RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 FAM174AQ8TBP5 190 aa26.36■■□□□ 1.81
NPLOC4-215ENST00000574095 HSPH1Q92598 858 aa26.36■■□□□ 1.81
NPLOC4-215ENST00000574095 LENG8Q96PV6 779 aaPredicted RBP26.36■■□□□ 1.81
NPLOC4-215ENST00000574095 ZWILCHQ9H900 591 aa26.36■■□□□ 1.81
NPLOC4-215ENST00000574095 IGF2RP11717 2491 aa26.36■■□□□ 1.81
NPLOC4-215ENST00000574095 FPGTO14772 594 aa26.35■■□□□ 1.81
NPLOC4-215ENST00000574095 HCAR3P49019 387 aa26.35■■□□□ 1.81
NPLOC4-215ENST00000574095 DPYSQ14117 519 aa26.35■■□□□ 1.81
NPLOC4-215ENST00000574095 SKOR2Q2VWA4 1001 aaPredicted RBP26.35■■□□□ 1.81
NPLOC4-215ENST00000574095 ZNF542PQ5EBM4 170 aa26.35■■□□□ 1.81
NPLOC4-215ENST00000574095 KYAT3Q6YP21 454 aaKnown RBP26.35■■□□□ 1.81
NPLOC4-215ENST00000574095 KDM7AQ6ZMT4 941 aa26.35■■□□□ 1.81
NPLOC4-215ENST00000574095 TP53INP2Q8IXH6 220 aa26.35■■□□□ 1.81
NPLOC4-215ENST00000574095 NUP85Q9BW27 656 aa26.35■■□□□ 1.81
NPLOC4-215ENST00000574095 UCKL1Q9NWZ5 548 aa26.35■■□□□ 1.81
NPLOC4-215ENST00000574095 DKK3Q9UBP4 350 aa26.35■■□□□ 1.81
NPLOC4-215ENST00000574095 FAM149AA5PLN7 773 aa26.34■■□□□ 1.81
NPLOC4-215ENST00000574095 MMP20O60882 483 aa26.34■■□□□ 1.81
NPLOC4-215ENST00000574095 PALMO75781 387 aa26.34■■□□□ 1.81
NPLOC4-215ENST00000574095 DGKAP23743 735 aa26.34■■□□□ 1.81
NPLOC4-215ENST00000574095 RGRP47804 291 aa26.34■■□□□ 1.81
NPLOC4-215ENST00000574095 ZNF135P52742 658 aaPredicted RBP26.34■■□□□ 1.81
NPLOC4-215ENST00000574095 PIGHQ14442 188 aaPredicted RBP26.34■■□□□ 1.81
NPLOC4-215ENST00000574095 BOLA3Q53S33 107 aa26.34■■□□□ 1.81
NPLOC4-215ENST00000574095 CCDC122Q5T0U0 273 aa26.34■■□□□ 1.81
NPLOC4-215ENST00000574095 TXNRD3NBQ6F5E7 133 aa26.34■■□□□ 1.81
NPLOC4-215ENST00000574095 ALKBH5Q6P6C2 394 aaKnown RBP26.34■■□□□ 1.81
NPLOC4-215ENST00000574095 DCP2Q8IU60 420 aaKnown RBP26.34■■□□□ 1.81
NPLOC4-215ENST00000574095 GALNT15Q8N3T1 639 aa26.34■■□□□ 1.81
NPLOC4-215ENST00000574095 TSEN2Q8NCE0 465 aaKnown RBP26.34■■□□□ 1.81
NPLOC4-215ENST00000574095 ASB12Q8WXK4 309 aa26.34■■□□□ 1.81
NPLOC4-215ENST00000574095 SUV39H2Q9H5I1 410 aa26.34■■□□□ 1.81
NPLOC4-215ENST00000574095 SP110Q9HB58 689 aa26.34■■□□□ 1.81
NPLOC4-215ENST00000574095 GPR27Q9NS67 375 aa26.34■■□□□ 1.81
NPLOC4-215ENST00000574095 ANAPC7Q9UJX3 599 aa26.34■■□□□ 1.81
NPLOC4-215ENST00000574095 PCDHGA1Q9Y5H4 931 aa26.34■■□□□ 1.81
NPLOC4-215ENST00000574095 H3BRJ5 948 aa26.33■■□□□ 1.81
NPLOC4-215ENST00000574095 TRIM38O00635 465 aa26.33■■□□□ 1.81
NPLOC4-215ENST00000574095 BUB1BO60566 1050 aaPredicted RBP26.33■■□□□ 1.81
NPLOC4-215ENST00000574095 CYP1A2P05177 515 aa26.33■■□□□ 1.81
NPLOC4-215ENST00000574095 RARAP10276 462 aa26.33■■□□□ 1.81
NPLOC4-215ENST00000574095 XPAP23025 273 aaPredicted RBP26.33■■□□□ 1.81
NPLOC4-215ENST00000574095 AMPD1P23109 780 aa26.33■■□□□ 1.81
NPLOC4-215ENST00000574095 ACADVLP49748 655 aa26.33■■□□□ 1.81
NPLOC4-215ENST00000574095 SMAD1Q15797 465 aaKnown RBP26.33■■□□□ 1.81
NPLOC4-215ENST00000574095 DPYSL2Q16555 572 aa26.33■■□□□ 1.81
NPLOC4-215ENST00000574095 CXorf40AQ8TE69 158 aa26.33■■□□□ 1.81
NPLOC4-215ENST00000574095 TSC1Q92574 1164 aa26.33■■□□□ 1.81
NPLOC4-215ENST00000574095 WRAP53Q9BUR4 548 aaKnown RBP26.33■■□□□ 1.81
NPLOC4-215ENST00000574095 STAU2Q9NUL3 570 aaKnown RBP eCLIP26.33■■□□□ 1.81
NPLOC4-215ENST00000574095 DNAJC28Q9NX36 388 aa26.33■■□□□ 1.81
NPLOC4-215ENST00000574095 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP26.33■■□□□ 1.81
NPLOC4-215ENST00000574095 ANKRD36A6QL64 1941 aa26.33■■□□□ 1.81
NPLOC4-215ENST00000574095 SIGLEC6O43699 453 aa26.32■■□□□ 1.8
NPLOC4-215ENST00000574095 RFPL3O75679 317 aa26.32■■□□□ 1.8
NPLOC4-215ENST00000574095 PIAS2O75928 621 aa26.32■■□□□ 1.8
NPLOC4-215ENST00000574095 TM7SF2O76062 418 aa26.32■■□□□ 1.8
NPLOC4-215ENST00000574095 CAPNS1P04632 268 aa26.32■■□□□ 1.8
NPLOC4-215ENST00000574095 ARL4AP40617 200 aa26.32■■□□□ 1.8
NPLOC4-215ENST00000574095 RABIFP47224 123 aa26.32■■□□□ 1.8
NPLOC4-215ENST00000574095 FZD2Q14332 565 aa26.32■■□□□ 1.8
NPLOC4-215ENST00000574095 TPRG1LQ5T0D9 272 aa26.32■■□□□ 1.8
NPLOC4-215ENST00000574095 POLNQ7Z5Q5 900 aa26.32■■□□□ 1.8
NPLOC4-215ENST00000574095 SRLQ86TD4 932 aa26.32■■□□□ 1.8
NPLOC4-215ENST00000574095 CAMK1DQ8IU85 385 aa26.32■■□□□ 1.8
NPLOC4-215ENST00000574095 CENPTQ96BT3 561 aa26.32■■□□□ 1.8
NPLOC4-215ENST00000574095 ETNK2Q9NVF9 386 aa26.32■■□□□ 1.8
NPLOC4-215ENST00000574095 IP6K2Q9UHH9 426 aa26.32■■□□□ 1.8
NPLOC4-215ENST00000574095 IPO11Q9UI26 975 aaKnown RBP26.32■■□□□ 1.8
NPLOC4-215ENST00000574095 GOLGA4Q13439 2230 aaKnown RBP26.31■■□□□ 1.8
NPLOC4-215ENST00000574095 LRRK1Q38SD2 2015 aa26.31■■□□□ 1.8
NPLOC4-215ENST00000574095 SPTY2D1-AS1A0A0U1RR47 76 aa26.31■■□□□ 1.8
NPLOC4-215ENST00000574095 FFAR2O15552 330 aa26.31■■□□□ 1.8
NPLOC4-215ENST00000574095 TPM3P06753 285 aa26.31■■□□□ 1.8
NPLOC4-215ENST00000574095 CKMT2P17540 419 aa26.31■■□□□ 1.8
NPLOC4-215ENST00000574095 CLDN6P56747 220 aa26.31■■□□□ 1.8
NPLOC4-215ENST00000574095 IL10RBQ08334 325 aa26.31■■□□□ 1.8
NPLOC4-215ENST00000574095 PDE1CQ14123 709 aaPredicted RBP26.31■■□□□ 1.8
NPLOC4-215ENST00000574095 GRM3Q14832 879 aa26.31■■□□□ 1.8
NPLOC4-215ENST00000574095 LZTR1Q8N653 840 aa26.31■■□□□ 1.8
NPLOC4-215ENST00000574095 DENND6BQ8NEG7 585 aa26.31■■□□□ 1.8
NPLOC4-215ENST00000574095 HCAR2Q8TDS4 363 aa26.31■■□□□ 1.8
NPLOC4-215ENST00000574095 IFT43Q96FT9 208 aa26.31■■□□□ 1.8
NPLOC4-215ENST00000574095 CINPQ9BW66 212 aaPredicted RBP26.31■■□□□ 1.8
NPLOC4-215ENST00000574095 C1SP09871 688 aa26.3■■□□□ 1.8
NPLOC4-215ENST00000574095 EIF4A3P38919 411 aaKnown RBP26.3■■□□□ 1.8
NPLOC4-215ENST00000574095 CSNK1DP48730 415 aa26.3■■□□□ 1.8
NPLOC4-215ENST00000574095 PFN3P60673 137 aa26.3■■□□□ 1.8
NPLOC4-215ENST00000574095 ZNF211Q13398 564 aaPredicted RBP26.3■■□□□ 1.8
NPLOC4-215ENST00000574095 UGP2Q16851 508 aa26.3■■□□□ 1.8
NPLOC4-215ENST00000574095 PROX2Q3B8N5 592 aa26.3■■□□□ 1.8
NPLOC4-215ENST00000574095 TMEM52BQ4KMG9 183 aa26.3■■□□□ 1.8
NPLOC4-215ENST00000574095 CFAP58Q5T655 872 aa26.3■■□□□ 1.8
NPLOC4-215ENST00000574095 NIPA2Q8N8Q9 360 aa26.3■■□□□ 1.8
NPLOC4-215ENST00000574095 ZNF641Q96N77 438 aaPredicted RBP26.3■■□□□ 1.8
NPLOC4-215ENST00000574095 CSPG4P5Q96PW8 444 aa26.3■■□□□ 1.8
NPLOC4-215ENST00000574095 COQ6Q9Y2Z9 468 aa26.3■■□□□ 1.8
NPLOC4-215ENST00000574095 TSPAN11A1L157 253 aa26.29■■□□□ 1.8
NPLOC4-215ENST00000574095 SRRM3A6NNA2 597 aaPredicted RBP26.29■■□□□ 1.8
NPLOC4-215ENST00000574095 MYO1FO00160 1098 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms