RNA–Protein interactions for RNA: ENST00000568883.5

PKM-222, Transcript of pyruvate kinase M1/2, human

TSL 5 BASIC

Gene PKM, Length 1,863 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-222	ENST00000568883	MRPL1	Q9BYD6	325 aa	Known RBP	12.79	□□□□□ -0.36
PKM-222	ENST00000568883	FBXO44	Q9H4M3	255 aa		12.79	□□□□□ -0.36
PKM-222	ENST00000568883	EBF3	Q9H4W6	596 aa		12.79	□□□□□ -0.36
PKM-222	ENST00000568883	WDR41	Q9HAD4	459 aa		12.79	□□□□□ -0.36
PKM-222	ENST00000568883	SLC24A3	Q9HC58	644 aa		12.79	□□□□□ -0.36
PKM-222	ENST00000568883	TMLHE	Q9NVH6	421 aa		12.79	□□□□□ -0.36
PKM-222	ENST00000568883	GTSE1	Q9NYZ3	720 aa		12.79	□□□□□ -0.36
PKM-222	ENST00000568883	PCDHB8	Q9UN66	801 aa		12.79	□□□□□ -0.36
PKM-222	ENST00000568883	TLR6	Q9Y2C9	796 aa		12.79	□□□□□ -0.36
PKM-222	ENST00000568883		H3BNX3	289 aa		12.78	□□□□□ -0.36
PKM-222	ENST00000568883	PENK	P01210	267 aa	Predicted RBP	12.78	□□□□□ -0.36
PKM-222	ENST00000568883	HSPA1A	P0DMV8	641 aa	Known RBP	12.78	□□□□□ -0.36
PKM-222	ENST00000568883	HSPA1B	P0DMV9	641 aa	Known RBP	12.78	□□□□□ -0.36
PKM-222	ENST00000568883	RHOQ	P17081	205 aa		12.78	□□□□□ -0.36
PKM-222	ENST00000568883	PEX2	P28328	305 aa		12.78	□□□□□ -0.36
PKM-222	ENST00000568883	ALDH1A3	P47895	512 aa		12.78	□□□□□ -0.36
PKM-222	ENST00000568883	LEPR	P48357	1165 aa	Known RBP	12.78	□□□□□ -0.36
PKM-222	ENST00000568883	MLLT6	P55198	1093 aa	Predicted RBP	12.78	□□□□□ -0.36
PKM-222	ENST00000568883	PEX6	Q13608	980 aa		12.78	□□□□□ -0.36
PKM-222	ENST00000568883	ITGA7	Q13683	1181 aa		12.78	□□□□□ -0.36
PKM-222	ENST00000568883	ACAP2	Q15057	778 aa		12.78	□□□□□ -0.36
PKM-222	ENST00000568883	PIGG	Q5H8A4	983 aa		12.78	□□□□□ -0.36
PKM-222	ENST00000568883	TSTD2	Q5T7W7	516 aa		12.78	□□□□□ -0.36
PKM-222	ENST00000568883	LPCAT4	Q643R3	524 aa		12.78	□□□□□ -0.36
PKM-222	ENST00000568883	MON1A	Q86VX9	555 aa		12.78	□□□□□ -0.36
PKM-222	ENST00000568883	UMODL1-AS1	Q8N2C9	162 aa		12.78	□□□□□ -0.36
PKM-222	ENST00000568883	KDM1B	Q8NB78	822 aa		12.78	□□□□□ -0.36
PKM-222	ENST00000568883	HEXDC	Q8WVB3	486 aa		12.78	□□□□□ -0.36
PKM-222	ENST00000568883	CASP10	Q92851	521 aa		12.78	□□□□□ -0.36
PKM-222	ENST00000568883	RCN3	Q96D15	328 aa		12.78	□□□□□ -0.36
PKM-222	ENST00000568883	FTHL17	Q9BXU8	183 aa		12.78	□□□□□ -0.36
PKM-222	ENST00000568883	TRPC7	Q9HCX4	862 aa		12.78	□□□□□ -0.36
PKM-222	ENST00000568883	SFMBT1	Q9UHJ3	866 aa		12.78	□□□□□ -0.36
PKM-222	ENST00000568883	PADI3	Q9ULW8	664 aa		12.78	□□□□□ -0.36
PKM-222	ENST00000568883	HS3ST4	Q9Y661	456 aa		12.78	□□□□□ -0.36
PKM-222	ENST00000568883	TNFRSF10B	O14763	440 aa		12.78	□□□□□ -0.36
PKM-222	ENST00000568883	SLC7A4	O43246	635 aa		12.78	□□□□□ -0.36
PKM-222	ENST00000568883	IPO13	O94829	963 aa	Known RBP	12.78	□□□□□ -0.36
PKM-222	ENST00000568883	MOCS2	O96007	188 aa	Predicted RBP	12.78	□□□□□ -0.36
PKM-222	ENST00000568883	IGHA2	P01877	340 aa		12.78	□□□□□ -0.36
PKM-222	ENST00000568883	VCL	P18206	1134 aa		12.78	□□□□□ -0.36
PKM-222	ENST00000568883	APLP1	P51693	650 aa		12.78	□□□□□ -0.36
PKM-222	ENST00000568883	PFKP	Q01813	784 aa		12.78	□□□□□ -0.36
PKM-222	ENST00000568883	SQLE	Q14534	574 aa		12.78	□□□□□ -0.36
PKM-222	ENST00000568883	ZNF423	Q2M1K9	1284 aa		12.78	□□□□□ -0.36
PKM-222	ENST00000568883	PAN2	Q504Q3	1202 aa	Known RBP	12.78	□□□□□ -0.36
PKM-222	ENST00000568883	SFT2D3	Q587I9	215 aa		12.78	□□□□□ -0.36
PKM-222	ENST00000568883	TECRL	Q5HYJ1	363 aa		12.78	□□□□□ -0.36
PKM-222	ENST00000568883	MARC1	Q5VT66	337 aa		12.78	□□□□□ -0.36
PKM-222	ENST00000568883	RNF220	Q5VTB9	566 aa		12.78	□□□□□ -0.36
PKM-222	ENST00000568883	MSANTD2	Q6P1R3	559 aa		12.78	□□□□□ -0.36
PKM-222	ENST00000568883	KDELC1	Q6UW63	502 aa		12.78	□□□□□ -0.36
PKM-222	ENST00000568883	CXCL17	Q6UXB2	119 aa		12.78	□□□□□ -0.36
PKM-222	ENST00000568883	LRRTM3	Q86VH5	581 aa		12.78	□□□□□ -0.36
PKM-222	ENST00000568883	TOP1MT	Q969P6	601 aa		12.78	□□□□□ -0.36
PKM-222	ENST00000568883	IMP4	Q96G21	291 aa	Known RBP	12.78	□□□□□ -0.36
PKM-222	ENST00000568883	PPP1R36	Q96LQ0	422 aa		12.78	□□□□□ -0.36
PKM-222	ENST00000568883	OMD	Q99983	421 aa		12.78	□□□□□ -0.36
PKM-222	ENST00000568883	UPF3A	Q9H1J1	476 aa	Known RBP	12.78	□□□□□ -0.36
PKM-222	ENST00000568883	PAPOLB	Q9NRJ5	636 aa	Known RBP	12.78	□□□□□ -0.36
PKM-222	ENST00000568883	OSER1	Q9NX31	292 aa		12.78	□□□□□ -0.36
PKM-222	ENST00000568883	SLC2A6	Q9UGQ3	507 aa		12.78	□□□□□ -0.36
PKM-222	ENST00000568883	COPG1	Q9Y678	874 aa	Known RBP	12.78	□□□□□ -0.36
PKM-222	ENST00000568883	MYO18A	Q92614	2054 aa	Known RBP	12.77	□□□□□ -0.36
PKM-222	ENST00000568883	MSI1	O43347	362 aa	Known RBP	12.77	□□□□□ -0.37
PKM-222	ENST00000568883	ZCCHC18	P0CG32	403 aa		12.77	□□□□□ -0.37
PKM-222	ENST00000568883	ENO3	P13929	434 aa	Predicted RBP	12.77	□□□□□ -0.37
PKM-222	ENST00000568883	CD52	P31358	61 aa		12.77	□□□□□ -0.37
PKM-222	ENST00000568883	THPO	P40225	353 aa		12.77	□□□□□ -0.37
PKM-222	ENST00000568883	AQP4	P55087	323 aa		12.77	□□□□□ -0.37
PKM-222	ENST00000568883	MTA1	Q13330	715 aa		12.77	□□□□□ -0.37
PKM-222	ENST00000568883	CSHL1	Q14406	222 aa		12.77	□□□□□ -0.37
PKM-222	ENST00000568883	DSC3	Q14574	896 aa		12.77	□□□□□ -0.37
PKM-222	ENST00000568883	ZNF460	Q14592	562 aa		12.77	□□□□□ -0.37
PKM-222	ENST00000568883	SLC14A2	Q15849	920 aa		12.77	□□□□□ -0.37
PKM-222	ENST00000568883	NFE2	Q16621	373 aa	Predicted RBP	12.77	□□□□□ -0.37
PKM-222	ENST00000568883	LRRC36	Q1X8D7	754 aa		12.77	□□□□□ -0.37
PKM-222	ENST00000568883	PPM1L	Q5SGD2	360 aa		12.77	□□□□□ -0.37
PKM-222	ENST00000568883	MFSD14C	Q5VZR4	134 aa		12.77	□□□□□ -0.37
PKM-222	ENST00000568883	C17orf99	Q6UX52	265 aa		12.77	□□□□□ -0.37
PKM-222	ENST00000568883	MFSD6L	Q8IWD5	586 aa		12.77	□□□□□ -0.37
PKM-222	ENST00000568883	TXNDC5	Q8NBS9	432 aa	Known RBP	12.77	□□□□□ -0.37
PKM-222	ENST00000568883	ADCY4	Q8NFM4	1077 aa		12.77	□□□□□ -0.37
PKM-222	ENST00000568883	RIN3	Q8TB24	985 aa		12.77	□□□□□ -0.37
PKM-222	ENST00000568883	ZFAND2B	Q8WV99	257 aa		12.77	□□□□□ -0.37
PKM-222	ENST00000568883	FUBP3	Q96I24	572 aa	Known RBP eCLIP	12.77	□□□□□ -0.37
PKM-222	ENST00000568883	TUBGCP5	Q96RT8	1024 aa		12.77	□□□□□ -0.37
PKM-222	ENST00000568883	ZYG11B	Q9C0D3	744 aa		12.77	□□□□□ -0.37
PKM-222	ENST00000568883	AGO3	Q9H9G7	860 aa	Known RBP	12.77	□□□□□ -0.37
PKM-222	ENST00000568883	SP110	Q9HB58	689 aa		12.77	□□□□□ -0.37
PKM-222	ENST00000568883	ATP13A1	Q9HD20	1204 aa		12.77	□□□□□ -0.37
PKM-222	ENST00000568883	IGSF5	Q9NSI5	407 aa		12.77	□□□□□ -0.37
PKM-222	ENST00000568883	NDUFA13	Q9P0J0	144 aa		12.77	□□□□□ -0.37
PKM-222	ENST00000568883	RAB26	Q9ULW5	256 aa		12.77	□□□□□ -0.37
PKM-222	ENST00000568883	G3BP2	Q9UN86	482 aa	Known RBP	12.77	□□□□□ -0.37
PKM-222	ENST00000568883	SCML2	Q9UQR0	700 aa		12.77	□□□□□ -0.37
PKM-222	ENST00000568883	INPP5F	Q9Y2H2	1132 aa		12.77	□□□□□ -0.37
PKM-222	ENST00000568883	MYADML2	A6NDP7	307 aa		12.76	□□□□□ -0.37
PKM-222	ENST00000568883	TRIM38	O00635	465 aa		12.76	□□□□□ -0.37
PKM-222	ENST00000568883	SDHD	O14521	159 aa		12.76	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms