RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 FBXO39Q8N4B4 442 aa6.05□□□□□ -1.44
CDH13-212ENST00000569144 ZNF548Q8NEK5 533 aaPredicted RBP6.05□□□□□ -1.44
CDH13-212ENST00000569144 FIBINQ8TAL6 211 aa6.05□□□□□ -1.44
CDH13-212ENST00000569144 PTPRN2Q92932 1015 aa6.05□□□□□ -1.44
CDH13-212ENST00000569144 NKD1Q969G9 470 aa6.05□□□□□ -1.44
CDH13-212ENST00000569144 CALN1Q9BXU9 219 aa6.05□□□□□ -1.44
CDH13-212ENST00000569144 PREBQ9HCU5 417 aa6.05□□□□□ -1.44
CDH13-212ENST00000569144 OLA1Q9NTK5 396 aaKnown RBP6.05□□□□□ -1.44
CDH13-212ENST00000569144 PANK4Q9NVE7 773 aa6.05□□□□□ -1.44
CDH13-212ENST00000569144 CCDC39Q9UFE4 941 aa6.05□□□□□ -1.44
CDH13-212ENST00000569144 INTS6Q9UL03 887 aaKnown RBP6.05□□□□□ -1.44
CDH13-212ENST00000569144 MAPK8IP1Q9UQF2 711 aa6.05□□□□□ -1.44
CDH13-212ENST00000569144 CSNK1G3Q9Y6M4 447 aa6.05□□□□□ -1.44
CDH13-212ENST00000569144 TMX2-CTNND1H3BSU7 103 aa6.04□□□□□ -1.44
CDH13-212ENST00000569144 NTN3O00634 580 aaPredicted RBP6.04□□□□□ -1.44
CDH13-212ENST00000569144 SLC31A1O15431 190 aa6.04□□□□□ -1.44
CDH13-212ENST00000569144 IRAK2O43187 625 aa6.04□□□□□ -1.44
CDH13-212ENST00000569144 DNAJA2O60884 412 aa6.04□□□□□ -1.44
CDH13-212ENST00000569144 KIF20AO95235 890 aa6.04□□□□□ -1.44
CDH13-212ENST00000569144 VNN1O95497 513 aa6.04□□□□□ -1.44
CDH13-212ENST00000569144 CSF2P04141 144 aa6.04□□□□□ -1.44
CDH13-212ENST00000569144 WT1P19544 449 aaPredicted RBP6.04□□□□□ -1.44
CDH13-212ENST00000569144 AKT2P31751 481 aa6.04□□□□□ -1.44
CDH13-212ENST00000569144 METAP1P53582 386 aa6.04□□□□□ -1.44
CDH13-212ENST00000569144 POLE2P56282 527 aa6.04□□□□□ -1.44
CDH13-212ENST00000569144 SNRPFP62306 86 aaKnown RBP6.04□□□□□ -1.44
CDH13-212ENST00000569144 ECT2LQ008S8 904 aa6.04□□□□□ -1.44
CDH13-212ENST00000569144 INCA1Q0VD86 236 aa6.04□□□□□ -1.44
CDH13-212ENST00000569144 SPIDRQ14159 915 aa6.04□□□□□ -1.44
CDH13-212ENST00000569144 SGSM1Q2NKQ1 1148 aa6.04□□□□□ -1.44
CDH13-212ENST00000569144 PITRM1Q5JRX3 1037 aa6.04□□□□□ -1.44
CDH13-212ENST00000569144 RAB41Q5JT25 222 aa6.04□□□□□ -1.44
CDH13-212ENST00000569144 SFRP5Q5T4F7 317 aa6.04□□□□□ -1.44
CDH13-212ENST00000569144 PIK3R6Q5UE93 754 aa6.04□□□□□ -1.44
CDH13-212ENST00000569144 AGBL4Q5VU57 503 aa6.04□□□□□ -1.44
CDH13-212ENST00000569144 FAM46CQ5VWP2 391 aa6.04□□□□□ -1.44
CDH13-212ENST00000569144 RNF219Q5W0B1 726 aaPredicted RBP6.04□□□□□ -1.44
CDH13-212ENST00000569144 BORAQ6PGQ7 559 aa6.04□□□□□ -1.44
CDH13-212ENST00000569144 GK5Q6ZS86 529 aa6.04□□□□□ -1.44
CDH13-212ENST00000569144 ABI3BPQ7Z7G0 1075 aa6.04□□□□□ -1.44
CDH13-212ENST00000569144 VASH2Q86V25 355 aa6.04□□□□□ -1.44
CDH13-212ENST00000569144 DCP2Q8IU60 420 aaKnown RBP6.04□□□□□ -1.44
CDH13-212ENST00000569144 SLC22A18ASQ8N1D0 253 aa6.04□□□□□ -1.44
CDH13-212ENST00000569144 XXYLT1Q8NBI6 393 aa6.04□□□□□ -1.44
CDH13-212ENST00000569144 TAF4BQ92750 862 aa6.04□□□□□ -1.44
CDH13-212ENST00000569144 NAT6Q93015 286 aa6.04□□□□□ -1.44
CDH13-212ENST00000569144 MIB2Q96AX9 1013 aa6.04□□□□□ -1.44
CDH13-212ENST00000569144 EPSTI1Q96J88 318 aa6.04□□□□□ -1.44
CDH13-212ENST00000569144 ZSCAN31Q96LW9 406 aaPredicted RBP6.04□□□□□ -1.44
CDH13-212ENST00000569144 SPAG5Q96R06 1193 aa6.04□□□□□ -1.44
CDH13-212ENST00000569144 TWNKQ96RR1 684 aa6.04□□□□□ -1.44
CDH13-212ENST00000569144 MYOCQ99972 504 aa6.04□□□□□ -1.44
CDH13-212ENST00000569144 SRRTQ9BXP5 876 aaKnown RBP6.04□□□□□ -1.44
CDH13-212ENST00000569144 DUSP16Q9BY84 665 aa6.04□□□□□ -1.44
CDH13-212ENST00000569144 UBXN6Q9BZV1 441 aa6.04□□□□□ -1.44
CDH13-212ENST00000569144 CAAP1Q9H8G2 361 aa6.04□□□□□ -1.44
CDH13-212ENST00000569144 AGPAT3Q9NRZ7 376 aa6.04□□□□□ -1.44
CDH13-212ENST00000569144 GPR27Q9NS67 375 aa6.04□□□□□ -1.44
CDH13-212ENST00000569144 DNAJC28Q9NX36 388 aa6.04□□□□□ -1.44
CDH13-212ENST00000569144 PLAAQ9Y263 795 aa6.04□□□□□ -1.44
CDH13-212ENST00000569144 TLN1Q9Y490 2541 aaKnown RBP6.03□□□□□ -1.44
CDH13-212ENST00000569144 SPENQ96T58 3664 aaKnown RBP6.03□□□□□ -1.44
CDH13-212ENST00000569144 TYW5A2RUC4 315 aaKnown RBP6.03□□□□□ -1.44
CDH13-212ENST00000569144 A6NNZ2 444 aa6.03□□□□□ -1.44
CDH13-212ENST00000569144 C1QTNF3-AMACRE9PGA6 284 aa6.03□□□□□ -1.44
CDH13-212ENST00000569144 TPP1O14773 563 aa6.03□□□□□ -1.44
CDH13-212ENST00000569144 MUSKO15146 869 aa6.03□□□□□ -1.44
CDH13-212ENST00000569144 EIF3DO15371 548 aaKnown RBP eCLIP6.03□□□□□ -1.44
CDH13-212ENST00000569144 TGFB1I1O43294 461 aa6.03□□□□□ -1.44
CDH13-212ENST00000569144 AQP9O43315 295 aa6.03□□□□□ -1.44
CDH13-212ENST00000569144 MOCS3O95396 460 aa6.03□□□□□ -1.44
CDH13-212ENST00000569144 C4BPAP04003 597 aaKnown RBP6.03□□□□□ -1.44
CDH13-212ENST00000569144 JMJD7P0C870 316 aa6.03□□□□□ -1.44
CDH13-212ENST00000569144 NME1P15531 152 aaKnown RBP6.03□□□□□ -1.44
CDH13-212ENST00000569144 PRLRP16471 622 aa6.03□□□□□ -1.44
CDH13-212ENST00000569144 POU3F2P20265 443 aaPredicted RBP6.03□□□□□ -1.44
CDH13-212ENST00000569144 HNRNPA2B1P22626 353 aaKnown RBP6.03□□□□□ -1.44
CDH13-212ENST00000569144 ELAVL4P26378 380 aaKnown RBP6.03□□□□□ -1.44
CDH13-212ENST00000569144 SLC6A4P31645 630 aa6.03□□□□□ -1.44
CDH13-212ENST00000569144 HOXD13P35453 343 aa6.03□□□□□ -1.44
CDH13-212ENST00000569144 NNMTP40261 264 aa6.03□□□□□ -1.44
CDH13-212ENST00000569144 CASP4P49662 377 aa6.03□□□□□ -1.44
CDH13-212ENST00000569144 ZNF165P49910 485 aa6.03□□□□□ -1.44
CDH13-212ENST00000569144 CYP2J2P51589 502 aa6.03□□□□□ -1.44
CDH13-212ENST00000569144 GP2P55259 537 aaKnown RBP6.03□□□□□ -1.44
CDH13-212ENST00000569144 TAS2R38P59533 333 aa6.03□□□□□ -1.44
CDH13-212ENST00000569144 CLCQ05315 142 aa6.03□□□□□ -1.44
CDH13-212ENST00000569144 CNTN1Q12860 1018 aa6.03□□□□□ -1.44
CDH13-212ENST00000569144 CDH18Q13634 790 aa6.03□□□□□ -1.44
CDH13-212ENST00000569144 DRAP1Q14919 205 aaPredicted RBP6.03□□□□□ -1.44
CDH13-212ENST00000569144 ZNF284Q2VY69 593 aa6.03□□□□□ -1.44
CDH13-212ENST00000569144 DEFB133Q30KQ1 61 aa6.03□□□□□ -1.44
CDH13-212ENST00000569144 FAM133BQ5BKY9 247 aaKnown RBP6.03□□□□□ -1.44
CDH13-212ENST00000569144 ZNF542PQ5EBM4 170 aa6.03□□□□□ -1.44
CDH13-212ENST00000569144 RRAGBQ5VZM2 374 aa6.03□□□□□ -1.44
CDH13-212ENST00000569144 PM20D1Q6GTS8 502 aa6.03□□□□□ -1.44
CDH13-212ENST00000569144 NEK5Q6P3R8 708 aa6.03□□□□□ -1.44
CDH13-212ENST00000569144 RFWD3Q6PCD5 774 aa6.03□□□□□ -1.44
CDH13-212ENST00000569144 GCNT7Q6ZNI0 430 aa6.03□□□□□ -1.44
CDH13-212ENST00000569144 BHLHA9Q7RTU4 235 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms