBP4.25□□□□□ -1.73
TOP2A-204ENST00000578412 ABCB4P21439 1286 aa4.25□□□□□ -1.73
TOP2A-204ENST00000578412 SLC7A1P30825 629 aa4.25□□□□□ -1.73
TOP2A-204ENST00000578412 MAPK9P45984 424 aa4.25□□□□□ -1.73
TOP2A-204ENST00000578412 CASP5P51878 434 aa4.25□□□□□ -1.73
TOP2A-204ENST00000578412 DGKEP52429 567 aa4.25□□□□□ -1.73
TOP2A-204ENST00000578412 LIMK1P53667 647 aa4.25□□□□□ -1.73
TOP2A-204ENST00000578412 KCNC3Q14003 757 aa4.25□□□□□ -1.73
TOP2A-204ENST00000578412 SMC1AQ14683 1233 aaKnown RBP4.25□□□□□ -1.73
TOP2A-204ENST00000578412 PTCHD3Q3KNS1 767 aa4.25□□□□□ -1.73
TOP2A-204ENST00000578412 PLA1AQ53H76 456 aa4.25□□□□□ -1.73
TOP2A-204ENST00000578412 IZUMO3Q5VZ72 239 aa4.25□□□□□ -1.73
TOP2A-204ENST00000578412 ZNF280DQ6N043 979 aa4.25□□□□□ -1.73
TOP2A-204ENST00000578412 ZSCAN25Q6NSZ9 544 aa4.25□□□□□ -1.73
TOP2A-204ENST00000578412 MZT2AQ6P582 158 aa4.25□□□□□ -1.73
TOP2A-204ENST00000578412 DCLRE1AQ6PJP8 1040 aa4.25□□□□□ -1.73
TOP2A-204ENST00000578412 CYP26C1Q6V0L0 522 aa4.25□□□□□ -1.73
TOP2A-204ENST00000578412 SEPT14Q6ZU15 432 aa4.25□□□□□ -1.73
TOP2A-204ENST00000578412 MAEAQ7L5Y9 396 aa4.25□□□□□ -1.73
TOP2A-204ENST00000578412 IZUMO1Q8IYV9 350 aa4.25□□□□□ -1.73
TOP2A-204ENST00000578412 GALNT16Q8N428 558 aa4.25□□□□□ -1.73
TOP2A-204ENST00000578412 MYCT1Q8N699 235 aa4.25□□□□□ -1.73
TOP2A-204ENST00000578412 C9orf106Q8NAJ2 232 aa4.25□□□□□ -1.73
TOP2A-204ENST00000578412 ZBTB44Q8NCP5 570 aa4.25□□□□□ -1.73
TOP2A-204ENST00000578412 NAV1Q8NEY1 1877 aa4.25□□□□□ -1.73
TOP2A-204ENST00000578412 SDR42E1Q8WUS8 393 aa4.25□□□□□ -1.73
TOP2A-204ENST00000578412 MRPS27Q92552 414 aaKnown RBP4.25□□□□□ -1.73
TOP2A-204ENST00000578412 PHKBQ93100 1093 aa4.25□□□□□ -1.73
TOP2A-204ENST00000578412 HELZ2Q9BYK8 2649 aaKnown RBP4.25□□□□□ -1.73
TOP2A-204ENST00000578412 VPS16Q9H269 839 aa4.25□□□□□ -1.73
TOP2A-204ENST00000578412 MTMR4Q9NYA4 1195 aa4.25□□□□□ -1.73
TOP2A-204ENST00000578412 STK39Q9UEW8 545 aa4.25□□□□□ -1.73
TOP2A-204ENST00000578412 ZNF215Q9UL58 517 aaPredicted RBP4.25□□□□□ -1.73
TOP2A-204ENST00000578412 MYH7BA7E2Y1 1941 aa4.25□□□□□ -1.73
TOP2A-204ENST00000578412 TTC3P53804 2025 aa4.24□□□□□ -1.73
TOP2A-204ENST00000578412 NRCAMQ92823 1304 aa4.24□□□□□ -1.73
TOP2A-204ENST00000578412 A0A087WWL8 130 aa4.24□□□□□ -1.73
TOP2A-204ENST00000578412 POC1B-GALNT4F8VUJ3 575 aa4.24□□□□□ -1.73
TOP2A-204ENST00000578412 ADAMTS3O15072 1205 aa4.24□□□□□ -1.73
TOP2A-204ENST00000578412 KPNA5O15131 536 aa4.24□□□□□ -1.73
TOP2A-204ENST00000578412 TOP3BO95985 862 aaKnown RBP4.24□□□□□ -1.73
TOP2A-204ENST00000578412 TSPY3P0CV98 308 aa4.24□□□□□ -1.73
TOP2A-204ENST00000578412 TSPY8P0CW00 308 aa4.24□□□□□ -1.73
TOP2A-204ENST00000578412 CYP2A6P11509 494 aaPredicted RBP4.24□□□□□ -1.73
TOP2A-204ENST00000578412 SCG2P13521 617 aa4.24□□□□□ -1.73
TOP2A-204ENST00000578412 MCCP23508 829 aa4.24□□□□□ -1.73
TOP2A-204ENST00000578412 CA8P35219 290 aa4.24□□□□□ -1.73
TOP2A-204ENST00000578412 ARFIP2P53365 341 aa4.24□□□□□ -1.73
TOP2A-204ENST00000578412 WNT3P56703 355 aa4.24□□□□□ -1.73
TOP2A-204ENST00000578412 STARD6P59095 220 aa4.24□□□□□ -1.73
TOP2A-204ENST00000578412 ARHGAP1Q07960 439 aa4.24□□□□□ -1.73
TOP2A-204ENST00000578412 PPFIA1Q13136 1202 aa4.24□□□□□ -1.73
TOP2A-204ENST00000578412 SLC13A2Q13183 592 aa4.24□□□□□ -1.73
TOP2A-204ENST00000578412 RAB32Q13637 225 aa4.24□□□□□ -1.73
TOP2A-204ENST00000578412 BLMHQ13867 455 aa4.24□□□□□ -1.73
TOP2A-204ENST00000578412 PTPN14Q15678 1187 aa4.24□□□□□ -1.73
TOP2A-204ENST00000578412 CYP1B1Q16678 543 aa4.24□□□□□ -1.73
TOP2A-204ENST00000578412 ALDH1L2Q3SY69 923 aa4.24□□□□□ -1.73
TOP2A-204ENST00000578412 AASDHQ4L235 1098 aaPredicted RBP4.24□□□□□ -1.73
TOP2A-204ENST00000578412 CCDC38Q502W7 563 aa4.24□□□□□ -1.73
TOP2A-204ENST00000578412 RARS2Q5T160 578 aaKnown RBP4.24□□□□□ -1.73
TOP2A-204ENST00000578412 PLPP4Q5VZY2 271 aa4.24□□□□□ -1.73
TOP2A-204ENST00000578412 MAATS1Q7Z4T9 603 aa4.24□□□□□ -1.73
TOP2A-204ENST00000578412 FAM9BQ8IZU0 186 aa4.24□□□□□ -1.73
TOP2A-204ENST00000578412 GALNT4Q8N4A0 578 aa4.24□□□□□ -1.73
TOP2A-204ENST00000578412 MRPL43Q8N983 215 aaKnown RBP4.24□□□□□ -1.73
TOP2A-204ENST00000578412 VN1R2Q8NFZ6 395 aa4.24□□□□□ -1.73
TOP2A-204ENST00000578412 IL31RAQ8NI17 732 aa4.24□□□□□ -1.73
TOP2A-204ENST00000578412 BPIFB1Q8TDL5 484 aa4.24□□□□□ -1.73
TOP2A-204ENST00000578412 KIAA1191Q96A73 305 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms