RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 OTUD1Q5VV17 481 aaPredicted RBP13.54□□□□□ -0.24
COPS3-214ENST00000577246 TRIM65Q6PJ69 517 aa13.54□□□□□ -0.24
COPS3-214ENST00000577246 TTC7BQ86TV6 843 aa13.54□□□□□ -0.24
COPS3-214ENST00000577246 OR2AP1Q8NGE2 309 aa13.54□□□□□ -0.24
COPS3-214ENST00000577246 TIGD1Q96MW7 591 aa13.54□□□□□ -0.24
COPS3-214ENST00000577246 EPAS1Q99814 870 aa13.54□□□□□ -0.24
COPS3-214ENST00000577246 EDEM3Q9BZQ6 932 aa13.54□□□□□ -0.24
COPS3-214ENST00000577246 B3GNT4Q9C0J1 378 aa13.54□□□□□ -0.24
COPS3-214ENST00000577246 SLC25A18Q9H1K4 315 aa13.54□□□□□ -0.24
COPS3-214ENST00000577246 LRRN3Q9H3W5 708 aa13.54□□□□□ -0.24
COPS3-214ENST00000577246 AKAP7Q9P0M2 348 aaPredicted RBP13.54□□□□□ -0.24
COPS3-214ENST00000577246 PPARGC1AQ9UBK2 798 aaKnown RBP13.54□□□□□ -0.24
COPS3-214ENST00000577246 APEX2Q9UBZ4 518 aa13.54□□□□□ -0.24
COPS3-214ENST00000577246 COL27A1Q8IZC6 1860 aaPredicted RBP13.54□□□□□ -0.24
COPS3-214ENST00000577246 BECN2A8MW95 431 aa13.53□□□□□ -0.24
COPS3-214ENST00000577246 AREL1O15033 823 aa13.53□□□□□ -0.24
COPS3-214ENST00000577246 UGT2B4P06133 528 aa13.53□□□□□ -0.24
COPS3-214ENST00000577246 HGFP14210 728 aa13.53□□□□□ -0.24
COPS3-214ENST00000577246 SUOXP51687 545 aa13.53□□□□□ -0.24
COPS3-214ENST00000577246 CCL7P80098 99 aa13.53□□□□□ -0.24
COPS3-214ENST00000577246 NFKB2Q00653 900 aa13.53□□□□□ -0.24
COPS3-214ENST00000577246 MORC3Q14149 939 aa13.53□□□□□ -0.24
COPS3-214ENST00000577246 TBR1Q16650 682 aa13.53□□□□□ -0.24
COPS3-214ENST00000577246 PTPN20Q4JDL3 420 aa13.53□□□□□ -0.24
COPS3-214ENST00000577246 CCNJLQ8IV13 435 aa13.53□□□□□ -0.24
COPS3-214ENST00000577246 HID1Q8IV36 788 aa13.53□□□□□ -0.24
COPS3-214ENST00000577246 DRC7Q8IY82 874 aa13.53□□□□□ -0.24
COPS3-214ENST00000577246 MSANTD4Q8NCY6 345 aa13.53□□□□□ -0.24
COPS3-214ENST00000577246 OR6K2Q8NGY2 324 aa13.53□□□□□ -0.24
COPS3-214ENST00000577246 SHC3Q92529 594 aa13.53□□□□□ -0.24
COPS3-214ENST00000577246 ARHGEF2Q92974 986 aaKnown RBP13.53□□□□□ -0.24
COPS3-214ENST00000577246 KLHL32Q96NJ5 620 aa13.53□□□□□ -0.24
COPS3-214ENST00000577246 PDCL3Q9H2J4 239 aa13.53□□□□□ -0.24
COPS3-214ENST00000577246 ADNPQ9H2P0 1102 aa13.53□□□□□ -0.24
COPS3-214ENST00000577246 GDPD2Q9HCC8 539 aa13.53□□□□□ -0.24
COPS3-214ENST00000577246 ANLNQ9NQW6 1124 aa13.53□□□□□ -0.24
COPS3-214ENST00000577246 GEMIN8Q9NWZ8 242 aaKnown RBP13.53□□□□□ -0.24
COPS3-214ENST00000577246 GGT7Q9UJ14 662 aa13.53□□□□□ -0.24
COPS3-214ENST00000577246 APPL1Q9UKG1 709 aa13.53□□□□□ -0.24
COPS3-214ENST00000577246 CTNND2Q9UQB3 1225 aa13.53□□□□□ -0.24
COPS3-214ENST00000577246 ZDHHC9Q9Y397 364 aa13.53□□□□□ -0.24
COPS3-214ENST00000577246 SNX10Q9Y5X0 201 aa13.53□□□□□ -0.24
COPS3-214ENST00000577246 PIEZO2Q9H5I5 2752 aa13.53□□□□□ -0.24
COPS3-214ENST00000577246 A0A1W2PQM1 296 aa13.52□□□□□ -0.25
COPS3-214ENST00000577246 ZSCAN5CA6NGD5 496 aaPredicted RBP13.52□□□□□ -0.25
COPS3-214ENST00000577246 I6L893 689 aaPredicted RBP13.52□□□□□ -0.25
COPS3-214ENST00000577246 MMP20O60882 483 aa13.52□□□□□ -0.25
COPS3-214ENST00000577246 CD44P16070 742 aaKnown RBP13.52□□□□□ -0.25
COPS3-214ENST00000577246 PNLIPP16233 465 aa13.52□□□□□ -0.25
COPS3-214ENST00000577246 GLB1P16278 677 aa13.52□□□□□ -0.25
COPS3-214ENST00000577246 XPAP23025 273 aaPredicted RBP13.52□□□□□ -0.25
COPS3-214ENST00000577246 MAPKAPK2P49137 400 aa13.52□□□□□ -0.25
COPS3-214ENST00000577246 BPIFB4P59827 614 aa13.52□□□□□ -0.25
COPS3-214ENST00000577246 TLE1Q04724 770 aa13.52□□□□□ -0.25
COPS3-214ENST00000577246 ELP6Q0PNE2 266 aa13.52□□□□□ -0.25
COPS3-214ENST00000577246 PAK1Q13153 545 aa13.52□□□□□ -0.25
COPS3-214ENST00000577246 LRRC14Q15048 493 aa13.52□□□□□ -0.25
COPS3-214ENST00000577246 KLHL40Q2TBA0 621 aa13.52□□□□□ -0.25
COPS3-214ENST00000577246 MYLK3Q32MK0 819 aa13.52□□□□□ -0.25
COPS3-214ENST00000577246 FAM102AQ5T9C2 384 aaPredicted RBP13.52□□□□□ -0.25
COPS3-214ENST00000577246 ISM2Q6H9L7 571 aa13.52□□□□□ -0.25
COPS3-214ENST00000577246 GDPD4Q6W3E5 623 aa13.52□□□□□ -0.25
COPS3-214ENST00000577246 GBP6Q6ZN66 633 aa13.52□□□□□ -0.25
COPS3-214ENST00000577246 ELOA2Q8IYF1 753 aaPredicted RBP13.52□□□□□ -0.25
COPS3-214ENST00000577246 TP53I13Q8NBR0 393 aaPredicted RBP13.52□□□□□ -0.25
COPS3-214ENST00000577246 TMEM35BQ8NCS4 154 aa13.52□□□□□ -0.25
COPS3-214ENST00000577246 GDAP1L1Q96MZ0 367 aa13.52□□□□□ -0.25
COPS3-214ENST00000577246 TBCBQ99426 244 aa13.52□□□□□ -0.25
COPS3-214ENST00000577246 ANKMY1Q9P2S6 941 aa13.52□□□□□ -0.25
COPS3-214ENST00000577246 ZNF212Q9UDV6 495 aa13.52□□□□□ -0.25
COPS3-214ENST00000577246 RABGEF1Q9UJ41 708 aa13.52□□□□□ -0.25
COPS3-214ENST00000577246 MAN1B1Q9UKM7 699 aa13.52□□□□□ -0.25
COPS3-214ENST00000577246 PNMA8BQ9ULN7 279 aaPredicted RBP13.52□□□□□ -0.25
COPS3-214ENST00000577246 TDRD6O60522 2096 aaKnown RBP13.52□□□□□ -0.25
COPS3-214ENST00000577246 DOCK9Q9BZ29 2069 aa13.52□□□□□ -0.25
COPS3-214ENST00000577246 TRPM6Q9BX84 2022 aa13.51□□□□□ -0.25
COPS3-214ENST00000577246 PRAMEF33A0A0G2JMD5 474 aa13.51□□□□□ -0.25
COPS3-214ENST00000577246 CASC3O15234 703 aaKnown RBP13.51□□□□□ -0.25
COPS3-214ENST00000577246 ZW10O43264 779 aa13.51□□□□□ -0.25
COPS3-214ENST00000577246 PRAMEF10O60809 474 aa13.51□□□□□ -0.25
COPS3-214ENST00000577246 TFE3P19532 575 aaPredicted RBP13.51□□□□□ -0.25
COPS3-214ENST00000577246 GKP32189 559 aa13.51□□□□□ -0.25
COPS3-214ENST00000577246 ATP1A2P50993 1020 aa13.51□□□□□ -0.25
COPS3-214ENST00000577246 SRP54P61011 504 aaKnown RBP13.51□□□□□ -0.25
COPS3-214ENST00000577246 ZFP36L1Q07352 338 aaKnown RBP13.51□□□□□ -0.25
COPS3-214ENST00000577246 NFATC4Q14934 902 aa13.51□□□□□ -0.25
COPS3-214ENST00000577246 IRF4Q15306 451 aa13.51□□□□□ -0.25
COPS3-214ENST00000577246 EXOC3L4Q17RC7 722 aa13.51□□□□□ -0.25
COPS3-214ENST00000577246 ALG11Q2TAA5 492 aa13.51□□□□□ -0.25
COPS3-214ENST00000577246 GJB7Q6PEY0 223 aa13.51□□□□□ -0.25
COPS3-214ENST00000577246 ENPP7Q6UWV6 458 aa13.51□□□□□ -0.25
COPS3-214ENST00000577246 CASKIN2Q8WXE0 1202 aa13.51□□□□□ -0.25
COPS3-214ENST00000577246 C18orf8Q96DM3 657 aa13.51□□□□□ -0.25
COPS3-214ENST00000577246 CRACR2AQ9BSW2 395 aa13.51□□□□□ -0.25
COPS3-214ENST00000577246 MAGEH1Q9H213 219 aa13.51□□□□□ -0.25
COPS3-214ENST00000577246 MBNL1Q9NR56 388 aaKnown RBP13.51□□□□□ -0.25
COPS3-214ENST00000577246 DKK3Q9UBP4 350 aa13.51□□□□□ -0.25
COPS3-214ENST00000577246 KLQ9UEF7 1012 aa13.51□□□□□ -0.25
COPS3-214ENST00000577246 UBR5O95071 2799 aaPredicted RBP13.51□□□□□ -0.25
COPS3-214ENST00000577246 GTPBP10A4D1E9 387 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms