RNA–Protein interactions for RNA: ENST00000571976.1

LITAF-210, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-210ENST00000571976 PRPF39Q86UA1 669 aaKnown RBP16.36■□□□□ 0.21
LITAF-210ENST00000571976 TRIM69Q86WT6 500 aa16.36■□□□□ 0.21
LITAF-210ENST00000571976 CCDC13Q8IYE1 715 aa16.36■□□□□ 0.21
LITAF-210ENST00000571976 PGBD5Q8N414 524 aa16.36■□□□□ 0.21
LITAF-210ENST00000571976 UBL4BQ8N7F7 174 aa16.36■□□□□ 0.21
LITAF-210ENST00000571976 OLFM3Q96PB7 478 aa16.36■□□□□ 0.21
LITAF-210ENST00000571976 NUDCD1Q96RS6 583 aa16.36■□□□□ 0.21
LITAF-210ENST00000571976 LGMNQ99538 433 aa16.36■□□□□ 0.21
LITAF-210ENST00000571976 MGME1Q9BQP7 344 aa16.36■□□□□ 0.21
LITAF-210ENST00000571976 AMACRQ9UHK6 382 aa16.36■□□□□ 0.21
LITAF-210ENST00000571976 SLC6A14Q9UN76 642 aa16.36■□□□□ 0.21
LITAF-210ENST00000571976 FADS3Q9Y5Q0 445 aa16.36■□□□□ 0.21
LITAF-210ENST00000571976 CAPN6Q9Y6Q1 641 aa16.36■□□□□ 0.21
LITAF-210ENST00000571976 GON4LQ3T8J9 2241 aa16.35■□□□□ 0.21
LITAF-210ENST00000571976 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.35■□□□□ 0.21
LITAF-210ENST00000571976 A0A1W2PPC4 97 aa16.35■□□□□ 0.21
LITAF-210ENST00000571976 PATE3B3GLJ2 98 aa16.35■□□□□ 0.21
LITAF-210ENST00000571976 BCAT2O15382 392 aaPredicted RBP16.35■□□□□ 0.21
LITAF-210ENST00000571976 RNGTTO60942 597 aaKnown RBP16.35■□□□□ 0.21
LITAF-210ENST00000571976 PIGNO95427 931 aa16.35■□□□□ 0.21
LITAF-210ENST00000571976 FTCDO95954 541 aa16.35■□□□□ 0.21
LITAF-210ENST00000571976 CFIP05156 583 aa16.35■□□□□ 0.21
LITAF-210ENST00000571976 PTMAP06454 111 aaKnown RBP16.35■□□□□ 0.21
LITAF-210ENST00000571976 CR2P20023 1033 aa16.35■□□□□ 0.21
LITAF-210ENST00000571976 NUDT1P36639 197 aa16.35■□□□□ 0.21
LITAF-210ENST00000571976 SUOXP51687 545 aa16.35■□□□□ 0.21
LITAF-210ENST00000571976 IRX4P78413 519 aa16.35■□□□□ 0.21
LITAF-210ENST00000571976 LLGL1Q15334 1064 aa16.35■□□□□ 0.21
LITAF-210ENST00000571976 TCEAL6Q6IPX3 200 aa16.35■□□□□ 0.21
LITAF-210ENST00000571976 BRAT1Q6PJG6 821 aa16.35■□□□□ 0.21
LITAF-210ENST00000571976 TTC7BQ86TV6 843 aa16.35■□□□□ 0.21
LITAF-210ENST00000571976 CAMK1DQ8IU85 385 aa16.35■□□□□ 0.21
LITAF-210ENST00000571976 ZCCHC9Q8N567 271 aaKnown RBP16.35■□□□□ 0.21
LITAF-210ENST00000571976 C1orf216Q8TAB5 229 aa16.35■□□□□ 0.21
LITAF-210ENST00000571976 ALG3Q92685 438 aa16.35■□□□□ 0.21
LITAF-210ENST00000571976 P3H4Q92791 437 aa16.35■□□□□ 0.21
LITAF-210ENST00000571976 TCEAL3Q969E4 200 aa16.35■□□□□ 0.21
LITAF-210ENST00000571976 PDLIM2Q96JY6 352 aa16.35■□□□□ 0.21
LITAF-210ENST00000571976 ORAI3Q9BRQ5 295 aa16.35■□□□□ 0.21
LITAF-210ENST00000571976 NT5MQ9NPB1 228 aa16.35■□□□□ 0.21
LITAF-210ENST00000571976 SCUBE2Q9NQ36 999 aa16.35■□□□□ 0.21
LITAF-210ENST00000571976 LZTFL1Q9NQ48 299 aa16.35■□□□□ 0.21
LITAF-210ENST00000571976 RBM22Q9NW64 420 aaKnown RBP eCLIP16.35■□□□□ 0.21
LITAF-210ENST00000571976 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.35■□□□□ 0.21
LITAF-210ENST00000571976 TSPAN11A1L157 253 aa16.34■□□□□ 0.21
LITAF-210ENST00000571976 TSPAN6O43657 245 aa16.34■□□□□ 0.21
LITAF-210ENST00000571976 NEBLO76041 1014 aa16.34■□□□□ 0.21
LITAF-210ENST00000571976 PCDH8O95206 1070 aa16.34■□□□□ 0.21
LITAF-210ENST00000571976 PYGMP11217 842 aa16.34■□□□□ 0.21
LITAF-210ENST00000571976 TIMP2P16035 220 aa16.34■□□□□ 0.21
LITAF-210ENST00000571976 XPAP23025 273 aaPredicted RBP16.34■□□□□ 0.21
LITAF-210ENST00000571976 CES1P23141 567 aa16.34■□□□□ 0.21
LITAF-210ENST00000571976 PTPN7P35236 360 aa16.34■□□□□ 0.21
LITAF-210ENST00000571976 ABL2P42684 1182 aa16.34■□□□□ 0.21
LITAF-210ENST00000571976 MAXP61244 160 aa16.34■□□□□ 0.21
LITAF-210ENST00000571976 PPP2CBP62714 309 aa16.34■□□□□ 0.21
LITAF-210ENST00000571976 PPP2CAP67775 309 aa16.34■□□□□ 0.21
LITAF-210ENST00000571976 ARHGAP8P85298 464 aa16.34■□□□□ 0.21
LITAF-210ENST00000571976 ADCY2Q08462 1091 aa16.34■□□□□ 0.21
LITAF-210ENST00000571976 AP1B1Q10567 949 aa16.34■□□□□ 0.21
LITAF-210ENST00000571976 AASDHQ4L235 1098 aaPredicted RBP16.34■□□□□ 0.21
LITAF-210ENST00000571976 BBS12Q6ZW61 710 aa16.34■□□□□ 0.21
LITAF-210ENST00000571976 ZSCAN30Q86W11 494 aa16.34■□□□□ 0.21
LITAF-210ENST00000571976 HORMAD1Q86X24 394 aa16.34■□□□□ 0.21
LITAF-210ENST00000571976 HES6Q96HZ4 224 aa16.34■□□□□ 0.21
LITAF-210ENST00000571976 FEM1CQ96JP0 617 aa16.34■□□□□ 0.21
LITAF-210ENST00000571976 HEMGNQ9BXL5 484 aa16.34■□□□□ 0.21
LITAF-210ENST00000571976 OSBPL8Q9BZF1 889 aa16.34■□□□□ 0.21
LITAF-210ENST00000571976 POLR1EQ9GZS1 481 aaKnown RBP16.34■□□□□ 0.21
LITAF-210ENST00000571976 EBF2Q9HAK2 575 aa16.34■□□□□ 0.21
LITAF-210ENST00000571976 CAPN10Q9HC96 672 aa16.34■□□□□ 0.21
LITAF-210ENST00000571976 TM9SF3Q9HD45 589 aa16.34■□□□□ 0.21
LITAF-210ENST00000571976 SAE1Q9UBE0 346 aaPredicted RBP16.34■□□□□ 0.21
LITAF-210ENST00000571976 PACSIN2Q9UNF0 486 aaPredicted RBP16.34■□□□□ 0.21
LITAF-210ENST00000571976 DMTF1Q9Y222 760 aa16.34■□□□□ 0.21
LITAF-210ENST00000571976 PPP2R2CQ9Y2T4 447 aa16.34■□□□□ 0.21
LITAF-210ENST00000571976 SHROOM3Q8TF72 1996 aa16.33■□□□□ 0.21
LITAF-210ENST00000571976 A0A1W2PQ67 120 aa16.33■□□□□ 0.2
LITAF-210ENST00000571976 A0A1W2PQU0 124 aa16.33■□□□□ 0.2
LITAF-210ENST00000571976 KCNK1O00180 336 aa16.33■□□□□ 0.2
LITAF-210ENST00000571976 NEMP1O14524 444 aa16.33■□□□□ 0.2
LITAF-210ENST00000571976 TRAFD1O14545 582 aaPredicted RBP16.33■□□□□ 0.2
LITAF-210ENST00000571976 AREL1O15033 823 aa16.33■□□□□ 0.2
LITAF-210ENST00000571976 DDX3YO15523 660 aaKnown RBP16.33■□□□□ 0.2
LITAF-210ENST00000571976 SOCS5O75159 536 aa16.33■□□□□ 0.2
LITAF-210ENST00000571976 GJB3O75712 270 aa16.33■□□□□ 0.2
LITAF-210ENST00000571976 JCHAINP01591 159 aa16.33■□□□□ 0.2
LITAF-210ENST00000571976 MAT2AP31153 395 aaKnown RBP16.33■□□□□ 0.2
LITAF-210ENST00000571976 AFF3P51826 1226 aaKnown RBP16.33■□□□□ 0.2
LITAF-210ENST00000571976 POLR2LP62875 67 aaKnown RBP16.33■□□□□ 0.2
LITAF-210ENST00000571976 RPS21P63220 83 aaKnown RBP16.33■□□□□ 0.2
LITAF-210ENST00000571976 RACK1P63244 317 aaKnown RBP16.33■□□□□ 0.2
LITAF-210ENST00000571976 IFI35P80217 286 aaPredicted RBP16.33■□□□□ 0.2
LITAF-210ENST00000571976 ITKQ08881 620 aa16.33■□□□□ 0.2
LITAF-210ENST00000571976 UGP2Q16851 508 aa16.33■□□□□ 0.2
LITAF-210ENST00000571976 SETMARQ53H47 684 aaPredicted RBP16.33■□□□□ 0.2
LITAF-210ENST00000571976 KIAA1161Q6NSJ0 714 aa16.33■□□□□ 0.2
LITAF-210ENST00000571976 LRRN4Q8WUT4 740 aa16.33■□□□□ 0.2
LITAF-210ENST00000571976 ECHDC3Q96DC8 303 aa16.33■□□□□ 0.2
LITAF-210ENST00000571976 ALS2CR12Q96Q35 445 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms