RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 ANKRD6Q9Y2G4 727 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 SNX11Q9Y5W9 270 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 SLCO1B1Q9Y6L6 691 aa7.59□□□□□ -1.19
NUP88-205ENST00000572809 C1QTNF3-AMACRE9PGA6 284 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 GOLGA6L19H0YKK7 550 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 PLK4O00444 970 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 KCNK3O14649 394 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 SLC7A4O43246 635 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 CCP110O43303 1012 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 RTN2O75298 545 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 LRIG2O94898 1065 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 CER1O95813 267 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 FTLP02792 175 aaPredicted RBP7.58□□□□□ -1.2
NUP88-205ENST00000572809 GZMAP12544 262 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 SKILP12757 684 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 EDN3P14138 238 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 DESP17661 470 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 L1CAMP32004 1257 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 ETFBP38117 255 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 PRKCIP41743 596 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 RECQLP46063 649 aaPredicted RBP7.58□□□□□ -1.2
NUP88-205ENST00000572809 MAPKAPK2P49137 400 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 DNA2P51530 1060 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 METAP1P53582 386 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 ADPRHP54922 357 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 AIF1P55008 147 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 UBASH3AP57075 661 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 C21orf59P57076 290 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 SIM1P81133 766 aaPredicted RBP7.58□□□□□ -1.2
NUP88-205ENST00000572809 ARF5P84085 180 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 FANCCQ00597 558 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 KLHL30Q0D2K2 578 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 ZNF252P-AS1Q0IIN9 211 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 CNTN1Q12860 1018 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 MAMLD1Q13495 774 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 SKOR2Q2VWA4 1001 aaPredicted RBP7.58□□□□□ -1.2
NUP88-205ENST00000572809 POM121L1PQ3SYA9 428 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 CARD16Q5EG05 197 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 FIGNQ5HY92 759 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 MANEALQ5VSG8 457 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 DBX2Q6ZNG2 339 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 ZNF571Q7Z3V5 609 aaPredicted RBP7.58□□□□□ -1.2
NUP88-205ENST00000572809 ADAT2Q7Z6V5 191 aaKnown RBP7.58□□□□□ -1.2
NUP88-205ENST00000572809 PRPF39Q86UA1 669 aaKnown RBP7.58□□□□□ -1.2
NUP88-205ENST00000572809 NLRP14Q86W24 1093 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 PYROXD2Q8N2H3 581 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 ARHGEF2Q92974 986 aaKnown RBP7.58□□□□□ -1.2
NUP88-205ENST00000572809 FAM131CQ96AQ9 280 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 TBC1D31Q96DN5 1066 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 CRELD1Q96HD1 420 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 CNPY3Q9BT09 278 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 ACE2Q9BYF1 805 aaPredicted RBP7.58□□□□□ -1.2
NUP88-205ENST00000572809 CEP44Q9C0F1 390 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 TTYH3Q9C0H2 523 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 MAGEH1Q9H213 219 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 TNKS2Q9H2K2 1166 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 IL21RQ9HBE5 538 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 TPSG1Q9NRR2 321 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 TM7SF3Q9NS93 570 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 TAS2R14Q9NYV8 317 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 FAM8A1Q9UBU6 413 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 IL36AQ9UHA7 158 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 KLF15Q9UIH9 416 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 FZD10Q9ULW2 581 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 HPCAL4Q9UM19 191 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 PCDH15Q96QU1 1955 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 NUMA1Q14980 2115 aa7.58□□□□□ -1.2
NUP88-205ENST00000572809 CNOT1A5YKK6 2376 aaKnown RBP7.57□□□□□ -1.2
NUP88-205ENST00000572809 SPTBN2O15020 2390 aa7.57□□□□□ -1.2
NUP88-205ENST00000572809 CXorf51AA0A1B0GTR3 108 aa7.57□□□□□ -1.2
NUP88-205ENST00000572809 SPAARA0A1B0GVQ0 90 aa7.57□□□□□ -1.2
NUP88-205ENST00000572809 TMEM191CA6NGB0 347 aa7.57□□□□□ -1.2
NUP88-205ENST00000572809 C10orf142B7Z368 130 aa7.57□□□□□ -1.2
NUP88-205ENST00000572809 KPNA3O00505 521 aaPredicted RBP7.57□□□□□ -1.2
NUP88-205ENST00000572809 DDX3XO00571 662 aaKnown RBP eCLIP7.57□□□□□ -1.2
NUP88-205ENST00000572809 VILLO15195 856 aa7.57□□□□□ -1.2
NUP88-205ENST00000572809 PLRG1O43660 514 aaKnown RBP7.57□□□□□ -1.2
NUP88-205ENST00000572809 KDELR3O43731 214 aa7.57□□□□□ -1.2
NUP88-205ENST00000572809 CREB3O43889 395 aa7.57□□□□□ -1.2
NUP88-205ENST00000572809 DFNA5O60443 496 aa7.57□□□□□ -1.2
NUP88-205ENST00000572809 RAMP2O60895 175 aa7.57□□□□□ -1.2
NUP88-205ENST00000572809 ZNF821O75541 412 aaPredicted RBP7.57□□□□□ -1.2
NUP88-205ENST00000572809 CD160O95971 181 aa7.57□□□□□ -1.2
NUP88-205ENST00000572809 PRNPP04156 253 aa7.57□□□□□ -1.2
NUP88-205ENST00000572809 CTSLP07711 333 aa7.57□□□□□ -1.2
NUP88-205ENST00000572809 ZNF883P0CG24 379 aa7.57□□□□□ -1.2
NUP88-205ENST00000572809 RARAP10276 462 aa7.57□□□□□ -1.2
NUP88-205ENST00000572809 PSMA2P25787 234 aa7.57□□□□□ -1.2
NUP88-205ENST00000572809 ADH6P28332 368 aa7.57□□□□□ -1.2
NUP88-205ENST00000572809 CD38P28907 300 aa7.57□□□□□ -1.2
NUP88-205ENST00000572809 EPHB2P29323 1055 aa7.57□□□□□ -1.2
NUP88-205ENST00000572809 ACVRL1P37023 503 aa7.57□□□□□ -1.2
NUP88-205ENST00000572809 CTSKP43235 329 aa7.57□□□□□ -1.2
NUP88-205ENST00000572809 SERPINH1P50454 418 aaKnown RBP7.57□□□□□ -1.2
NUP88-205ENST00000572809 GEMIN4P57678 1058 aaKnown RBP7.57□□□□□ -1.2
NUP88-205ENST00000572809 FAM193AP78312 1265 aa7.57□□□□□ -1.2
NUP88-205ENST00000572809 SHC2P98077 582 aa7.57□□□□□ -1.2
NUP88-205ENST00000572809 OGDHQ02218 1023 aa7.57□□□□□ -1.2
NUP88-205ENST00000572809 SCAPQ12770 1279 aa7.57□□□□□ -1.2
NUP88-205ENST00000572809 POLD3Q15054 466 aaPredicted RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms