RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 H0Y8X5 98 aa13.56□□□□□ -0.24
RPAIN-207ENST00000570883 SLC31A1O15431 190 aa13.56□□□□□ -0.24
RPAIN-207ENST00000570883 MAP3K6O95382 1288 aa13.56□□□□□ -0.24
RPAIN-207ENST00000570883 CER1O95813 267 aa13.56□□□□□ -0.24
RPAIN-207ENST00000570883 ZNF883P0CG24 379 aa13.56□□□□□ -0.24
RPAIN-207ENST00000570883 TIMP2P16035 220 aa13.56□□□□□ -0.24
RPAIN-207ENST00000570883 CSRP1P21291 193 aaKnown RBP13.56□□□□□ -0.24
RPAIN-207ENST00000570883 COMTP21964 271 aa13.56□□□□□ -0.24
RPAIN-207ENST00000570883 KCNA4P22459 653 aa13.56□□□□□ -0.24
RPAIN-207ENST00000570883 CSNK1DP48730 415 aa13.56□□□□□ -0.24
RPAIN-207ENST00000570883 NOVA1P51513 510 aaKnown RBP13.56□□□□□ -0.24
RPAIN-207ENST00000570883 GBE1Q04446 702 aa13.56□□□□□ -0.24
RPAIN-207ENST00000570883 RAD51Q06609 339 aa13.56□□□□□ -0.24
RPAIN-207ENST00000570883 LBRQ14739 615 aaKnown RBP13.56□□□□□ -0.24
RPAIN-207ENST00000570883 ZNF423Q2M1K9 1284 aa13.56□□□□□ -0.24
RPAIN-207ENST00000570883 LRRC38Q5VT99 294 aa13.56□□□□□ -0.24
RPAIN-207ENST00000570883 KIAA1161Q6NSJ0 714 aa13.56□□□□□ -0.24
RPAIN-207ENST00000570883 PSAPL1Q6NUJ1 521 aa13.56□□□□□ -0.24
RPAIN-207ENST00000570883 SRLQ86TD4 932 aa13.56□□□□□ -0.24
RPAIN-207ENST00000570883 CAMK1DQ8IU85 385 aa13.56□□□□□ -0.24
RPAIN-207ENST00000570883 RAB7BQ96AH8 199 aa13.56□□□□□ -0.24
RPAIN-207ENST00000570883 MYOCQ99972 504 aa13.56□□□□□ -0.24
RPAIN-207ENST00000570883 SUV39H2Q9H5I1 410 aa13.56□□□□□ -0.24
RPAIN-207ENST00000570883 SEPT3Q9UH03 358 aa13.56□□□□□ -0.24
RPAIN-207ENST00000570883 EPN1Q9Y6I3 576 aaPredicted RBP13.56□□□□□ -0.24
RPAIN-207ENST00000570883 FRYQ5TBA9 3013 aa13.56□□□□□ -0.24
RPAIN-207ENST00000570883 AKAP13Q12802 2813 aa13.55□□□□□ -0.24
RPAIN-207ENST00000570883 A0A0A6YYK5 440 aaPredicted RBP13.55□□□□□ -0.24
RPAIN-207ENST00000570883 PRAMEF26H0Y7S4 382 aa13.55□□□□□ -0.24
RPAIN-207ENST00000570883 RAD51BO15315 384 aa13.55□□□□□ -0.24
RPAIN-207ENST00000570883 KRT1P04264 644 aa13.55□□□□□ -0.24
RPAIN-207ENST00000570883 CR2P20023 1033 aa13.55□□□□□ -0.24
RPAIN-207ENST00000570883 GARSP41250 739 aaKnown RBP13.55□□□□□ -0.24
RPAIN-207ENST00000570883 SLC1A1P43005 524 aa13.55□□□□□ -0.24
RPAIN-207ENST00000570883 C21orf59P57076 290 aa13.55□□□□□ -0.24
RPAIN-207ENST00000570883 NXPH1P58417 271 aa13.55□□□□□ -0.24
RPAIN-207ENST00000570883 RPS21P63220 83 aaKnown RBP13.55□□□□□ -0.24
RPAIN-207ENST00000570883 SLC10A2Q12908 348 aaPredicted RBP13.55□□□□□ -0.24
RPAIN-207ENST00000570883 SLC14A1Q13336 389 aa13.55□□□□□ -0.24
RPAIN-207ENST00000570883 ZNF235Q14590 738 aa13.55□□□□□ -0.24
RPAIN-207ENST00000570883 SHBQ15464 509 aa13.55□□□□□ -0.24
RPAIN-207ENST00000570883 SPA17Q15506 151 aa13.55□□□□□ -0.24
RPAIN-207ENST00000570883 PRAMEF14Q5SWL7 426 aa13.55□□□□□ -0.24
RPAIN-207ENST00000570883 ZFYVE27Q5T4F4 411 aa13.55□□□□□ -0.24
RPAIN-207ENST00000570883 GCNT7Q6ZNI0 430 aa13.55□□□□□ -0.24
RPAIN-207ENST00000570883 SPATS2Q86XZ4 545 aaKnown RBP13.55□□□□□ -0.24
RPAIN-207ENST00000570883 MAP7D3Q8IWC1 876 aa13.55□□□□□ -0.24
RPAIN-207ENST00000570883 PLD5Q8N7P1 536 aa13.55□□□□□ -0.24
RPAIN-207ENST00000570883 MFSD2AQ8NA29 543 aa13.55□□□□□ -0.24
RPAIN-207ENST00000570883 SPC24Q8NBT2 197 aa13.55□□□□□ -0.24
RPAIN-207ENST00000570883 ACRBPQ8NEB7 543 aa13.55□□□□□ -0.24
RPAIN-207ENST00000570883 LRRN4Q8WUT4 740 aa13.55□□□□□ -0.24
RPAIN-207ENST00000570883 ECHDC3Q96DC8 303 aa13.55□□□□□ -0.24
RPAIN-207ENST00000570883 CAMK1GQ96NX5 476 aa13.55□□□□□ -0.24
RPAIN-207ENST00000570883 RNF157Q96PX1 679 aa13.55□□□□□ -0.24
RPAIN-207ENST00000570883 TUBGCP5Q96RT8 1024 aa13.55□□□□□ -0.24
RPAIN-207ENST00000570883 MGME1Q9BQP7 344 aa13.55□□□□□ -0.24
RPAIN-207ENST00000570883 TM7SF3Q9NS93 570 aa13.55□□□□□ -0.24
RPAIN-207ENST00000570883 TPRP12270 2363 aaKnown RBP13.55□□□□□ -0.24
RPAIN-207ENST00000570883 COL5A1P20908 1838 aaPredicted RBP13.55□□□□□ -0.24
RPAIN-207ENST00000570883 PTPRBP23467 1997 aa13.54□□□□□ -0.24
RPAIN-207ENST00000570883 IGLON5A6NGN9 336 aa13.54□□□□□ -0.24
RPAIN-207ENST00000570883 ZNF487B1APH4 448 aa13.54□□□□□ -0.24
RPAIN-207ENST00000570883 TLR4O00206 839 aa13.54□□□□□ -0.24
RPAIN-207ENST00000570883 TRAFD1O14545 582 aaPredicted RBP13.54□□□□□ -0.24
RPAIN-207ENST00000570883 TSPAN6O43657 245 aa13.54□□□□□ -0.24
RPAIN-207ENST00000570883 SPOPO43791 374 aa13.54□□□□□ -0.24
RPAIN-207ENST00000570883 SH3BP5O60239 455 aa13.54□□□□□ -0.24
RPAIN-207ENST00000570883 TNNT1P13805 278 aa13.54□□□□□ -0.24
RPAIN-207ENST00000570883 HNRNPA2B1P22626 353 aaKnown RBP13.54□□□□□ -0.24
RPAIN-207ENST00000570883 MMP13P45452 471 aa13.54□□□□□ -0.24
RPAIN-207ENST00000570883 NOP2P46087 812 aaKnown RBP13.54□□□□□ -0.24
RPAIN-207ENST00000570883 MARCKSL1P49006 195 aa13.54□□□□□ -0.24
RPAIN-207ENST00000570883 SCNN1BP51168 640 aa13.54□□□□□ -0.24
RPAIN-207ENST00000570883 CLDN2P57739 230 aa13.54□□□□□ -0.24
RPAIN-207ENST00000570883 AP1S1P61966 158 aa13.54□□□□□ -0.24
RPAIN-207ENST00000570883 FAM193AP78312 1265 aa13.54□□□□□ -0.24
RPAIN-207ENST00000570883 IL9RQ01113 521 aa13.54□□□□□ -0.24
RPAIN-207ENST00000570883 NSUN2Q08J23 767 aaKnown RBP eCLIP13.54□□□□□ -0.24
RPAIN-207ENST00000570883 GRM3Q14832 879 aa13.54□□□□□ -0.24
RPAIN-207ENST00000570883 SLC9A4Q6AI14 798 aa13.54□□□□□ -0.24
RPAIN-207ENST00000570883 C11orf63Q6NUN7 778 aa13.54□□□□□ -0.24
RPAIN-207ENST00000570883 TTC7BQ86TV6 843 aa13.54□□□□□ -0.24
RPAIN-207ENST00000570883 IQCHQ86VS3 1027 aa13.54□□□□□ -0.24
RPAIN-207ENST00000570883 VSIG1Q86XK7 387 aa13.54□□□□□ -0.24
RPAIN-207ENST00000570883 RHOT1Q8IXI2 618 aa13.54□□□□□ -0.24
RPAIN-207ENST00000570883 TEX26Q8N6G2 289 aa13.54□□□□□ -0.24
RPAIN-207ENST00000570883 FEM1CQ96JP0 617 aa13.54□□□□□ -0.24
RPAIN-207ENST00000570883 ZNF641Q96N77 438 aaPredicted RBP13.54□□□□□ -0.24
RPAIN-207ENST00000570883 KLF6Q99612 283 aaPredicted RBP13.54□□□□□ -0.24
RPAIN-207ENST00000570883 BAG1Q99933 345 aaPredicted RBP13.54□□□□□ -0.24
RPAIN-207ENST00000570883 C1QTNF2Q9BXJ5 285 aa13.54□□□□□ -0.24
RPAIN-207ENST00000570883 SLC17A9Q9BYT1 436 aa13.54□□□□□ -0.24
RPAIN-207ENST00000570883 LACRTQ9GZZ8 138 aa13.54□□□□□ -0.24
RPAIN-207ENST00000570883 ATP13A3Q9H7F0 1226 aa13.54□□□□□ -0.24
RPAIN-207ENST00000570883 PCDH12Q9NPG4 1184 aa13.54□□□□□ -0.24
RPAIN-207ENST00000570883 DTLQ9NZJ0 730 aa13.54□□□□□ -0.24
RPAIN-207ENST00000570883 IMPACTQ9P2X3 320 aa13.54□□□□□ -0.24
RPAIN-207ENST00000570883 ALG6Q9Y672 507 aa13.54□□□□□ -0.24
RPAIN-207ENST00000570883 DUSP10Q9Y6W6 482 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms