RNA–Protein interactions for RNA: ENST00000574109.5

NDE1-209, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-209ENST00000574109 NELL1Q92832 810 aa13.71□□□□□ -0.21
NDE1-209ENST00000574109 SLCO2A1Q92959 643 aa13.71□□□□□ -0.21
NDE1-209ENST00000574109 FAM131CQ96AQ9 280 aa13.71□□□□□ -0.21
NDE1-209ENST00000574109 IMP4Q96G21 291 aaKnown RBP13.71□□□□□ -0.21
NDE1-209ENST00000574109 FCRL5Q96RD9 977 aa13.71□□□□□ -0.21
NDE1-209ENST00000574109 OMDQ99983 421 aa13.71□□□□□ -0.21
NDE1-209ENST00000574109 FAM118BQ9BPY3 351 aa13.71□□□□□ -0.21
NDE1-209ENST00000574109 PCED1AQ9H1Q7 454 aa13.71□□□□□ -0.21
NDE1-209ENST00000574109 KDM4CQ9H3R0 1056 aa13.71□□□□□ -0.21
NDE1-209ENST00000574109 MTG2Q9H4K7 406 aa13.71□□□□□ -0.21
NDE1-209ENST00000574109 USP29Q9HBJ7 922 aa13.71□□□□□ -0.21
NDE1-209ENST00000574109 PCDH9Q9HC56 1237 aa13.71□□□□□ -0.21
NDE1-209ENST00000574109 ZSCAN32Q9NX65 697 aa13.71□□□□□ -0.21
NDE1-209ENST00000574109 PAK5Q9P286 719 aa13.71□□□□□ -0.21
NDE1-209ENST00000574109 EVLQ9UI08 416 aaPredicted RBP13.71□□□□□ -0.21
NDE1-209ENST00000574109 AAR2Q9Y312 384 aaKnown RBP13.71□□□□□ -0.21
NDE1-209ENST00000574109 ARIH1Q9Y4X5 557 aaPredicted RBP13.71□□□□□ -0.21
NDE1-209ENST00000574109 PCDHGA2Q9Y5H1 932 aa13.71□□□□□ -0.21
NDE1-209ENST00000574109 TRPM6Q9BX84 2022 aa13.71□□□□□ -0.22
NDE1-209ENST00000574109 THADAQ6YHU6 1953 aa13.71□□□□□ -0.22
NDE1-209ENST00000574109 MUC6Q6W4X9 2439 aa13.7□□□□□ -0.22
NDE1-209ENST00000574109 TNRC6BQ9UPQ9 1833 aaKnown RBP13.7□□□□□ -0.22
NDE1-209ENST00000574109 ERI2A8K979 691 aaKnown RBP13.7□□□□□ -0.22
NDE1-209ENST00000574109 MID1O15344 667 aa13.7□□□□□ -0.22
NDE1-209ENST00000574109 HTRA2O43464 458 aaPredicted RBP13.7□□□□□ -0.22
NDE1-209ENST00000574109 CTSLP07711 333 aa13.7□□□□□ -0.22
NDE1-209ENST00000574109 SLC8A1P32418 973 aa13.7□□□□□ -0.22
NDE1-209ENST00000574109 FDFT1P37268 417 aa13.7□□□□□ -0.22
NDE1-209ENST00000574109 RGRP47804 291 aa13.7□□□□□ -0.22
NDE1-209ENST00000574109 GEMP55040 296 aa13.7□□□□□ -0.22
NDE1-209ENST00000574109 MAXP61244 160 aa13.7□□□□□ -0.22
NDE1-209ENST00000574109 CSTF1Q05048 431 aaKnown RBP13.7□□□□□ -0.22
NDE1-209ENST00000574109 ELP6Q0PNE2 266 aa13.7□□□□□ -0.22
NDE1-209ENST00000574109 ARSIQ5FYB1 569 aa13.7□□□□□ -0.22
NDE1-209ENST00000574109 SLC36A4Q6YBV0 504 aa13.7□□□□□ -0.22
NDE1-209ENST00000574109 SYDE1Q6ZW31 735 aaPredicted RBP13.7□□□□□ -0.22
NDE1-209ENST00000574109 PID1Q7Z2X4 250 aa13.7□□□□□ -0.22
NDE1-209ENST00000574109 PAF1Q8N7H5 531 aa13.7□□□□□ -0.22
NDE1-209ENST00000574109 CNTD1Q8N815 330 aa13.7□□□□□ -0.22
NDE1-209ENST00000574109 FAM71DQ8N9W8 422 aa13.7□□□□□ -0.22
NDE1-209ENST00000574109 CHST14Q8NCH0 376 aa13.7□□□□□ -0.22
NDE1-209ENST00000574109 MNS1Q8NEH6 495 aa13.7□□□□□ -0.22
NDE1-209ENST00000574109 OR6K2Q8NGY2 324 aa13.7□□□□□ -0.22
NDE1-209ENST00000574109 ZNF592Q92610 1267 aa13.7□□□□□ -0.22
NDE1-209ENST00000574109 ECHDC3Q96DC8 303 aa13.7□□□□□ -0.22
NDE1-209ENST00000574109 AP1M1Q9BXS5 423 aa13.7□□□□□ -0.22
NDE1-209ENST00000574109 TDRD1Q9BXT4 1180 aaKnown RBP13.7□□□□□ -0.22
NDE1-209ENST00000574109 ADGRE3Q9BY15 652 aa13.7□□□□□ -0.22
NDE1-209ENST00000574109 SUV39H2Q9H5I1 410 aa13.7□□□□□ -0.22
NDE1-209ENST00000574109 SGK2Q9HBY8 427 aa13.7□□□□□ -0.22
NDE1-209ENST00000574109 NOD2Q9HC29 1040 aa13.7□□□□□ -0.22
NDE1-209ENST00000574109 C2orf42Q9NWW7 574 aa13.7□□□□□ -0.22
NDE1-209ENST00000574109 PCYOX1Q9UHG3 505 aa13.7□□□□□ -0.22
NDE1-209ENST00000574109 FAM153AQ9UHL3 310 aa13.7□□□□□ -0.22
NDE1-209ENST00000574109 PLXNA2O75051 1894 aa13.7□□□□□ -0.22
NDE1-209ENST00000574109 LRRK1Q38SD2 2015 aa13.69□□□□□ -0.22
NDE1-209ENST00000574109 SCN8AQ9UQD0 1980 aa13.69□□□□□ -0.22
NDE1-209ENST00000574109 NUMA1Q14980 2115 aa13.69□□□□□ -0.22
NDE1-209ENST00000574109 NDC80O14777 642 aa13.69□□□□□ -0.22
NDE1-209ENST00000574109 PSMD3O43242 534 aa13.69□□□□□ -0.22
NDE1-209ENST00000574109 AP1G1O43747 822 aa13.69□□□□□ -0.22
NDE1-209ENST00000574109 RNASEH2AO75792 299 aaKnown RBP13.69□□□□□ -0.22
NDE1-209ENST00000574109 URI1O94763 535 aaPredicted RBP13.69□□□□□ -0.22
NDE1-209ENST00000574109 ECEL1O95672 775 aa13.69□□□□□ -0.22
NDE1-209ENST00000574109 CPP00450 1065 aa13.69□□□□□ -0.22
NDE1-209ENST00000574109 IFNB1P01574 187 aa13.69□□□□□ -0.22
NDE1-209ENST00000574109 NFKB1P19838 968 aa13.69□□□□□ -0.22
NDE1-209ENST00000574109 XPAP23025 273 aaPredicted RBP13.69□□□□□ -0.22
NDE1-209ENST00000574109 COILP38432 576 aaPredicted RBP13.69□□□□□ -0.22
NDE1-209ENST00000574109 P2RY2P41231 377 aa13.69□□□□□ -0.22
NDE1-209ENST00000574109 CD86P42081 329 aa13.69□□□□□ -0.22
NDE1-209ENST00000574109 GRIA4P48058 902 aa13.69□□□□□ -0.22
NDE1-209ENST00000574109 TPMTP51580 245 aa13.69□□□□□ -0.22
NDE1-209ENST00000574109 DSC2Q02487 901 aa13.69□□□□□ -0.22
NDE1-209ENST00000574109 SNX1Q13596 522 aa13.69□□□□□ -0.22
NDE1-209ENST00000574109 DHX34Q14147 1143 aaKnown RBP13.69□□□□□ -0.22
NDE1-209ENST00000574109 PARP6Q2NL67 630 aa13.69□□□□□ -0.22
NDE1-209ENST00000574109 ARMC12Q5T9G4 340 aa13.69□□□□□ -0.22
NDE1-209ENST00000574109 ERN2Q76MJ5 926 aaKnown RBP13.69□□□□□ -0.22
NDE1-209ENST00000574109 KLHDC8BQ8IXV7 354 aa13.69□□□□□ -0.22
NDE1-209ENST00000574109 MAML2Q8IZL2 1156 aaPredicted RBP13.69□□□□□ -0.22
NDE1-209ENST00000574109 ARRDC2Q8TBH0 407 aa13.69□□□□□ -0.22
NDE1-209ENST00000574109 GANCQ8TET4 914 aa13.69□□□□□ -0.22
NDE1-209ENST00000574109 TADA1Q96BN2 335 aa13.69□□□□□ -0.22
NDE1-209ENST00000574109 SRPK1Q96SB4 655 aaKnown RBP13.69□□□□□ -0.22
NDE1-209ENST00000574109 FSD1LQ9BXM9 530 aa13.69□□□□□ -0.22
NDE1-209ENST00000574109 CEP41Q9BYV8 373 aa13.69□□□□□ -0.22
NDE1-209ENST00000574109 PREBQ9HCU5 417 aa13.69□□□□□ -0.22
NDE1-209ENST00000574109 ITM2CQ9NQX7 267 aa13.69□□□□□ -0.22
NDE1-209ENST00000574109 FBXL12Q9NXK8 326 aa13.69□□□□□ -0.22
NDE1-209ENST00000574109 MRFAP1Q9Y605 127 aa13.69□□□□□ -0.22
NDE1-209ENST00000574109 ZNF106Q9H2Y7 1883 aaKnown RBP13.69□□□□□ -0.22
NDE1-209ENST00000574109 A0A1W2PP55 124 aa13.68□□□□□ -0.22
NDE1-209ENST00000574109 LRRC72A6NJI9 287 aa13.68□□□□□ -0.22
NDE1-209ENST00000574109 UPK3BL1B0FP48 263 aa13.68□□□□□ -0.22
NDE1-209ENST00000574109 UPK3BL2E5RIL1 263 aa13.68□□□□□ -0.22
NDE1-209ENST00000574109 TRAFD1O14545 582 aaPredicted RBP13.68□□□□□ -0.22
NDE1-209ENST00000574109 PGLSO95336 258 aa13.68□□□□□ -0.22
NDE1-209ENST00000574109 PIGNO95427 931 aa13.68□□□□□ -0.22
NDE1-209ENST00000574109 EPOP01588 193 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms