RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 DEFB106AQ8N104 65 aa10.58□□□□□ -0.72
CTDNEP1-202ENST00000570380 PCDH20Q8N6Y1 951 aaKnown RBP10.58□□□□□ -0.72
CTDNEP1-202ENST00000570380 RCBTB1Q8NDN9 531 aa10.58□□□□□ -0.72
CTDNEP1-202ENST00000570380 OR7D4Q8NG98 312 aa10.58□□□□□ -0.72
CTDNEP1-202ENST00000570380 APOBEC4Q8WW27 367 aaKnown RBP10.58□□□□□ -0.72
CTDNEP1-202ENST00000570380 KAT5Q92993 513 aa10.58□□□□□ -0.72
CTDNEP1-202ENST00000570380 VOPP1Q96AW1 172 aa10.58□□□□□ -0.72
CTDNEP1-202ENST00000570380 SLC4A5Q9BY07 1137 aa10.58□□□□□ -0.72
CTDNEP1-202ENST00000570380 CEP44Q9C0F1 390 aa10.58□□□□□ -0.72
CTDNEP1-202ENST00000570380 SIK2Q9H0K1 926 aa10.58□□□□□ -0.72
CTDNEP1-202ENST00000570380 THAP9Q9H5L6 903 aa10.58□□□□□ -0.72
CTDNEP1-202ENST00000570380 ZDHHC6Q9H6R6 413 aa10.58□□□□□ -0.72
CTDNEP1-202ENST00000570380 AKAP7Q9P0M2 348 aaPredicted RBP10.58□□□□□ -0.72
CTDNEP1-202ENST00000570380 LRIT1Q9P2V4 623 aa10.58□□□□□ -0.72
CTDNEP1-202ENST00000570380 PCDHA7Q9UN72 937 aa10.58□□□□□ -0.72
CTDNEP1-202ENST00000570380 TP53TG5Q9Y2B4 290 aa10.58□□□□□ -0.72
CTDNEP1-202ENST00000570380 B3GALT1Q9Y5Z6 326 aa10.58□□□□□ -0.72
CTDNEP1-202ENST00000570380 POLQO75417 2590 aa10.58□□□□□ -0.72
CTDNEP1-202ENST00000570380 E5RJQ4 531 aa10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 AREL1O15033 823 aa10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 CAPN5O15484 640 aaPredicted RBP10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 RAD1O60671 282 aa10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 MMP20O60882 483 aa10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 VPS4BO75351 444 aa10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 ZMPSTE24O75844 475 aa10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 TM7SF2O76062 418 aa10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 ADCY5O95622 1261 aa10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 CPNE6O95741 557 aa10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 TNFRSF8P28908 595 aa10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 OAS2P29728 719 aaKnown RBP10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 SERPINH1P50454 418 aaKnown RBP10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 PEX5P50542 639 aa10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 SRP54P61011 504 aaKnown RBP10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 CDK17Q00537 523 aa10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 CDC20Q12834 499 aa10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 ARHGEF7Q14155 803 aa10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 HLTFQ14527 1009 aaKnown RBP eCLIP10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 IRF4Q15306 451 aa10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 DEFB109BQ30KR1 87 aa10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 MAP9Q49MG5 647 aa10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 C14orf28Q4W4Y0 310 aa10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 DCAF17Q5H9S7 520 aaPredicted RBP10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 LRRC73Q5JTD7 316 aa10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 TCERG1LQ5VWI1 586 aa10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 DENND1BQ6P3S1 775 aa10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 TMEM110Q86TL2 294 aa10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 SETD3Q86TU7 594 aaPredicted RBP10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 PIM3Q86V86 326 aa10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 ZNF683Q8IZ20 524 aa10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 GUF1Q8N442 669 aaKnown RBP10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 TEX19Q8NA77 164 aa10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 GALNT11Q8NCW6 608 aa10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 FAM46DQ8NEK8 389 aa10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 ZNF396Q96N95 335 aaPredicted RBP10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 PHF12Q96QT6 1004 aa10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 MED15Q96RN5 788 aa10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 RBM15Q96T37 977 aaKnown RBP eCLIP10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 ANLNQ9NQW6 1124 aa10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 HECAQ9UBI9 543 aaPredicted RBP10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 VPS4AQ9UN37 437 aa10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 FCF1Q9Y324 198 aaKnown RBP10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 ACTL7AQ9Y615 435 aa10.57□□□□□ -0.72
CTDNEP1-202ENST00000570380 IGHV5-10-1A0A0J9YXX1 117 aa10.56□□□□□ -0.72
CTDNEP1-202ENST00000570380 I6L893 689 aaPredicted RBP10.56□□□□□ -0.72
CTDNEP1-202ENST00000570380 HGSO14964 777 aaPredicted RBP10.56□□□□□ -0.72
CTDNEP1-202ENST00000570380 NUDT21O43809 227 aaKnown RBP10.56□□□□□ -0.72
CTDNEP1-202ENST00000570380 RHOBTB3O94955 611 aa10.56□□□□□ -0.72
CTDNEP1-202ENST00000570380 CD160O95971 181 aa10.56□□□□□ -0.72
CTDNEP1-202ENST00000570380 EPB41P11171 864 aaKnown RBP10.56□□□□□ -0.72
CTDNEP1-202ENST00000570380 ITIH2P19823 946 aa10.56□□□□□ -0.72
CTDNEP1-202ENST00000570380 ELAVL4P26378 380 aaKnown RBP10.56□□□□□ -0.72
CTDNEP1-202ENST00000570380 OR1D5P58170 312 aa10.56□□□□□ -0.72
CTDNEP1-202ENST00000570380 ARF5P84085 180 aa10.56□□□□□ -0.72
CTDNEP1-202ENST00000570380 NFATC4Q14934 902 aa10.56□□□□□ -0.72
CTDNEP1-202ENST00000570380 KLHL40Q2TBA0 621 aa10.56□□□□□ -0.72
CTDNEP1-202ENST00000570380 EDRF1Q3B7T1 1238 aa10.56□□□□□ -0.72
CTDNEP1-202ENST00000570380 AMZ1Q400G9 498 aa10.56□□□□□ -0.72
CTDNEP1-202ENST00000570380 ZNF805Q5CZA5 627 aa10.56□□□□□ -0.72
CTDNEP1-202ENST00000570380 RETSATQ6NUM9 610 aa10.56□□□□□ -0.72
CTDNEP1-202ENST00000570380 TFAP2DQ7Z6R9 452 aa10.56□□□□□ -0.72
CTDNEP1-202ENST00000570380 HEATR4Q86WZ0 1026 aa10.56□□□□□ -0.72
CTDNEP1-202ENST00000570380 OR6K2Q8NGY2 324 aa10.56□□□□□ -0.72
CTDNEP1-202ENST00000570380 STK32AQ8WU08 396 aa10.56□□□□□ -0.72
CTDNEP1-202ENST00000570380 ART4Q93070 314 aa10.56□□□□□ -0.72
CTDNEP1-202ENST00000570380 CCDC74BQ96LY2 380 aa10.56□□□□□ -0.72
CTDNEP1-202ENST00000570380 SLC2A13Q96QE2 648 aa10.56□□□□□ -0.72
CTDNEP1-202ENST00000570380 NUDT22Q9BRQ3 303 aa10.56□□□□□ -0.72
CTDNEP1-202ENST00000570380 SPON2Q9BUD6 331 aa10.56□□□□□ -0.72
CTDNEP1-202ENST00000570380 DDA1Q9BW61 102 aa10.56□□□□□ -0.72
CTDNEP1-202ENST00000570380 C1QTNF7Q9BXJ2 289 aa10.56□□□□□ -0.72
CTDNEP1-202ENST00000570380 TM6SF2Q9BZW4 377 aa10.56□□□□□ -0.72
CTDNEP1-202ENST00000570380 GPN2Q9H9Y4 310 aaPredicted RBP10.56□□□□□ -0.72
CTDNEP1-202ENST00000570380 PRDM8Q9NQV8 689 aa10.56□□□□□ -0.72
CTDNEP1-202ENST00000570380 CUEDC1Q9NWM3 386 aaPredicted RBP10.56□□□□□ -0.72
CTDNEP1-202ENST00000570380 MPP6Q9NZW5 540 aa10.56□□□□□ -0.72
CTDNEP1-202ENST00000570380 SNX10Q9Y5X0 201 aa10.56□□□□□ -0.72
CTDNEP1-202ENST00000570380 LOC101059948A0A1B0GTJ6 334 aa10.55□□□□□ -0.72
CTDNEP1-202ENST00000570380 DRGXA6NNA5 263 aa10.55□□□□□ -0.72
CTDNEP1-202ENST00000570380 EFCAB7A8K855 629 aa10.55□□□□□ -0.72
CTDNEP1-202ENST00000570380 TMEM110-MUSTN1A8MSY1 372 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms