RNA–Protein interactions for RNA: ENST00000570557.5

CHRNB1-203, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 5

Gene CHRNB1, Length 947 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-203ENST00000570557 IL21RQ9HBE5 538 aa13.12□□□□□ -0.31
CHRNB1-203ENST00000570557 KLHL11Q9NVR0 708 aa13.12□□□□□ -0.31
CHRNB1-203ENST00000570557 SNX11Q9Y5W9 270 aa13.12□□□□□ -0.31
CHRNB1-203ENST00000570557 ALG6Q9Y672 507 aa13.12□□□□□ -0.31
CHRNB1-203ENST00000570557 LRRK1Q38SD2 2015 aa13.12□□□□□ -0.31
CHRNB1-203ENST00000570557 PRAMEF26H0Y7S4 382 aa13.11□□□□□ -0.31
CHRNB1-203ENST00000570557 TRAFD1O14545 582 aaPredicted RBP13.11□□□□□ -0.31
CHRNB1-203ENST00000570557 PJA2O43164 708 aa13.11□□□□□ -0.31
CHRNB1-203ENST00000570557 TSPAN6O43657 245 aa13.11□□□□□ -0.31
CHRNB1-203ENST00000570557 OPHN1O60890 802 aa13.11□□□□□ -0.31
CHRNB1-203ENST00000570557 KCNK5O95279 499 aa13.11□□□□□ -0.31
CHRNB1-203ENST00000570557 MAT2AP31153 395 aaKnown RBP13.11□□□□□ -0.31
CHRNB1-203ENST00000570557 GJC1P36383 396 aa13.11□□□□□ -0.31
CHRNB1-203ENST00000570557 GARSP41250 739 aaKnown RBP13.11□□□□□ -0.31
CHRNB1-203ENST00000570557 RENBPP51606 427 aa13.11□□□□□ -0.31
CHRNB1-203ENST00000570557 SUOXP51687 545 aa13.11□□□□□ -0.31
CHRNB1-203ENST00000570557 ATXN3P54252 364 aaPredicted RBP13.11□□□□□ -0.31
CHRNB1-203ENST00000570557 RPS21P63220 83 aaKnown RBP13.11□□□□□ -0.31
CHRNB1-203ENST00000570557 SPA17Q15506 151 aa13.11□□□□□ -0.31
CHRNB1-203ENST00000570557 SLC9A4Q6AI14 798 aa13.11□□□□□ -0.31
CHRNB1-203ENST00000570557 KIAA1161Q6NSJ0 714 aa13.11□□□□□ -0.31
CHRNB1-203ENST00000570557 C11orf63Q6NUN7 778 aa13.11□□□□□ -0.31
CHRNB1-203ENST00000570557 ZSWIM9Q86XI8 627 aa13.11□□□□□ -0.31
CHRNB1-203ENST00000570557 RHOT1Q8IXI2 618 aa13.11□□□□□ -0.31
CHRNB1-203ENST00000570557 LENG8Q96PV6 779 aaPredicted RBP13.11□□□□□ -0.31
CHRNB1-203ENST00000570557 BAG1Q99933 345 aaPredicted RBP13.11□□□□□ -0.31
CHRNB1-203ENST00000570557 MGME1Q9BQP7 344 aa13.11□□□□□ -0.31
CHRNB1-203ENST00000570557 GAREM1Q9H706 876 aa13.11□□□□□ -0.31
CHRNB1-203ENST00000570557 GPR27Q9NS67 375 aa13.11□□□□□ -0.31
CHRNB1-203ENST00000570557 SEPT3Q9UH03 358 aa13.11□□□□□ -0.31
CHRNB1-203ENST00000570557 GGT7Q9UJ14 662 aa13.11□□□□□ -0.31
CHRNB1-203ENST00000570557 FNDC3AQ9Y2H6 1198 aaKnown RBP13.11□□□□□ -0.31
CHRNB1-203ENST00000570557 PCDHGB2Q9Y5G2 931 aa13.11□□□□□ -0.31
CHRNB1-203ENST00000570557 PCDH8O95206 1070 aa13.1□□□□□ -0.31
CHRNB1-203ENST00000570557 PIGNO95427 931 aa13.1□□□□□ -0.31
CHRNB1-203ENST00000570557 CER1O95813 267 aa13.1□□□□□ -0.31
CHRNB1-203ENST00000570557 CCNCP24863 283 aa13.1□□□□□ -0.31
CHRNB1-203ENST00000570557 HSPA9P38646 679 aaKnown RBP13.1□□□□□ -0.31
CHRNB1-203ENST00000570557 NXPH1P58417 271 aa13.1□□□□□ -0.31
CHRNB1-203ENST00000570557 AP1S1P61966 158 aa13.1□□□□□ -0.31
CHRNB1-203ENST00000570557 FOXK2Q01167 660 aa13.1□□□□□ -0.31
CHRNB1-203ENST00000570557 GBE1Q04446 702 aa13.1□□□□□ -0.31
CHRNB1-203ENST00000570557 OVGP1Q12889 678 aa13.1□□□□□ -0.31
CHRNB1-203ENST00000570557 HNRNPDQ14103 355 aaKnown RBP13.1□□□□□ -0.31
CHRNB1-203ENST00000570557 SHBQ15464 509 aa13.1□□□□□ -0.31
CHRNB1-203ENST00000570557 UAP1L1Q3KQV9 507 aa13.1□□□□□ -0.31
CHRNB1-203ENST00000570557 TMEM52BQ4KMG9 183 aa13.1□□□□□ -0.31
CHRNB1-203ENST00000570557 PPM1JQ5JR12 505 aa13.1□□□□□ -0.31
CHRNB1-203ENST00000570557 RALGPS1Q5JS13 557 aa13.1□□□□□ -0.31
CHRNB1-203ENST00000570557 ALG1LQ6GMV1 187 aa13.1□□□□□ -0.31
CHRNB1-203ENST00000570557 SPATS2Q86XZ4 545 aaKnown RBP13.1□□□□□ -0.31
CHRNB1-203ENST00000570557 CAMK1DQ8IU85 385 aa13.1□□□□□ -0.31
CHRNB1-203ENST00000570557 ATPAF2Q8N5M1 289 aa13.1□□□□□ -0.31
CHRNB1-203ENST00000570557 PLD5Q8N7P1 536 aa13.1□□□□□ -0.31
CHRNB1-203ENST00000570557 TPCN2Q8NHX9 752 aa13.1□□□□□ -0.31
CHRNB1-203ENST00000570557 FEM1CQ96JP0 617 aa13.1□□□□□ -0.31
CHRNB1-203ENST00000570557 CALR3Q96L12 384 aaKnown RBP13.1□□□□□ -0.31
CHRNB1-203ENST00000570557 NUDCD1Q96RS6 583 aa13.1□□□□□ -0.31
CHRNB1-203ENST00000570557 KLF6Q99612 283 aaPredicted RBP13.1□□□□□ -0.31
CHRNB1-203ENST00000570557 CINPQ9BW66 212 aaPredicted RBP13.1□□□□□ -0.31
CHRNB1-203ENST00000570557 SLC17A9Q9BYT1 436 aa13.1□□□□□ -0.31
CHRNB1-203ENST00000570557 LACRTQ9GZZ8 138 aa13.1□□□□□ -0.31
CHRNB1-203ENST00000570557 ERVMER34-1Q9H9K5 563 aa13.1□□□□□ -0.31
CHRNB1-203ENST00000570557 LUC7LQ9NQ29 371 aaKnown RBP13.1□□□□□ -0.31
CHRNB1-203ENST00000570557 DDX56Q9NY93 547 aaKnown RBP13.1□□□□□ -0.31
CHRNB1-203ENST00000570557 DTLQ9NZJ0 730 aa13.1□□□□□ -0.31
CHRNB1-203ENST00000570557 ITM2BQ9Y287 266 aa13.1□□□□□ -0.31
CHRNB1-203ENST00000570557 HYOU1Q9Y4L1 999 aa13.1□□□□□ -0.31
CHRNB1-203ENST00000570557 HS3ST3A1Q9Y663 406 aa13.1□□□□□ -0.31
CHRNB1-203ENST00000570557 DUSP10Q9Y6W6 482 aa13.1□□□□□ -0.31
CHRNB1-203ENST00000570557 MED19A0JLT2 244 aaPredicted RBP13.09□□□□□ -0.31
CHRNB1-203ENST00000570557 LRRD1A4D1F6 860 aa13.09□□□□□ -0.31
CHRNB1-203ENST00000570557 H0Y8X5 98 aa13.09□□□□□ -0.31
CHRNB1-203ENST00000570557 TLR4O00206 839 aa13.09□□□□□ -0.31
CHRNB1-203ENST00000570557 MATN3O15232 486 aa13.09□□□□□ -0.31
CHRNB1-203ENST00000570557 SLC31A1O15431 190 aa13.09□□□□□ -0.31
CHRNB1-203ENST00000570557 HTRA2O43464 458 aaPredicted RBP13.09□□□□□ -0.31
CHRNB1-203ENST00000570557 PSTPIP1O43586 416 aa13.09□□□□□ -0.31
CHRNB1-203ENST00000570557 DFNA5O60443 496 aa13.09□□□□□ -0.31
CHRNB1-203ENST00000570557 CBFA2T3O75081 653 aa13.09□□□□□ -0.31
CHRNB1-203ENST00000570557 CEACAM1P13688 526 aa13.09□□□□□ -0.31
CHRNB1-203ENST00000570557 PRLRP16471 622 aa13.09□□□□□ -0.31
CHRNB1-203ENST00000570557 ITIH2P19823 946 aa13.09□□□□□ -0.31
CHRNB1-203ENST00000570557 NOP2P46087 812 aaKnown RBP13.09□□□□□ -0.31
CHRNB1-203ENST00000570557 VAV2P52735 878 aa13.09□□□□□ -0.31
CHRNB1-203ENST00000570557 IFI16Q16666 785 aaKnown RBP13.09□□□□□ -0.31
CHRNB1-203ENST00000570557 UGP2Q16851 508 aa13.09□□□□□ -0.31
CHRNB1-203ENST00000570557 BRAT1Q6PJG6 821 aa13.09□□□□□ -0.31
CHRNB1-203ENST00000570557 ABI3BPQ7Z7G0 1075 aa13.09□□□□□ -0.31
CHRNB1-203ENST00000570557 TTC7BQ86TV6 843 aa13.09□□□□□ -0.31
CHRNB1-203ENST00000570557 ACRBPQ8NEB7 543 aa13.09□□□□□ -0.31
CHRNB1-203ENST00000570557 KLK6Q92876 244 aa13.09□□□□□ -0.31
CHRNB1-203ENST00000570557 HDAC11Q96DB2 347 aa13.09□□□□□ -0.31
CHRNB1-203ENST00000570557 BMFQ96LC9 184 aa13.09□□□□□ -0.31
CHRNB1-203ENST00000570557 OLFM3Q96PB7 478 aa13.09□□□□□ -0.31
CHRNB1-203ENST00000570557 GOLPH3Q9H4A6 298 aa13.09□□□□□ -0.31
CHRNB1-203ENST00000570557 ATP13A3Q9H7F0 1226 aa13.09□□□□□ -0.31
CHRNB1-203ENST00000570557 AASDHPPTQ9NRN7 309 aa13.09□□□□□ -0.31
CHRNB1-203ENST00000570557 TM7SF3Q9NS93 570 aa13.09□□□□□ -0.31
CHRNB1-203ENST00000570557 CA5BQ9Y2D0 317 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms