RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 RFX6Q8HWS3 928 aa22.44■■□□□ 1.18
SMARCD2-206ENST00000577990 KATNAL2Q8IYT4 538 aa22.44■■□□□ 1.18
SMARCD2-206ENST00000577990 PLD5Q8N7P1 536 aa22.44■■□□□ 1.18
SMARCD2-206ENST00000577990 ZNF830Q96NB3 372 aaPredicted RBP22.44■■□□□ 1.18
SMARCD2-206ENST00000577990 CNTNAP3BQ96NU0 1288 aa22.44■■□□□ 1.18
SMARCD2-206ENST00000577990 GTPBP2Q9BX10 602 aaKnown RBP22.44■■□□□ 1.18
SMARCD2-206ENST00000577990 CNTNAP3Q9BZ76 1288 aa22.44■■□□□ 1.18
SMARCD2-206ENST00000577990 ZDHHC5Q9C0B5 715 aa22.44■■□□□ 1.18
SMARCD2-206ENST00000577990 DTLQ9NZJ0 730 aa22.44■■□□□ 1.18
SMARCD2-206ENST00000577990 KCNK5O95279 499 aa22.43■■□□□ 1.18
SMARCD2-206ENST00000577990 ZFXP17010 805 aaPredicted RBP22.43■■□□□ 1.18
SMARCD2-206ENST00000577990 CSNK1EP49674 416 aaKnown RBP22.43■■□□□ 1.18
SMARCD2-206ENST00000577990 AP1S1P61966 158 aa22.43■■□□□ 1.18
SMARCD2-206ENST00000577990 KIF5AQ12840 1032 aa22.43■■□□□ 1.18
SMARCD2-206ENST00000577990 SLC10A2Q12908 348 aaPredicted RBP22.43■■□□□ 1.18
SMARCD2-206ENST00000577990 UAP1L1Q3KQV9 507 aa22.43■■□□□ 1.18
SMARCD2-206ENST00000577990 SETMARQ53H47 684 aaPredicted RBP22.43■■□□□ 1.18
SMARCD2-206ENST00000577990 N4BP2L1Q5TBK1 243 aaPredicted RBP22.43■■□□□ 1.18
SMARCD2-206ENST00000577990 MARC1Q5VT66 337 aa22.43■■□□□ 1.18
SMARCD2-206ENST00000577990 TIGD7Q6NT04 549 aaPredicted RBP22.43■■□□□ 1.18
SMARCD2-206ENST00000577990 PSAPL1Q6NUJ1 521 aa22.43■■□□□ 1.18
SMARCD2-206ENST00000577990 CCDC112Q8NEF3 446 aa22.43■■□□□ 1.18
SMARCD2-206ENST00000577990 HCAR2Q8TDS4 363 aa22.43■■□□□ 1.18
SMARCD2-206ENST00000577990 SERAC1Q96JX3 654 aa22.43■■□□□ 1.18
SMARCD2-206ENST00000577990 ZNF641Q96N77 438 aaPredicted RBP22.43■■□□□ 1.18
SMARCD2-206ENST00000577990 TSGA13Q96PP4 275 aa22.43■■□□□ 1.18
SMARCD2-206ENST00000577990 SUV39H2Q9H5I1 410 aa22.43■■□□□ 1.18
SMARCD2-206ENST00000577990 ATP13A3Q9H7F0 1226 aa22.43■■□□□ 1.18
SMARCD2-206ENST00000577990 DMTF1Q9Y222 760 aa22.43■■□□□ 1.18
SMARCD2-206ENST00000577990 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.43■■□□□ 1.18
SMARCD2-206ENST00000577990 CACNA1BQ00975 2339 aa22.42■■□□□ 1.18
SMARCD2-206ENST00000577990 DOCK9Q9BZ29 2069 aa22.42■■□□□ 1.18
SMARCD2-206ENST00000577990 ANKRD36A6QL64 1941 aa22.42■■□□□ 1.18
SMARCD2-206ENST00000577990 A0A1B0GVT2 93 aa22.42■■□□□ 1.18
SMARCD2-206ENST00000577990 TSPAN11A1L157 253 aa22.42■■□□□ 1.18
SMARCD2-206ENST00000577990 GOLGA6L3A6NEY3 463 aa22.42■■□□□ 1.18
SMARCD2-206ENST00000577990 GIPC1O14908 333 aa22.42■■□□□ 1.18
SMARCD2-206ENST00000577990 CCNCP24863 283 aa22.42■■□□□ 1.18
SMARCD2-206ENST00000577990 SERPINA4P29622 427 aa22.42■■□□□ 1.18
SMARCD2-206ENST00000577990 CDKN2BP42772 138 aa22.42■■□□□ 1.18
SMARCD2-206ENST00000577990 MMP13P45452 471 aa22.42■■□□□ 1.18
SMARCD2-206ENST00000577990 MARCKSL1P49006 195 aa22.42■■□□□ 1.18
SMARCD2-206ENST00000577990 SCNN1BP51168 640 aa22.42■■□□□ 1.18
SMARCD2-206ENST00000577990 HNRNPDQ14103 355 aaKnown RBP22.42■■□□□ 1.18
SMARCD2-206ENST00000577990 TAZQ16635 292 aa22.42■■□□□ 1.18
SMARCD2-206ENST00000577990 ZNF284Q2VY69 593 aa22.42■■□□□ 1.18
SMARCD2-206ENST00000577990 NAPEPLDQ6IQ20 393 aa22.42■■□□□ 1.18
SMARCD2-206ENST00000577990 KIAA1161Q6NSJ0 714 aa22.42■■□□□ 1.18
SMARCD2-206ENST00000577990 SPOCD1Q6ZMY3 1216 aa22.42■■□□□ 1.18
SMARCD2-206ENST00000577990 ADAT2Q7Z6V5 191 aaKnown RBP22.42■■□□□ 1.18
SMARCD2-206ENST00000577990 CAMK1DQ8IU85 385 aa22.42■■□□□ 1.18
SMARCD2-206ENST00000577990 PGBD5Q8N414 524 aa22.42■■□□□ 1.18
SMARCD2-206ENST00000577990 TEX26Q8N6G2 289 aa22.42■■□□□ 1.18
SMARCD2-206ENST00000577990 KRT35Q92764 455 aa22.42■■□□□ 1.18
SMARCD2-206ENST00000577990 FATE1Q969F0 183 aa22.42■■□□□ 1.18
SMARCD2-206ENST00000577990 HDAC11Q96DB2 347 aa22.42■■□□□ 1.18
SMARCD2-206ENST00000577990 MGME1Q9BQP7 344 aa22.42■■□□□ 1.18
SMARCD2-206ENST00000577990 AASDHPPTQ9NRN7 309 aa22.42■■□□□ 1.18
SMARCD2-206ENST00000577990 ZFR2Q9UPR6 939 aaKnown RBP22.42■■□□□ 1.18
SMARCD2-206ENST00000577990 TRPM6Q9BX84 2022 aa22.41■■□□□ 1.18
SMARCD2-206ENST00000577990 KNL1Q8NG31 2342 aa22.41■■□□□ 1.18
SMARCD2-206ENST00000577990 GRID2IPA4D2P6 1211 aa22.41■■□□□ 1.18
SMARCD2-206ENST00000577990 MATN3O15232 486 aa22.41■■□□□ 1.18
SMARCD2-206ENST00000577990 ARHGAP6O43182 974 aa22.41■■□□□ 1.18
SMARCD2-206ENST00000577990 TSPAN6O43657 245 aa22.41■■□□□ 1.18
SMARCD2-206ENST00000577990 GJB3O75712 270 aa22.41■■□□□ 1.18
SMARCD2-206ENST00000577990 TIMP2P16035 220 aa22.41■■□□□ 1.18
SMARCD2-206ENST00000577990 RPS21P63220 83 aaKnown RBP22.41■■□□□ 1.18
SMARCD2-206ENST00000577990 BNC1Q01954 994 aa22.41■■□□□ 1.18
SMARCD2-206ENST00000577990 BCL2L1Q07817 233 aa22.41■■□□□ 1.18
SMARCD2-206ENST00000577990 TMEM259Q4ZIN3 620 aa22.41■■□□□ 1.18
SMARCD2-206ENST00000577990 CFAP58Q5T655 872 aa22.41■■□□□ 1.18
SMARCD2-206ENST00000577990 SEL1L3Q68CR1 1132 aa22.41■■□□□ 1.18
SMARCD2-206ENST00000577990 LAYNQ6UX15 382 aa22.41■■□□□ 1.18
SMARCD2-206ENST00000577990 TTC7BQ86TV6 843 aa22.41■■□□□ 1.18
SMARCD2-206ENST00000577990 RCOR2Q8IZ40 523 aa22.41■■□□□ 1.18
SMARCD2-206ENST00000577990 MINDY1Q8N5J2 469 aa22.41■■□□□ 1.18
SMARCD2-206ENST00000577990 LRRC57Q8N9N7 239 aa22.41■■□□□ 1.18
SMARCD2-206ENST00000577990 KIAA1524Q8TCG1 905 aa22.41■■□□□ 1.18
SMARCD2-206ENST00000577990 MAML1Q92585 1016 aa22.41■■□□□ 1.18
SMARCD2-206ENST00000577990 FEM1CQ96JP0 617 aa22.41■■□□□ 1.18
SMARCD2-206ENST00000577990 TRIM10Q9UDY6 481 aa22.41■■□□□ 1.18
SMARCD2-206ENST00000577990 ITM2BQ9Y287 266 aa22.41■■□□□ 1.18
SMARCD2-206ENST00000577990 HEY1Q9Y5J3 304 aa22.41■■□□□ 1.18
SMARCD2-206ENST00000577990 FRYQ5TBA9 3013 aa22.4■■□□□ 1.18
SMARCD2-206ENST00000577990 A0A0U1RQJ8 604 aa22.4■■□□□ 1.18
SMARCD2-206ENST00000577990 MACROD2A1Z1Q3 448 aa22.4■■□□□ 1.18
SMARCD2-206ENST00000577990 NEMP1O14524 444 aa22.4■■□□□ 1.18
SMARCD2-206ENST00000577990 AREL1O15033 823 aa22.4■■□□□ 1.18
SMARCD2-206ENST00000577990 SPINT1O43278 529 aa22.4■■□□□ 1.18
SMARCD2-206ENST00000577990 ZRANB2O95218 330 aaKnown RBP eCLIP22.4■■□□□ 1.18
SMARCD2-206ENST00000577990 CR2P20023 1033 aa22.4■■□□□ 1.18
SMARCD2-206ENST00000577990 XPAP23025 273 aaPredicted RBP22.4■■□□□ 1.18
SMARCD2-206ENST00000577990 CTNNA1P35221 906 aaKnown RBP22.4■■□□□ 1.18
SMARCD2-206ENST00000577990 NOVA1P51513 510 aaKnown RBP22.4■■□□□ 1.18
SMARCD2-206ENST00000577990 SUOXP51687 545 aa22.4■■□□□ 1.18
SMARCD2-206ENST00000577990 DYNLT1P63172 113 aa22.4■■□□□ 1.18
SMARCD2-206ENST00000577990 TFDP2Q14188 446 aa22.4■■□□□ 1.18
SMARCD2-206ENST00000577990 LRRC73Q5JTD7 316 aa22.4■■□□□ 1.18
SMARCD2-206ENST00000577990 BRAT1Q6PJG6 821 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms