RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 WDTC1Q8N5D0 677 aa9.67□□□□□ -0.86
CCDC40-212ENST00000574799 UBA3Q8TBC4 463 aa9.67□□□□□ -0.86
CCDC40-212ENST00000574799 SMOXQ9NWM0 555 aa9.67□□□□□ -0.86
CCDC40-212ENST00000574799 C16orf96A6NNT2 1141 aa9.67□□□□□ -0.86
CCDC40-212ENST00000574799 SOCS2O14508 198 aa9.67□□□□□ -0.86
CCDC40-212ENST00000574799 SNPHO15079 494 aa9.67□□□□□ -0.86
CCDC40-212ENST00000574799 IGHA2P01877 340 aa9.67□□□□□ -0.86
CCDC40-212ENST00000574799 SLC7A1P30825 629 aa9.67□□□□□ -0.86
CCDC40-212ENST00000574799 RGS7P49802 495 aa9.67□□□□□ -0.86
CCDC40-212ENST00000574799 SEPHS1P49903 392 aa9.67□□□□□ -0.86
CCDC40-212ENST00000574799 LAMTOR4Q0VGL1 99 aa9.67□□□□□ -0.86
CCDC40-212ENST00000574799 CYP51A1Q16850 503 aa9.67□□□□□ -0.86
CCDC40-212ENST00000574799 PTPN20Q4JDL3 420 aa9.67□□□□□ -0.86
CCDC40-212ENST00000574799 SULF1Q8IWU6 871 aa9.67□□□□□ -0.86
CCDC40-212ENST00000574799 CLIP4Q8N3C7 705 aa9.67□□□□□ -0.86
CCDC40-212ENST00000574799 Q8N9G6 341 aaPredicted RBP9.67□□□□□ -0.86
CCDC40-212ENST00000574799 TMEM102Q8N9M5 508 aaPredicted RBP9.67□□□□□ -0.86
CCDC40-212ENST00000574799 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.67□□□□□ -0.86
CCDC40-212ENST00000574799 SHCBP1Q8NEM2 672 aa9.67□□□□□ -0.86
CCDC40-212ENST00000574799 GLT1D1Q96MS3 346 aa9.67□□□□□ -0.86
CCDC40-212ENST00000574799 SLC39A3Q9BRY0 314 aa9.67□□□□□ -0.86
CCDC40-212ENST00000574799 MTMR12Q9C0I1 747 aa9.67□□□□□ -0.86
CCDC40-212ENST00000574799 CYP4F12Q9HCS2 524 aa9.67□□□□□ -0.86
CCDC40-212ENST00000574799 PNPLA8Q9NP80 782 aa9.67□□□□□ -0.86
CCDC40-212ENST00000574799 SFMBT1Q9UHJ3 866 aa9.67□□□□□ -0.86
CCDC40-212ENST00000574799 ERVK-11Q9UQG0 969 aa9.67□□□□□ -0.86
CCDC40-212ENST00000574799 NR2E3Q9Y5X4 410 aa9.67□□□□□ -0.86
CCDC40-212ENST00000574799 DHRS12A0PJE2 317 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 FAM159BA6NKW6 160 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 GNGT2O14610 69 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 UBDO15205 165 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 IDH3BO43837 385 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 C22orf31O95567 290 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 TNNC2P02585 160 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 CD1EP15812 388 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 GPD1P21695 349 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 ALDH4A1P30038 563 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 PRKAA2P54646 552 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 COPZ1P61923 177 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 MBTD1Q05BQ5 628 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 STILQ15468 1287 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 BROXQ5VW32 411 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 IQSEC1Q6DN90 963 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 CCDC81Q6ZN84 652 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 PCYOX1LQ8NBM8 494 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 HDAC11Q96DB2 347 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 COQ7Q99807 217 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 ACE2Q9BYF1 805 aaPredicted RBP9.66□□□□□ -0.86
CCDC40-212ENST00000574799 NIF3L1Q9GZT8 377 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 BFARQ9NZS9 450 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 CPSF3Q9UKF6 684 aaKnown RBP9.66□□□□□ -0.86
CCDC40-212ENST00000574799 RUVBL2Q9Y230 463 aaKnown RBP9.66□□□□□ -0.86
CCDC40-212ENST00000574799 PSAT1Q9Y617 370 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 EI24O14681 340 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 ANGPT2O15123 496 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 PAPSS1O43252 624 aaPredicted RBP9.66□□□□□ -0.86
CCDC40-212ENST00000574799 USP12O75317 370 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 SNAI1O95863 264 aaPredicted RBP9.66□□□□□ -0.86
CCDC40-212ENST00000574799 HDCP19113 662 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 SDC4P31431 198 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 SLFN12LQ6IEE8 588 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 DHRS4L2Q6PKH6 230 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 PLPPR4Q7Z2D5 763 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 PID1Q7Z2X4 250 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 SPPL2CQ8IUH8 684 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 POC5Q8NA72 575 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 NETO2Q8NC67 525 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 RXFP2Q8WXD0 754 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 C16orf70Q9BSU1 422 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 NPLQ9BXD5 320 aaPredicted RBP9.66□□□□□ -0.86
CCDC40-212ENST00000574799 ANKRD60Q9BZ19 345 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 ZNF518BQ9C0D4 1074 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 WDR12Q9GZL7 423 aaKnown RBP9.66□□□□□ -0.86
CCDC40-212ENST00000574799 PIF1Q9H611 641 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 KLHL8Q9P2G9 620 aaPredicted RBP9.66□□□□□ -0.86
CCDC40-212ENST00000574799 PTBP2Q9UKA9 531 aaKnown RBP9.66□□□□□ -0.86
CCDC40-212ENST00000574799 PSME2Q9UL46 239 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 NOX1Q9Y5S8 564 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 CSADQ9Y600 493 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 TRPC5OSA6NMA1 111 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 TK2O00142 265 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 NADKO95544 446 aaPredicted RBP9.66□□□□□ -0.86
CCDC40-212ENST00000574799 METTL18O95568 372 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 TRUB2O95900 331 aaKnown RBP9.66□□□□□ -0.86
CCDC40-212ENST00000574799 LTFP02788 710 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 OPRL1P41146 370 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 RAP1GAPP47736 663 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 SLC10A2Q12908 348 aaPredicted RBP9.66□□□□□ -0.86
CCDC40-212ENST00000574799 IMPG1Q17R60 797 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 PRR23BQ6ZRT6 265 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 DDIASQ8IXT1 998 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 SEPT8Q92599 483 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 ZNF668Q96K58 619 aaPredicted RBP9.66□□□□□ -0.86
CCDC40-212ENST00000574799 RNF157Q96PX1 679 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 FZD8Q9H461 694 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 TRIM39Q9HCM9 518 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 CYTH4Q9UIA0 394 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 MOSPD1Q9UJG1 213 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 OAZ3Q9UMX2 235 aa9.66□□□□□ -0.86
CCDC40-212ENST00000574799 TSC2P49815 1807 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms