RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 IPPQ9Y573 584 aa15.79■□□□□ 0.12
NUP88-207ENST00000573584 SCN4AP35499 1836 aa15.79■□□□□ 0.12
NUP88-207ENST00000573584 TSC2P49815 1807 aa15.79■□□□□ 0.12
NUP88-207ENST00000573584 OTOFQ9HC10 1997 aa15.79■□□□□ 0.12
NUP88-207ENST00000573584 A0A087X1B8 175 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 ARHGEF37A1IGU5 675 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 MYBPHLA2RUH7 354 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 BTBD19C9JJ37 291 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 PSMD12O00232 456 aaPredicted RBP15.78■□□□□ 0.12
NUP88-207ENST00000573584 UBDO15205 165 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 ANXA9O76027 345 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 HDCP19113 662 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 CD151P48509 253 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 KPNA2P52292 529 aaKnown RBP15.78■□□□□ 0.12
NUP88-207ENST00000573584 CSHL1Q14406 222 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 MAPRE2Q15555 327 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 DENND5AQ6IQ26 1287 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 ZNF280DQ6N043 979 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 BORAQ6PGQ7 559 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 DCLRE1AQ6PJP8 1040 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 FAM35AQ86V20 835 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 CHERPQ8IWX8 916 aaKnown RBP15.78■□□□□ 0.12
NUP88-207ENST00000573584 TSPAN14Q8NG11 270 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 HMGCLL1Q8TB92 370 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 LPGAT1Q92604 370 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 PCED1BQ96HM7 432 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 ZNF597Q96LX8 424 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 TSGA13Q96PP4 275 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 TSPAN18Q96SJ8 248 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 RRN3Q9NYV6 651 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 CACNG4Q9UBN1 327 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 RNF11Q9Y3C5 154 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 SNX13Q9Y5W8 968 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 SHROOM3Q8TF72 1996 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 HEATR9A2RTY3 570 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 FBP2O00757 339 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 SMIM10L2AP0DMW4 78 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 SMIM10L2BP0DMW5 78 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 HOXD8P13378 290 aaPredicted RBP15.78■□□□□ 0.12
NUP88-207ENST00000573584 C1QTNF8P60827 252 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 USP46P62068 366 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 IKBKEQ14164 716 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 SNX17Q15036 470 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 REP15Q6BDI9 236 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 PM20D1Q6GTS8 502 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 KDELC2Q7Z4H8 507 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 THEGQ9P2T0 379 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 TCAF1Q9Y4C2 921 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 TIMM13Q9Y5L4 95 aaPredicted RBP15.78■□□□□ 0.12
NUP88-207ENST00000573584 SMIM35A0A1B0GVV1 85 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 PRORSD1PA6NEY8 169 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 UNCXA6NJT0 531 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 H0YJX3 145 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 HNRNPRO43390 633 aaKnown RBP15.78■□□□□ 0.12
NUP88-207ENST00000573584 GPC4O75487 556 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 FGFR3P22607 806 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 PCSK6P29122 969 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 SQLEQ14534 574 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 PPP1R3AQ16821 1122 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 RAB41Q5JT25 222 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 POTEHQ6S545 545 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 CYP2R1Q6VVX0 501 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 RPS27LQ71UM5 84 aaKnown RBP15.78■□□□□ 0.12
NUP88-207ENST00000573584 SPNS2Q8IVW8 549 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 KLHDC8BQ8IXV7 354 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 TRIML2Q8N7C3 387 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 C2CD4AQ8NCU7 369 aaPredicted RBP15.78■□□□□ 0.12
NUP88-207ENST00000573584 TOP1MTQ969P6 601 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 FAR2Q96K12 515 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 ZFP42Q96MM3 310 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 FCRL5Q96RD9 977 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 CCT7Q99832 543 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 SIK2Q9H0K1 926 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 EML4Q9HC35 981 aaKnown RBP15.78■□□□□ 0.12
NUP88-207ENST00000573584 GLOD4Q9HC38 313 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 TNFRSF12AQ9NP84 129 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 SPAG4Q9NPE6 437 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 MRGBPQ9NV56 204 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 FBXO5Q9UKT4 447 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 SBF1O95248 1867 aa15.78■□□□□ 0.12
NUP88-207ENST00000573584 TRIM24O15164 1050 aa15.77■□□□□ 0.12
NUP88-207ENST00000573584 KCNA5P22460 613 aa15.77■□□□□ 0.12
NUP88-207ENST00000573584 CCNCP24863 283 aa15.77■□□□□ 0.12
NUP88-207ENST00000573584 LRPAP1P30533 357 aa15.77■□□□□ 0.12
NUP88-207ENST00000573584 SLC5A2P31639 672 aa15.77■□□□□ 0.12
NUP88-207ENST00000573584 POU4F1Q01851 419 aa15.77■□□□□ 0.12
NUP88-207ENST00000573584 FAM83EQ2M2I3 478 aa15.77■□□□□ 0.12
NUP88-207ENST00000573584 HERC6Q8IVU3 1022 aa15.77■□□□□ 0.12
NUP88-207ENST00000573584 AFAP1L2Q8N4X5 818 aa15.77■□□□□ 0.12
NUP88-207ENST00000573584 ATPAF2Q8N5M1 289 aa15.77■□□□□ 0.12
NUP88-207ENST00000573584 SMG8Q8ND04 991 aaKnown RBP15.77■□□□□ 0.12
NUP88-207ENST00000573584 ZNF419Q96HQ0 510 aaPredicted RBP15.77■□□□□ 0.12
NUP88-207ENST00000573584 SENP8Q96LD8 212 aa15.77■□□□□ 0.12
NUP88-207ENST00000573584 HAUS8Q9BT25 410 aa15.77■□□□□ 0.12
NUP88-207ENST00000573584 OSBPL11Q9BXB4 747 aa15.77■□□□□ 0.12
NUP88-207ENST00000573584 ATXN3LQ9H3M9 355 aa15.77■□□□□ 0.12
NUP88-207ENST00000573584 MEAF6Q9HAF1 191 aa15.77■□□□□ 0.12
NUP88-207ENST00000573584 IGSF5Q9NSI5 407 aa15.77■□□□□ 0.12
NUP88-207ENST00000573584 CEPT1Q9Y6K0 416 aa15.77■□□□□ 0.12
NUP88-207ENST00000573584 AURKAO14965 403 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms