RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 ASLP04424 464 aa13.54□□□□□ -0.24
CCDC40-205ENST00000571028 NNMTP40261 264 aa13.54□□□□□ -0.24
CCDC40-205ENST00000571028 ZNF135P52742 658 aaPredicted RBP13.54□□□□□ -0.24
CCDC40-205ENST00000571028 PLK1P53350 603 aa13.54□□□□□ -0.24
CCDC40-205ENST00000571028 TMPRSS3P57727 454 aa13.54□□□□□ -0.24
CCDC40-205ENST00000571028 DYNLT1P63172 113 aa13.54□□□□□ -0.24
CCDC40-205ENST00000571028 ANKRD20A8PQ5CZ79 823 aa13.54□□□□□ -0.24
CCDC40-205ENST00000571028 LRRC38Q5VT99 294 aa13.54□□□□□ -0.24
CCDC40-205ENST00000571028 NT5DC3Q86UY8 548 aa13.54□□□□□ -0.24
CCDC40-205ENST00000571028 SPACA3Q8IXA5 215 aa13.54□□□□□ -0.24
CCDC40-205ENST00000571028 TP53INP2Q8IXH6 220 aa13.54□□□□□ -0.24
CCDC40-205ENST00000571028 NPWQ8N729 165 aa13.54□□□□□ -0.24
CCDC40-205ENST00000571028 LRRC57Q8N9N7 239 aa13.54□□□□□ -0.24
CCDC40-205ENST00000571028 FAM181AQ8N9Y4 354 aa13.54□□□□□ -0.24
CCDC40-205ENST00000571028 PCDH19Q8TAB3 1148 aa13.54□□□□□ -0.24
CCDC40-205ENST00000571028 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.54□□□□□ -0.24
CCDC40-205ENST00000571028 GANCQ8TET4 914 aa13.54□□□□□ -0.24
CCDC40-205ENST00000571028 TSC1Q92574 1164 aa13.54□□□□□ -0.24
CCDC40-205ENST00000571028 ALG14Q96F25 216 aa13.54□□□□□ -0.24
CCDC40-205ENST00000571028 HMCESQ96FZ2 354 aa13.54□□□□□ -0.24
CCDC40-205ENST00000571028 ELF4Q99607 663 aaPredicted RBP13.54□□□□□ -0.24
CCDC40-205ENST00000571028 C2orf49Q9BVC5 232 aaPredicted RBP13.54□□□□□ -0.24
CCDC40-205ENST00000571028 SLC39A8Q9C0K1 460 aa13.54□□□□□ -0.24
CCDC40-205ENST00000571028 KLC2Q9H0B6 622 aa13.54□□□□□ -0.24
CCDC40-205ENST00000571028 MAGEH1Q9H213 219 aa13.54□□□□□ -0.24
CCDC40-205ENST00000571028 VPS51Q9UID3 782 aa13.54□□□□□ -0.24
CCDC40-205ENST00000571028 HPCAL4Q9UM19 191 aa13.54□□□□□ -0.24
CCDC40-205ENST00000571028 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.54□□□□□ -0.24
CCDC40-205ENST00000571028 SHROOM3Q8TF72 1996 aa13.54□□□□□ -0.24
CCDC40-205ENST00000571028 GOLGA4Q13439 2230 aaKnown RBP13.54□□□□□ -0.24
CCDC40-205ENST00000571028 FAM47DPA6NHR8 397 aa13.53□□□□□ -0.24
CCDC40-205ENST00000571028 K7ERQ8 282 aa13.53□□□□□ -0.24
CCDC40-205ENST00000571028 YKT6O15498 198 aa13.53□□□□□ -0.24
CCDC40-205ENST00000571028 ZRANB2O95218 330 aaKnown RBP eCLIP13.53□□□□□ -0.24
CCDC40-205ENST00000571028 MT-CO1P00395 513 aa13.53□□□□□ -0.24
CCDC40-205ENST00000571028 KRT10P13645 584 aa13.53□□□□□ -0.24
CCDC40-205ENST00000571028 IL4RP24394 825 aa13.53□□□□□ -0.24
CCDC40-205ENST00000571028 ETFBP38117 255 aa13.53□□□□□ -0.24
CCDC40-205ENST00000571028 ACADVLP49748 655 aa13.53□□□□□ -0.24
CCDC40-205ENST00000571028 PAPOLAP51003 745 aaKnown RBP13.53□□□□□ -0.24
CCDC40-205ENST00000571028 UCNP55089 124 aa13.53□□□□□ -0.24
CCDC40-205ENST00000571028 RACK1P63244 317 aaKnown RBP13.53□□□□□ -0.24
CCDC40-205ENST00000571028 ZBTB16Q05516 673 aa13.53□□□□□ -0.24
CCDC40-205ENST00000571028 SULT2A1Q06520 285 aa13.53□□□□□ -0.24
CCDC40-205ENST00000571028 ZNF211Q13398 564 aaPredicted RBP13.53□□□□□ -0.24
CCDC40-205ENST00000571028 TBC1D25Q3MII6 688 aa13.53□□□□□ -0.24
CCDC40-205ENST00000571028 MFSD7Q6UXD7 560 aa13.53□□□□□ -0.24
CCDC40-205ENST00000571028 ZNF783Q6ZMS7 281 aa13.53□□□□□ -0.24
CCDC40-205ENST00000571028 REXO1L1PQ8IX06 675 aa13.53□□□□□ -0.24
CCDC40-205ENST00000571028 EID2Q8N6I1 236 aa13.53□□□□□ -0.24
CCDC40-205ENST00000571028 DCAF4L2Q8NA75 395 aa13.53□□□□□ -0.24
CCDC40-205ENST00000571028 ATP11CQ8NB49 1132 aa13.53□□□□□ -0.24
CCDC40-205ENST00000571028 ZNF248Q8NDW4 579 aa13.53□□□□□ -0.24
CCDC40-205ENST00000571028 MRGPRX3Q96LB0 322 aa13.53□□□□□ -0.24
CCDC40-205ENST00000571028 ALS2CR12Q96Q35 445 aa13.53□□□□□ -0.24
CCDC40-205ENST00000571028 ZNF670Q9BS34 389 aa13.53□□□□□ -0.24
CCDC40-205ENST00000571028 NOL6Q9H6R4 1146 aaKnown RBP13.53□□□□□ -0.24
CCDC40-205ENST00000571028 FBRSQ9HAH7 460 aa13.53□□□□□ -0.24
CCDC40-205ENST00000571028 SGK2Q9HBY8 427 aa13.53□□□□□ -0.24
CCDC40-205ENST00000571028 NCKAP1Q9Y2A7 1128 aa13.53□□□□□ -0.24
CCDC40-205ENST00000571028 PCDHA3Q9Y5H8 950 aa13.53□□□□□ -0.24
CCDC40-205ENST00000571028 CCDC66A2RUB6 948 aa13.52□□□□□ -0.25
CCDC40-205ENST00000571028 ARHGAP42A6NI28 874 aa13.52□□□□□ -0.25
CCDC40-205ENST00000571028 C3orf70A6NLC5 250 aaPredicted RBP13.52□□□□□ -0.25
CCDC40-205ENST00000571028 USP27XA6NNY8 438 aa13.52□□□□□ -0.25
CCDC40-205ENST00000571028 VILLO15195 856 aa13.52□□□□□ -0.25
CCDC40-205ENST00000571028 VAV1P15498 845 aa13.52□□□□□ -0.25
CCDC40-205ENST00000571028 CTNNA2P26232 953 aa13.52□□□□□ -0.25
CCDC40-205ENST00000571028 CTNNA1P35221 906 aaKnown RBP13.52□□□□□ -0.25
CCDC40-205ENST00000571028 ARRB1P49407 418 aaPredicted RBP13.52□□□□□ -0.25
CCDC40-205ENST00000571028 RWDD2BP57060 319 aa13.52□□□□□ -0.25
CCDC40-205ENST00000571028 PCBP4P57723 403 aaKnown RBP13.52□□□□□ -0.25
CCDC40-205ENST00000571028 YBEYP58557 167 aaPredicted RBP13.52□□□□□ -0.25
CCDC40-205ENST00000571028 CAMK2GQ13555 558 aaPredicted RBP13.52□□□□□ -0.25
CCDC40-205ENST00000571028 PRAMEF14Q5SWL7 426 aa13.52□□□□□ -0.25
CCDC40-205ENST00000571028 NCBP2-AS2Q69YL0 99 aa13.52□□□□□ -0.25
CCDC40-205ENST00000571028 RETSATQ6NUM9 610 aa13.52□□□□□ -0.25
CCDC40-205ENST00000571028 AADACL2Q6P093 401 aa13.52□□□□□ -0.25
CCDC40-205ENST00000571028 FBXL19Q6PCT2 694 aa13.52□□□□□ -0.25
CCDC40-205ENST00000571028 PCSK4Q6UW60 755 aa13.52□□□□□ -0.25
CCDC40-205ENST00000571028 SPOCD1Q6ZMY3 1216 aa13.52□□□□□ -0.25
CCDC40-205ENST00000571028 ARHGAP36Q6ZRI8 547 aa13.52□□□□□ -0.25
CCDC40-205ENST00000571028 KATNAL2Q8IYT4 538 aa13.52□□□□□ -0.25
CCDC40-205ENST00000571028 RCOR2Q8IZ40 523 aa13.52□□□□□ -0.25
CCDC40-205ENST00000571028 UMODL1-AS1Q8N2C9 162 aa13.52□□□□□ -0.25
CCDC40-205ENST00000571028 UBL4BQ8N7F7 174 aa13.52□□□□□ -0.25
CCDC40-205ENST00000571028 LRRN4Q8WUT4 740 aa13.52□□□□□ -0.25
CCDC40-205ENST00000571028 WBP1Q96G27 269 aa13.52□□□□□ -0.25
CCDC40-205ENST00000571028 NAF1Q96HR8 494 aaKnown RBP13.52□□□□□ -0.25
CCDC40-205ENST00000571028 RBM41Q96IZ5 413 aaKnown RBP13.52□□□□□ -0.25
CCDC40-205ENST00000571028 RNF157Q96PX1 679 aa13.52□□□□□ -0.25
CCDC40-205ENST00000571028 HEMGNQ9BXL5 484 aa13.52□□□□□ -0.25
CCDC40-205ENST00000571028 RETREG1Q9H6L5 497 aa13.52□□□□□ -0.25
CCDC40-205ENST00000571028 GDF3Q9NR23 364 aa13.52□□□□□ -0.25
CCDC40-205ENST00000571028 AASDHPPTQ9NRN7 309 aa13.52□□□□□ -0.25
CCDC40-205ENST00000571028 DONSONQ9NYP3 566 aa13.52□□□□□ -0.25
CCDC40-205ENST00000571028 RCOR3Q9P2K3 495 aaPredicted RBP13.52□□□□□ -0.25
CCDC40-205ENST00000571028 CLCA2Q9UQC9 943 aa13.52□□□□□ -0.25
CCDC40-205ENST00000571028 FCF1Q9Y324 198 aaKnown RBP13.52□□□□□ -0.25
CCDC40-205ENST00000571028 NAV2Q8IVL1 2488 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms