RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 ITPR2Q14571 2701 aa9.12□□□□□ -0.95
SMG6-218ENST00000575454 ARID1BQ8NFD5 2236 aaPredicted RBP9.12□□□□□ -0.95
SMG6-218ENST00000575454 PRAMEF33A0A0G2JMD5 474 aa9.12□□□□□ -0.95
SMG6-218ENST00000575454 A0A1W2PQM1 296 aa9.12□□□□□ -0.95
SMG6-218ENST00000575454 BICDL2A1A5D9 508 aa9.12□□□□□ -0.95
SMG6-218ENST00000575454 TRIM49BA6NDI0 452 aa9.12□□□□□ -0.95
SMG6-218ENST00000575454 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.12□□□□□ -0.95
SMG6-218ENST00000575454 STMND1H3BQB6 276 aa9.12□□□□□ -0.95
SMG6-218ENST00000575454 AREL1O15033 823 aa9.12□□□□□ -0.95
SMG6-218ENST00000575454 PRAMEF10O60809 474 aa9.12□□□□□ -0.95
SMG6-218ENST00000575454 SRGAP2O75044 1071 aa9.12□□□□□ -0.95
SMG6-218ENST00000575454 GSRP00390 522 aa9.12□□□□□ -0.95
SMG6-218ENST00000575454 HGFP14210 728 aa9.12□□□□□ -0.95
SMG6-218ENST00000575454 GLB1P16278 677 aa9.12□□□□□ -0.95
SMG6-218ENST00000575454 KRT9P35527 623 aa9.12□□□□□ -0.95
SMG6-218ENST00000575454 USP8P40818 1118 aa9.12□□□□□ -0.95
SMG6-218ENST00000575454 ABL2P42684 1182 aa9.12□□□□□ -0.95
SMG6-218ENST00000575454 ATP1A2P50993 1020 aa9.12□□□□□ -0.95
SMG6-218ENST00000575454 SNRPD1P62314 119 aaKnown RBP9.12□□□□□ -0.95
SMG6-218ENST00000575454 GNA12Q03113 381 aa9.12□□□□□ -0.95
SMG6-218ENST00000575454 PTK2Q05397 1052 aa9.12□□□□□ -0.95
SMG6-218ENST00000575454 DEUP1Q05D60 604 aa9.12□□□□□ -0.95
SMG6-218ENST00000575454 RAD51Q06609 339 aa9.12□□□□□ -0.95
SMG6-218ENST00000575454 ZFP36L1Q07352 338 aaKnown RBP9.12□□□□□ -0.95
SMG6-218ENST00000575454 LRRC14Q15048 493 aa9.12□□□□□ -0.95
SMG6-218ENST00000575454 CLPPQ16740 277 aaPredicted RBP9.12□□□□□ -0.95
SMG6-218ENST00000575454 MYLK3Q32MK0 819 aa9.12□□□□□ -0.95
SMG6-218ENST00000575454 SLC25A52Q3SY17 297 aa9.12□□□□□ -0.95
SMG6-218ENST00000575454 DTX1Q86Y01 620 aa9.12□□□□□ -0.95
SMG6-218ENST00000575454 CCNJLQ8IV13 435 aa9.12□□□□□ -0.95
SMG6-218ENST00000575454 HID1Q8IV36 788 aa9.12□□□□□ -0.95
SMG6-218ENST00000575454 TRIM59Q8IWR1 403 aa9.12□□□□□ -0.95
SMG6-218ENST00000575454 WDTC1Q8N5D0 677 aa9.12□□□□□ -0.95
SMG6-218ENST00000575454 KYQ8NBH2 561 aa9.12□□□□□ -0.95
SMG6-218ENST00000575454 OR2AP1Q8NGE2 309 aa9.12□□□□□ -0.95
SMG6-218ENST00000575454 PCDH19Q8TAB3 1148 aa9.12□□□□□ -0.95
SMG6-218ENST00000575454 ZNF564Q8TBZ8 553 aaPredicted RBP9.12□□□□□ -0.95
SMG6-218ENST00000575454 NT5C3BQ969T7 300 aa9.12□□□□□ -0.95
SMG6-218ENST00000575454 NPY6RQ99463 290 aa9.12□□□□□ -0.95
SMG6-218ENST00000575454 ZYG11BQ9C0D3 744 aa9.12□□□□□ -0.95
SMG6-218ENST00000575454 GOLPH3LQ9H4A5 285 aa9.12□□□□□ -0.95
SMG6-218ENST00000575454 MPP6Q9NZW5 540 aa9.12□□□□□ -0.95
SMG6-218ENST00000575454 SIRPGQ9P1W8 387 aa9.12□□□□□ -0.95
SMG6-218ENST00000575454 FCF1Q9Y324 198 aaKnown RBP9.12□□□□□ -0.95
SMG6-218ENST00000575454 GOLGA6L4A6NEF3 574 aa9.11□□□□□ -0.95
SMG6-218ENST00000575454 ZSCAN5CA6NGD5 496 aaPredicted RBP9.11□□□□□ -0.95
SMG6-218ENST00000575454 KRIT1O00522 736 aa9.11□□□□□ -0.95
SMG6-218ENST00000575454 MMP20O60882 483 aa9.11□□□□□ -0.95
SMG6-218ENST00000575454 FGFR1OPO95684 399 aaKnown RBP9.11□□□□□ -0.95
SMG6-218ENST00000575454 TNFP01375 233 aa9.11□□□□□ -0.95
SMG6-218ENST00000575454 ERBB2P04626 1255 aa9.11□□□□□ -0.95
SMG6-218ENST00000575454 UGT2B4P06133 528 aa9.11□□□□□ -0.95
SMG6-218ENST00000575454 IGFALSP35858 605 aa9.11□□□□□ -0.95
SMG6-218ENST00000575454 SCNN1AP37088 669 aa9.11□□□□□ -0.95
SMG6-218ENST00000575454 SULT1E1P49888 294 aa9.11□□□□□ -0.95
SMG6-218ENST00000575454 MARSP56192 900 aaKnown RBP9.11□□□□□ -0.95
SMG6-218ENST00000575454 SRP54P61011 504 aaKnown RBP9.11□□□□□ -0.95
SMG6-218ENST00000575454 ARF5P84085 180 aa9.11□□□□□ -0.95
SMG6-218ENST00000575454 ELP6Q0PNE2 266 aa9.11□□□□□ -0.95
SMG6-218ENST00000575454 ARHGEF7Q14155 803 aa9.11□□□□□ -0.95
SMG6-218ENST00000575454 NFATC4Q14934 902 aa9.11□□□□□ -0.95
SMG6-218ENST00000575454 CERCAMQ5T4B2 595 aa9.11□□□□□ -0.95
SMG6-218ENST00000575454 ENPP7Q6UWV6 458 aa9.11□□□□□ -0.95
SMG6-218ENST00000575454 GDPD4Q6W3E5 623 aa9.11□□□□□ -0.95
SMG6-218ENST00000575454 VASH2Q86V25 355 aa9.11□□□□□ -0.95
SMG6-218ENST00000575454 ZFAND4Q86XD8 727 aa9.11□□□□□ -0.95
SMG6-218ENST00000575454 Q8N9G6 341 aaPredicted RBP9.11□□□□□ -0.95
SMG6-218ENST00000575454 GPBAR1Q8TDU6 330 aa9.11□□□□□ -0.95
SMG6-218ENST00000575454 ARHGEF2Q92974 986 aaKnown RBP9.11□□□□□ -0.95
SMG6-218ENST00000575454 USP7Q93009 1102 aa9.11□□□□□ -0.95
SMG6-218ENST00000575454 CATSPER2Q96P56 530 aa9.11□□□□□ -0.95
SMG6-218ENST00000575454 EPAS1Q99814 870 aa9.11□□□□□ -0.95
SMG6-218ENST00000575454 TM6SF2Q9BZW4 377 aa9.11□□□□□ -0.95
SMG6-218ENST00000575454 DKK3Q9UBP4 350 aa9.11□□□□□ -0.95
SMG6-218ENST00000575454 KLQ9UEF7 1012 aa9.11□□□□□ -0.95
SMG6-218ENST00000575454 RABGEF1Q9UJ41 708 aa9.11□□□□□ -0.95
SMG6-218ENST00000575454 ANAPC2Q9UJX6 822 aa9.11□□□□□ -0.95
SMG6-218ENST00000575454 ITM2BQ9Y287 266 aa9.11□□□□□ -0.95
SMG6-218ENST00000575454 DGKBQ9Y6T7 804 aa9.11□□□□□ -0.95
SMG6-218ENST00000575454 DOPEY1Q5JWR5 2465 aa9.1□□□□□ -0.95
SMG6-218ENST00000575454 HGSO14964 777 aaPredicted RBP9.1□□□□□ -0.95
SMG6-218ENST00000575454 CAPN5O15484 640 aaPredicted RBP9.1□□□□□ -0.95
SMG6-218ENST00000575454 NUDT21O43809 227 aaKnown RBP9.1□□□□□ -0.95
SMG6-218ENST00000575454 CR2P20023 1033 aa9.1□□□□□ -0.95
SMG6-218ENST00000575454 XPAP23025 273 aaPredicted RBP9.1□□□□□ -0.95
SMG6-218ENST00000575454 KELP23276 732 aa9.1□□□□□ -0.95
SMG6-218ENST00000575454 CASRP41180 1078 aa9.1□□□□□ -0.95
SMG6-218ENST00000575454 CCR10P46092 362 aa9.1□□□□□ -0.95
SMG6-218ENST00000575454 MAPKAPK2P49137 400 aa9.1□□□□□ -0.95
SMG6-218ENST00000575454 MAPK10P53779 464 aa9.1□□□□□ -0.95
SMG6-218ENST00000575454 BPIFB4P59827 614 aa9.1□□□□□ -0.95
SMG6-218ENST00000575454 RNASE9P60153 205 aaKnown RBP9.1□□□□□ -0.95
SMG6-218ENST00000575454 FOXK1P85037 733 aa9.1□□□□□ -0.95
SMG6-218ENST00000575454 SRSF6Q13247 344 aaKnown RBP9.1□□□□□ -0.95
SMG6-218ENST00000575454 KCNAB2Q13303 367 aa9.1□□□□□ -0.95
SMG6-218ENST00000575454 CLCA4Q14CN2 919 aa9.1□□□□□ -0.95
SMG6-218ENST00000575454 ALG11Q2TAA5 492 aa9.1□□□□□ -0.95
SMG6-218ENST00000575454 KLHL40Q2TBA0 621 aa9.1□□□□□ -0.95
SMG6-218ENST00000575454 PHF19Q5T6S3 580 aa9.1□□□□□ -0.95
SMG6-218ENST00000575454 OTUD1Q5VV17 481 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms