RNA–Protein interactions for RNA: ENST00000577572.5

SS18-206, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 510 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-206ENST00000577572 HECAQ9UBI9 543 aaPredicted RBP15.43■□□□□ 0.06
SS18-206ENST00000577572 SLCO3A1Q9UIG8 710 aa15.43■□□□□ 0.06
SS18-206ENST00000577572 RIMKLBQ9ULI2 386 aa15.43■□□□□ 0.06
SS18-206ENST00000577572 RAI2Q9Y5P3 530 aa15.43■□□□□ 0.06
SS18-206ENST00000577572 ACTL7AQ9Y615 435 aa15.43■□□□□ 0.06
SS18-206ENST00000577572 SHROOM3Q8TF72 1996 aa15.42■□□□□ 0.06
SS18-206ENST00000577572 EDDM13A0A1B0GTR0 161 aa15.42■□□□□ 0.06
SS18-206ENST00000577572 MAN2B1O00754 1011 aa15.42■□□□□ 0.06
SS18-206ENST00000577572 MAP2K7O14733 419 aa15.42■□□□□ 0.06
SS18-206ENST00000577572 RIPK2O43353 540 aa15.42■□□□□ 0.06
SS18-206ENST00000577572 CPP00450 1065 aa15.42■□□□□ 0.06
SS18-206ENST00000577572 NFKBIAP25963 317 aa15.42■□□□□ 0.06
SS18-206ENST00000577572 HSD17B3P37058 310 aa15.42■□□□□ 0.06
SS18-206ENST00000577572 GRIA4P48058 902 aa15.42■□□□□ 0.06
SS18-206ENST00000577572 STK19P49842 368 aaPredicted RBP15.42■□□□□ 0.06
SS18-206ENST00000577572 GALK1P51570 392 aa15.42■□□□□ 0.06
SS18-206ENST00000577572 HNRNPA1L2Q32P51 320 aaKnown RBP15.42■□□□□ 0.06
SS18-206ENST00000577572 ACCSLQ4AC99 568 aa15.42■□□□□ 0.06
SS18-206ENST00000577572 HSF5Q4G112 596 aaPredicted RBP15.42■□□□□ 0.06
SS18-206ENST00000577572 FBXO43Q4G163 708 aa15.42■□□□□ 0.06
SS18-206ENST00000577572 MSS51Q4VC12 460 aa15.42■□□□□ 0.06
SS18-206ENST00000577572 PCID2Q5JVF3 399 aa15.42■□□□□ 0.06
SS18-206ENST00000577572 DENND2CQ68D51 928 aa15.42■□□□□ 0.06
SS18-206ENST00000577572 LRIG3Q6UXM1 1119 aa15.42■□□□□ 0.06
SS18-206ENST00000577572 TRMT11Q7Z4G4 463 aaKnown RBP15.42■□□□□ 0.06
SS18-206ENST00000577572 PALM2Q8IXS6 379 aa15.42■□□□□ 0.06
SS18-206ENST00000577572 IQCKQ8N0W5 287 aa15.42■□□□□ 0.06
SS18-206ENST00000577572 NDUFAF2Q8N183 169 aa15.42■□□□□ 0.06
SS18-206ENST00000577572 OR2A12Q8NGT7 310 aa15.42■□□□□ 0.06
SS18-206ENST00000577572 STAMBPL1Q96FJ0 436 aa15.42■□□□□ 0.06
SS18-206ENST00000577572 TMEM245Q9H330 911 aa15.42■□□□□ 0.06
SS18-206ENST00000577572 SEMA4AQ9H3S1 761 aa15.42■□□□□ 0.06
SS18-206ENST00000577572 TRABDQ9H4I3 376 aa15.42■□□□□ 0.06
SS18-206ENST00000577572 NINJ2Q9NZG7 142 aa15.42■□□□□ 0.06
SS18-206ENST00000577572 UBP1Q9NZI7 540 aa15.42■□□□□ 0.06
SS18-206ENST00000577572 HACD3Q9P035 362 aa15.42■□□□□ 0.06
SS18-206ENST00000577572 SAMD15Q9P1V8 674 aa15.42■□□□□ 0.06
SS18-206ENST00000577572 FETUBQ9UGM5 382 aa15.42■□□□□ 0.06
SS18-206ENST00000577572 SZT2Q5T011 3432 aa15.41■□□□□ 0.06
SS18-206ENST00000577572 FAM237BA0A1B0GVD1 139 aa15.41■□□□□ 0.06
SS18-206ENST00000577572 PAPSS2O95340 614 aaPredicted RBP15.41■□□□□ 0.06
SS18-206ENST00000577572 AGTP01019 485 aa15.41■□□□□ 0.06
SS18-206ENST00000577572 POLBP06746 335 aa15.41■□□□□ 0.06
SS18-206ENST00000577572 ATXN1LP0C7T5 689 aaKnown RBP15.41■□□□□ 0.06
SS18-206ENST00000577572 PGAM1P18669 254 aa15.41■□□□□ 0.06
SS18-206ENST00000577572 SP100P23497 879 aaPredicted RBP15.41■□□□□ 0.06
SS18-206ENST00000577572 ADRA1DP25100 572 aa15.41■□□□□ 0.06
SS18-206ENST00000577572 ELK3P41970 407 aa15.41■□□□□ 0.06
SS18-206ENST00000577572 GRIA1P42261 906 aa15.41■□□□□ 0.06
SS18-206ENST00000577572 CCNHP51946 323 aaPredicted RBP15.41■□□□□ 0.06
SS18-206ENST00000577572 POLR2LP62875 67 aaKnown RBP15.41■□□□□ 0.06
SS18-206ENST00000577572 PDE1BQ01064 536 aa15.41■□□□□ 0.06
SS18-206ENST00000577572 KDSRQ06136 332 aa15.41■□□□□ 0.06
SS18-206ENST00000577572 GRSF1Q12849 480 aaKnown RBP eCLIP15.41■□□□□ 0.06
SS18-206ENST00000577572 SPARCL1Q14515 664 aa15.41■□□□□ 0.06
SS18-206ENST00000577572 IHHQ14623 411 aa15.41■□□□□ 0.06
SS18-206ENST00000577572 TMEM196Q5HYL7 178 aa15.41■□□□□ 0.06
SS18-206ENST00000577572 ARMC12Q5T9G4 340 aa15.41■□□□□ 0.06
SS18-206ENST00000577572 DSG4Q86SJ6 1040 aa15.41■□□□□ 0.06
SS18-206ENST00000577572 FBXO36Q8NEA4 188 aa15.41■□□□□ 0.06
SS18-206ENST00000577572 UBLCP1Q8WVY7 318 aaPredicted RBP15.41■□□□□ 0.06
SS18-206ENST00000577572 ECHDC3Q96DC8 303 aa15.41■□□□□ 0.06
SS18-206ENST00000577572 EXOC2Q96KP1 924 aa15.41■□□□□ 0.06
SS18-206ENST00000577572 PWWP2AQ96N64 755 aa15.41■□□□□ 0.06
SS18-206ENST00000577572 HEPHQ9BQS7 1158 aa15.41■□□□□ 0.06
SS18-206ENST00000577572 CCDC77Q9BR77 488 aa15.41■□□□□ 0.06
SS18-206ENST00000577572 KIFC1Q9BW19 673 aa15.41■□□□□ 0.06
SS18-206ENST00000577572 TM6SF2Q9BZW4 377 aa15.41■□□□□ 0.06
SS18-206ENST00000577572 FBRSQ9HAH7 460 aa15.41■□□□□ 0.06
SS18-206ENST00000577572 ZC3H7BQ9UGR2 993 aaKnown RBP15.41■□□□□ 0.06
SS18-206ENST00000577572 PIAS3Q9Y6X2 628 aa15.41■□□□□ 0.06
SS18-206ENST00000577572 A0A087WUV0 522 aaPredicted RBP15.4■□□□□ 0.06
SS18-206ENST00000577572 HEATR9A2RTY3 570 aa15.4■□□□□ 0.06
SS18-206ENST00000577572 ANKRD66B4E2M5 251 aa15.4■□□□□ 0.06
SS18-206ENST00000577572 F5H423 210 aaPredicted RBP15.4■□□□□ 0.06
SS18-206ENST00000577572 TRAFD1O14545 582 aaPredicted RBP15.4■□□□□ 0.06
SS18-206ENST00000577572 AVILO75366 819 aa15.4■□□□□ 0.06
SS18-206ENST00000577572 TCEA3O75764 348 aa15.4■□□□□ 0.06
SS18-206ENST00000577572 USP1O94782 785 aa15.4■□□□□ 0.06
SS18-206ENST00000577572 PGLSO95336 258 aa15.4■□□□□ 0.06
SS18-206ENST00000577572 PRLP01236 227 aa15.4■□□□□ 0.06
SS18-206ENST00000577572 PRNPP04156 253 aa15.4■□□□□ 0.06
SS18-206ENST00000577572 SUOXP51687 545 aa15.4■□□□□ 0.06
SS18-206ENST00000577572 SESN2P58004 480 aaPredicted RBP15.4■□□□□ 0.06
SS18-206ENST00000577572 ELAVL3Q14576 367 aaKnown RBP15.4■□□□□ 0.06
SS18-206ENST00000577572 ZNF234Q14588 700 aa15.4■□□□□ 0.06
SS18-206ENST00000577572 PCSK7Q16549 785 aa15.4■□□□□ 0.06
SS18-206ENST00000577572 KYNUQ16719 465 aa15.4■□□□□ 0.06
SS18-206ENST00000577572 FNDC3BQ53EP0 1204 aaKnown RBP15.4■□□□□ 0.06
SS18-206ENST00000577572 SIRPB2Q5JXA9 342 aa15.4■□□□□ 0.06
SS18-206ENST00000577572 SPANXN3Q5MJ09 141 aa15.4■□□□□ 0.06
SS18-206ENST00000577572 SYCP2LQ5T4T6 812 aa15.4■□□□□ 0.06
SS18-206ENST00000577572 ATXN7L2Q5T6C5 722 aaPredicted RBP15.4■□□□□ 0.06
SS18-206ENST00000577572 STEAP4Q687X5 459 aa15.4■□□□□ 0.06
SS18-206ENST00000577572 PKN3Q6P5Z2 889 aa15.4■□□□□ 0.06
SS18-206ENST00000577572 BRAT1Q6PJG6 821 aa15.4■□□□□ 0.06
SS18-206ENST00000577572 DPY19L3Q6ZPD9 716 aa15.4■□□□□ 0.06
SS18-206ENST00000577572 TMEM135Q86UB9 458 aa15.4■□□□□ 0.06
SS18-206ENST00000577572 TMIEQ8NEW7 156 aa15.4■□□□□ 0.06
SS18-206ENST00000577572 PPHLN1Q8NEY8 458 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms